| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is hemB [H]
Identifier: 113477157
GI number: 113477157
Start: 5658430
End: 5658603
Strand: Reverse
Name: hemB [H]
Synonym: Tery_3684
Alternate gene names: 113477157
Gene position: 5658603-5658430 (Counterclockwise)
Preceding gene: 113477158
Following gene: 113477154
Centisome position: 73.01
GC content: 41.38
Gene sequence:
>174_bases ATGCCAATGCCAGGGGTATATCAGCTCTCAGTAGATAAAATTGTTGAGGAAGCAAAGGAAGTCTATGACTTGGGAATTCC TGGAGTTATCTTGTTTGGCATCTCTGATGATAAAGAACTGAAGCTATGGGGACTTTGCATGCAAGGTCCCTACAATTTTT TGGTTGTGATGTGA
Upstream 100 bases:
>100_bases TAATCAAAAGGTCATACAACTAGCCTCAAAGATTATGAAAAGCTCTTTGCCTATGAACAGCTCTTTCCGAAAAAAGGAGG GATACTAAGCATATTGGTTA
Downstream 100 bases:
>100_bases AGCTCATGGGGTAACAAACTTGTAGGTAGGGCTTTAACTCTAATAAAAACCATCTAGTTTTTTATCCCTTTAATTATATA CTAATTCCCATGCATTAATG
Product: Delta-aminolevulinic acid dehydratase-like protein
Products: NA
Alternate protein names: ALAD; ALADH; Porphobilinogen synthase [H]
Number of amino acids: Translated: 57; Mature: 56
Protein sequence:
>57_residues MPMPGVYQLSVDKIVEEAKEVYDLGIPGVILFGISDDKELKLWGLCMQGPYNFLVVM
Sequences:
>Translated_57_residues MPMPGVYQLSVDKIVEEAKEVYDLGIPGVILFGISDDKELKLWGLCMQGPYNFLVVM >Mature_56_residues PMPGVYQLSVDKIVEEAKEVYDLGIPGVILFGISDDKELKLWGLCMQGPYNFLVVM
Specific function: Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen [H]
COG id: COG0113
COG function: function code H; Delta-aminolevulinic acid dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ALADH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001731 - InterPro: IPR013785 [H]
Pfam domain/function: PF00490 ALAD [H]
EC number: =4.2.1.24 [H]
Molecular weight: Translated: 6391; Mature: 6259
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMPGVYQLSVDKIVEEAKEVYDLGIPGVILFGISDDKELKLWGLCMQGPYNFLVVM CCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEC >Mature Secondary Structure PMPGVYQLSVDKIVEEAKEVYDLGIPGVILFGISDDKELKLWGLCMQGPYNFLVVM CCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8123787 [H]