| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477078
Identifier: 113477078
GI number: 113477078
Start: 5513152
End: 5515257
Strand: Reverse
Name: 113477078
Synonym: Tery_3585
Alternate gene names: NA
Gene position: 5515257-5513152 (Counterclockwise)
Preceding gene: 113477082
Following gene: 113477077
Centisome position: 71.16
GC content: 30.2
Gene sequence:
>2106_bases ATGACAGAAAAAATAAAAACTATAGAAATTGACGAAAAATCTCCCCATTTACAAGCTGTTATTAAATTGGGCGATGCTAA TACAAAAACCCTAGGTCATTTATCCTACGATACTTTTTTTGATTATGCAAAACGTGGCCAAATTATTATAGCTTTAGATC CAAAAGAAAATTTTATTGGTTATCTGATGTACCGAAAGGTTCGTCGAAGTAATCATCTTGTAATAGTTCATTTATGTGTT GCTGAATCATCCCGCGGTAGGGGTTTGACTAGGACACTAGTAAATTATTTAAGTCAAAGGCATCAAGATTTTTATGGTAT TAAGTTAAAATGCCGTCGCGATTATGGATTAGACGAAATGTGGTCTAAGTTAGGCTTTGTTCCCTTAAATGAAAAGCCTG GAAAAAGTAAGGAAGGAAAACCCTTAACAGTTTGGTGGCTAGATCATGGTCATCCCAATTTATTTTCTGTTAATGCTACC GAAAAGCTCAATTCTAAACTATGTGCAATTATTGATATAAATGTTTTCTTTGATTTGTCTGAAAATGATAGTTTTAAAAG TGAAGAATCAGAGTCTTTACTTGCTGATTGGCTACAAGATGACTTAGAGTTATGTGTCACTGATGAAATTTTTAATGCTA TTAATAATATTACTGATTCCCAAGATAGAAAATATCAACGTCTCAATGCAGAAAAGTTTACAAAATTACCATATAATCAG CAAAATTTTGAGGTTTTTTTAAACTCTTTTATAGAGTTTATGGAAGGAAGTAATCTCAAACTTGATCAATCACAAATACG TCAGCTAGCTATGACACTTGCTTCTGAATGCCTAATTTTTGTAACTCGTGATTCACATATTTTAAATTTAACCGATGAAA TCTATAAAATTTTTAAGCTAGAAATAACTAATCCTAGTAACCTCATTATTAACCTAGATGAAATTCGTAGAAGCACTACA TATCAACCTGTACGATTAGCGGGTTCAAATCAAATCAATCTTCAATCTGTACCGATCAATCAAATCAAGGGGCTGACTGA TTATTTTTGGAGTCAAAAAAATGGTGAGAAAAAAGAATATTTTCAGCAAAAAATTCGCAGTTTTATTAGTAATTGTTCTA AGTTTATATGTCATCAGCTTGTAATGGAAGAAAATCAACCAGTCGGTTTAATTGTTTATAATAAATCAAAATCTTCTGAA TTAGAAATTCCATTACTAAGAGTTAAAGATAATTCTTTAGGTGGAACACTTGCACGTTATTTAATTTTTCATGCCATAAT AATTTCAGCTCAGGAGAACAGATATTTTACAAGAATCACTGACCCCTATTTAGAAGAAATAGTTGTTAAAGCTATTCAAG AAGATGCTTTTATTAAGAATAAGGGAGAATATATAAAGGTAAATATTCCCGTAGCAGAAACAGCATCTAATCTATCTAAG CGTCTCAATGATTTAGCTAAATTTGAATTAGAATATCAATCAAATTTTTGTATAAAATTTGCAAAAACTATTAGTCAATC TGAATCAACGAAAAATTCACAAACTACAATAGAAATAGAACGTTTTCTGTGGCCTGCAAAAATAATTGATGCTAATGTGC CTACATGGATTATTCCTATTAAACCATTTTGGGCAAAAGATTTATTTGATGAAGAGTTAGCTAATTATTGGTTATTTGGC TCTAAAACTGAATTAGCACTTAAACGTGAACTTGTATTTTATCGTTCTAAGGGCGGTTTAAAACCTGGTGTAATTGGTAG GATTATATGGTATGTCAGCAATGATAAATCTTTTCCATACGGGACAACAAAAGTAATTAAAGCTTGTTCTCGATTAGATG AAGTCATAGTAGACAAACCAGAAAAATTATATAGACAATTTCGTAATCTAGGTATATATAAATTAGAAGATTTAATAAAA ATCACCAACAATGATCCTAATGAAGATATAATGGCTGTTCGATTTAGTGATACTCAAGTGTTCACTAATACTATAACTTT AAAAGAACTTCAAGATATACTAAAAAAACAGATAACTGTTCAAGGACCTTTTAAAATAACACCAGATCAATTTGCTAAAA TATATGATCAAATCAACAAAAATTAA
Upstream 100 bases:
>100_bases AAATGGTTGTTGATAAATGAAGTCATAAATGACAATCGAACCATGAATTTTTAAGATTAAACACCTAAGTCTCCTTAAGT GATTTCAAAAAGCATCAAAA
Downstream 100 bases:
>100_bases TTAGGATTATTCAAATATGCCAAATACAGTTCTTTTATCTATAAAGCCAGAATATGCTGATAAAATTTTCTACCAGAAAA CAAAAAAAGTTGAATTACGT
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase GNAT Family; Acetyltransferase
Number of amino acids: Translated: 701; Mature: 700
Protein sequence:
>701_residues MTEKIKTIEIDEKSPHLQAVIKLGDANTKTLGHLSYDTFFDYAKRGQIIIALDPKENFIGYLMYRKVRRSNHLVIVHLCV AESSRGRGLTRTLVNYLSQRHQDFYGIKLKCRRDYGLDEMWSKLGFVPLNEKPGKSKEGKPLTVWWLDHGHPNLFSVNAT EKLNSKLCAIIDINVFFDLSENDSFKSEESESLLADWLQDDLELCVTDEIFNAINNITDSQDRKYQRLNAEKFTKLPYNQ QNFEVFLNSFIEFMEGSNLKLDQSQIRQLAMTLASECLIFVTRDSHILNLTDEIYKIFKLEITNPSNLIINLDEIRRSTT YQPVRLAGSNQINLQSVPINQIKGLTDYFWSQKNGEKKEYFQQKIRSFISNCSKFICHQLVMEENQPVGLIVYNKSKSSE LEIPLLRVKDNSLGGTLARYLIFHAIIISAQENRYFTRITDPYLEEIVVKAIQEDAFIKNKGEYIKVNIPVAETASNLSK RLNDLAKFELEYQSNFCIKFAKTISQSESTKNSQTTIEIERFLWPAKIIDANVPTWIIPIKPFWAKDLFDEELANYWLFG SKTELALKRELVFYRSKGGLKPGVIGRIIWYVSNDKSFPYGTTKVIKACSRLDEVIVDKPEKLYRQFRNLGIYKLEDLIK ITNNDPNEDIMAVRFSDTQVFTNTITLKELQDILKKQITVQGPFKITPDQFAKIYDQINKN
Sequences:
>Translated_701_residues MTEKIKTIEIDEKSPHLQAVIKLGDANTKTLGHLSYDTFFDYAKRGQIIIALDPKENFIGYLMYRKVRRSNHLVIVHLCV AESSRGRGLTRTLVNYLSQRHQDFYGIKLKCRRDYGLDEMWSKLGFVPLNEKPGKSKEGKPLTVWWLDHGHPNLFSVNAT EKLNSKLCAIIDINVFFDLSENDSFKSEESESLLADWLQDDLELCVTDEIFNAINNITDSQDRKYQRLNAEKFTKLPYNQ QNFEVFLNSFIEFMEGSNLKLDQSQIRQLAMTLASECLIFVTRDSHILNLTDEIYKIFKLEITNPSNLIINLDEIRRSTT YQPVRLAGSNQINLQSVPINQIKGLTDYFWSQKNGEKKEYFQQKIRSFISNCSKFICHQLVMEENQPVGLIVYNKSKSSE LEIPLLRVKDNSLGGTLARYLIFHAIIISAQENRYFTRITDPYLEEIVVKAIQEDAFIKNKGEYIKVNIPVAETASNLSK RLNDLAKFELEYQSNFCIKFAKTISQSESTKNSQTTIEIERFLWPAKIIDANVPTWIIPIKPFWAKDLFDEELANYWLFG SKTELALKRELVFYRSKGGLKPGVIGRIIWYVSNDKSFPYGTTKVIKACSRLDEVIVDKPEKLYRQFRNLGIYKLEDLIK ITNNDPNEDIMAVRFSDTQVFTNTITLKELQDILKKQITVQGPFKITPDQFAKIYDQINKN >Mature_700_residues TEKIKTIEIDEKSPHLQAVIKLGDANTKTLGHLSYDTFFDYAKRGQIIIALDPKENFIGYLMYRKVRRSNHLVIVHLCVA ESSRGRGLTRTLVNYLSQRHQDFYGIKLKCRRDYGLDEMWSKLGFVPLNEKPGKSKEGKPLTVWWLDHGHPNLFSVNATE KLNSKLCAIIDINVFFDLSENDSFKSEESESLLADWLQDDLELCVTDEIFNAINNITDSQDRKYQRLNAEKFTKLPYNQQ NFEVFLNSFIEFMEGSNLKLDQSQIRQLAMTLASECLIFVTRDSHILNLTDEIYKIFKLEITNPSNLIINLDEIRRSTTY QPVRLAGSNQINLQSVPINQIKGLTDYFWSQKNGEKKEYFQQKIRSFISNCSKFICHQLVMEENQPVGLIVYNKSKSSEL EIPLLRVKDNSLGGTLARYLIFHAIIISAQENRYFTRITDPYLEEIVVKAIQEDAFIKNKGEYIKVNIPVAETASNLSKR LNDLAKFELEYQSNFCIKFAKTISQSESTKNSQTTIEIERFLWPAKIIDANVPTWIIPIKPFWAKDLFDEELANYWLFGS KTELALKRELVFYRSKGGLKPGVIGRIIWYVSNDKSFPYGTTKVIKACSRLDEVIVDKPEKLYRQFRNLGIYKLEDLIKI TNNDPNEDIMAVRFSDTQVFTNTITLKELQDILKKQITVQGPFKITPDQFAKIYDQINKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81240; Mature: 81109
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKIKTIEIDEKSPHLQAVIKLGDANTKTLGHLSYDTFFDYAKRGQIIIALDPKENFIG CCCCEEEEEECCCCCCEEEEEEECCCCCCEEECCCHHHHHHHHHCCCEEEEECCCCCHHH YLMYRKVRRSNHLVIVHLCVAESSRGRGLTRTLVNYLSQRHQDFYGIKLKCRRDYGLDEM HHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHH WSKLGFVPLNEKPGKSKEGKPLTVWWLDHGHPNLFSVNATEKLNSKLCAIIDINVFFDLS HHHCCCEECCCCCCCCCCCCEEEEEEEECCCCCEEEECCHHHHCCCEEEEEEEEEEEEEC ENDSFKSEESESLLADWLQDDLELCVTDEIFNAINNITDSQDRKYQRLNAEKFTKLPYNQ CCCCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCHHHHHHCCHHHHHCCCCCC QNFEVFLNSFIEFMEGSNLKLDQSQIRQLAMTLASECLIFVTRDSHILNLTDEIYKIFKL CHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCEEEEEECCCEEEECHHHHEEEEEE EITNPSNLIINLDEIRRSTTYQPVRLAGSNQINLQSVPINQIKGLTDYFWSQKNGEKKEY EECCCCCEEEEHHHHHCCCCCCCEEECCCCEEEEEECCHHHHCCHHHHHHCCCCCCHHHH FQQKIRSFISNCSKFICHQLVMEENQPVGLIVYNKSKSSELEIPLLRVKDNSLGGTLARY HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHH LIFHAIIISAQENRYFTRITDPYLEEIVVKAIQEDAFIKNKGEYIKVNIPVAETASNLSK HHHHHHHEEECCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHH RLNDLAKFELEYQSNFCIKFAKTISQSESTKNSQTTIEIERFLWPAKIIDANVPTWIIPI HHHHHHHEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCHHHCCCCCCEEEEEC KPFWAKDLFDEELANYWLFGSKTELALKRELVFYRSKGGLKPGVIGRIIWYVSNDKSFPY CCHHHHHHHHHHHHHEEEECCCCHHHHHHHHEEEECCCCCCCCCEEEEEEEEECCCCCCC GTTKVIKACSRLDEVIVDKPEKLYRQFRNLGIYKLEDLIKITNNDPNEDIMAVRFSDTQV CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEHHHHEECCCCCCCCEEEEEECCCEE FTNTITLKELQDILKKQITVQGPFKITPDQFAKIYDQINKN EEEEEEHHHHHHHHHHHEEECCCCEECHHHHHHHHHHHCCC >Mature Secondary Structure TEKIKTIEIDEKSPHLQAVIKLGDANTKTLGHLSYDTFFDYAKRGQIIIALDPKENFIG CCCEEEEEECCCCCCEEEEEEECCCCCCEEECCCHHHHHHHHHCCCEEEEECCCCCHHH YLMYRKVRRSNHLVIVHLCVAESSRGRGLTRTLVNYLSQRHQDFYGIKLKCRRDYGLDEM HHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHH WSKLGFVPLNEKPGKSKEGKPLTVWWLDHGHPNLFSVNATEKLNSKLCAIIDINVFFDLS HHHCCCEECCCCCCCCCCCCEEEEEEEECCCCCEEEECCHHHHCCCEEEEEEEEEEEEEC ENDSFKSEESESLLADWLQDDLELCVTDEIFNAINNITDSQDRKYQRLNAEKFTKLPYNQ CCCCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCHHHHHHCCHHHHHCCCCCC QNFEVFLNSFIEFMEGSNLKLDQSQIRQLAMTLASECLIFVTRDSHILNLTDEIYKIFKL CHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCEEEEEECCCEEEECHHHHEEEEEE EITNPSNLIINLDEIRRSTTYQPVRLAGSNQINLQSVPINQIKGLTDYFWSQKNGEKKEY EECCCCCEEEEHHHHHCCCCCCCEEECCCCEEEEEECCHHHHCCHHHHHHCCCCCCHHHH FQQKIRSFISNCSKFICHQLVMEENQPVGLIVYNKSKSSELEIPLLRVKDNSLGGTLARY HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHH LIFHAIIISAQENRYFTRITDPYLEEIVVKAIQEDAFIKNKGEYIKVNIPVAETASNLSK HHHHHHHEEECCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHH RLNDLAKFELEYQSNFCIKFAKTISQSESTKNSQTTIEIERFLWPAKIIDANVPTWIIPI HHHHHHHEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCHHHCCCCCCEEEEEC KPFWAKDLFDEELANYWLFGSKTELALKRELVFYRSKGGLKPGVIGRIIWYVSNDKSFPY CCHHHHHHHHHHHHHEEEECCCCHHHHHHHHEEEECCCCCCCCCEEEEEEEEECCCCCCC GTTKVIKACSRLDEVIVDKPEKLYRQFRNLGIYKLEDLIKITNNDPNEDIMAVRFSDTQV CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEHHHHEECCCCCCCCEEEEEECCCEE FTNTITLKELQDILKKQITVQGPFKITPDQFAKIYDQINKN EEEEEEHHHHHHHHHHHEEECCCCEECHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA