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The map label for this gene is med [H]

Identifier: 113477147

GI number: 113477147

Start: 5637974

End: 5639041

Strand: Reverse

Name: med [H]

Synonym: Tery_3674

Alternate gene names: 113477147

Gene position: 5639041-5637974 (Counterclockwise)

Preceding gene: 113477151

Following gene: 113477146

Centisome position: 72.76

GC content: 34.46

Gene sequence:

>1068_bases
ATGAATAAAAAATTAAATAGACGTTCATTTCTTGGCTATATGTCAACAGCCTTAGCAATTAGCTTCTTATTAAAAGCTTG
TACTAATTCTGCTTCTAAAACCACAGAAAATTCCGATAATAATTTTATATACTCCGGTAGTAGTTCTGAAACCTTTAAAA
TTGCCATTGCTTTGCCGGGAGTTATAACCGATGGAGGATGGAATCAATCTGGTTATGAAGGAGTCAAAAAAGCAGCCGAA
AAACTCAATGCTGAGATGATTTATGTAGAAAATGTTGTTCAAGCAGACCAAACAGAAACCATCTCAGACTTTGCCAGGAA
AGGTTATAATTTAGTAATTGGTCATGGAGGGCAATTTGATGCTGCTATTGAACAAATAGCTAGTCAATTTCCAGGTACAT
TTTTTTTAGGAGTTAATGGTAATATTGCCGGAGAAAATTATGCTTCAGTAACAACAAATTACTTCCAAGTTGGTTATCTT
GCTGGTGTTGTTGCTGGCTTGATGACTGAAACTAATAAAGTTGCTTATCTTACTGGTTTATCTTTTAAGGGAACTAACCT
ACAAGGTCGGGCATTTGAGTTAGGAGCTAAGTCTGTAAATTCTATAGTTGAAGTCGTCATTAGTTACACTGGAGACTTTA
ATGATATTGCCAAAGGAAAAGAAGCAGCTTTAGCCTTAATTTCCACAGGAGTTGATGTAATTTATCACTTATTAGATAAT
GCCGCTCCGGCAGTTTTACAAACTGCACAAGAACAAGGAATTTATGCAGTGGGTAATACTACAGATCAGTTAGATATTGC
TCCAAAAGCAGTTCTAACCAGTGCAGTTCAGAATGTGGGAGAAGCGATCGCCTATATTGCTAATTTAGCCAAAAACAATC
AACTTAAAGGAGAAAAATATATTTTAGGAATTGAAAACCCAGAAATTACTAAATTAGGTCGTTTCAATAATATTGTGCCA
GATAAAATCAAGCAAATAGTAGAAAAAAGTCAGCAGAAAATATTAACTGGAAAGTTGCAATTTGAAGACTGTTCAGAAAA
TGGTGAAGAACAAGTTTGTTTTAAATAA

Upstream 100 bases:

>100_bases
TACAAATACTATTTTAGATAGTCAAAAAAACCAACAATAGTAAATATTTTCTGGTTCCTAACTCCACCGTAAATTATTAT
ATTTAGAGGAATATTAAAAT

Downstream 100 bases:

>100_bases
AATCCCGAATAATTAGGAATAAAAATACAAATACAATTGCAAAGAATAATTTGTAGTAATTACCCTTGCAAAAAGGGTTC
TATAATAACAAAAATCTGCA

Product: basic membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNKKLNRRSFLGYMSTALAISFLLKACTNSASKTTENSDNNFIYSGSSSETFKIAIALPGVITDGGWNQSGYEGVKKAAE
KLNAEMIYVENVVQADQTETISDFARKGYNLVIGHGGQFDAAIEQIASQFPGTFFLGVNGNIAGENYASVTTNYFQVGYL
AGVVAGLMTETNKVAYLTGLSFKGTNLQGRAFELGAKSVNSIVEVVISYTGDFNDIAKGKEAALALISTGVDVIYHLLDN
AAPAVLQTAQEQGIYAVGNTTDQLDIAPKAVLTSAVQNVGEAIAYIANLAKNNQLKGEKYILGIENPEITKLGRFNNIVP
DKIKQIVEKSQQKILTGKLQFEDCSENGEEQVCFK

Sequences:

>Translated_355_residues
MNKKLNRRSFLGYMSTALAISFLLKACTNSASKTTENSDNNFIYSGSSSETFKIAIALPGVITDGGWNQSGYEGVKKAAE
KLNAEMIYVENVVQADQTETISDFARKGYNLVIGHGGQFDAAIEQIASQFPGTFFLGVNGNIAGENYASVTTNYFQVGYL
AGVVAGLMTETNKVAYLTGLSFKGTNLQGRAFELGAKSVNSIVEVVISYTGDFNDIAKGKEAALALISTGVDVIYHLLDN
AAPAVLQTAQEQGIYAVGNTTDQLDIAPKAVLTSAVQNVGEAIAYIANLAKNNQLKGEKYILGIENPEITKLGRFNNIVP
DKIKQIVEKSQQKILTGKLQFEDCSENGEEQVCFK
>Mature_355_residues
MNKKLNRRSFLGYMSTALAISFLLKACTNSASKTTENSDNNFIYSGSSSETFKIAIALPGVITDGGWNQSGYEGVKKAAE
KLNAEMIYVENVVQADQTETISDFARKGYNLVIGHGGQFDAAIEQIASQFPGTFFLGVNGNIAGENYASVTTNYFQVGYL
AGVVAGLMTETNKVAYLTGLSFKGTNLQGRAFELGAKSVNSIVEVVISYTGDFNDIAKGKEAALALISTGVDVIYHLLDN
AAPAVLQTAQEQGIYAVGNTTDQLDIAPKAVLTSAVQNVGEAIAYIANLAKNNQLKGEKYILGIENPEITKLGRFNNIVP
DKIKQIVEKSQQKILTGKLQFEDCSENGEEQVCFK

Specific function: Positive activator of the comK gene [H]

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 38171; Mature: 38171

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLNRRSFLGYMSTALAISFLLKACTNSASKTTENSDNNFIYSGSSSETFKIAIALPG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECC
VITDGGWNQSGYEGVKKAAEKLNAEMIYVENVVQADQTETISDFARKGYNLVIGHGGQFD
EEECCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHCCCHHHHHHHHHCCCEEEEECCCCHH
AAIEQIASQFPGTFFLGVNGNIAGENYASVTTNYFQVGYLAGVVAGLMTETNKVAYLTGL
HHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
SFKGTNLQGRAFELGAKSVNSIVEVVISYTGDFNDIAKGKEAALALISTGVDVIYHLLDN
EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHC
AAPAVLQTAQEQGIYAVGNTTDQLDIAPKAVLTSAVQNVGEAIAYIANLAKNNQLKGEKY
CCHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
ILGIENPEITKLGRFNNIVPDKIKQIVEKSQQKILTGKLQFEDCSENGEEQVCFK
EEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MNKKLNRRSFLGYMSTALAISFLLKACTNSASKTTENSDNNFIYSGSSSETFKIAIALPG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECC
VITDGGWNQSGYEGVKKAAEKLNAEMIYVENVVQADQTETISDFARKGYNLVIGHGGQFD
EEECCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHCCCHHHHHHHHHCCCEEEEECCCCHH
AAIEQIASQFPGTFFLGVNGNIAGENYASVTTNYFQVGYLAGVVAGLMTETNKVAYLTGL
HHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
SFKGTNLQGRAFELGAKSVNSIVEVVISYTGDFNDIAKGKEAALALISTGVDVIYHLLDN
EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHC
AAPAVLQTAQEQGIYAVGNTTDQLDIAPKAVLTSAVQNVGEAIAYIANLAKNNQLKGEKY
CCHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
ILGIENPEITKLGRFNNIVPDKIKQIVEKSQQKILTGKLQFEDCSENGEEQVCFK
EEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377 [H]