Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113477050
Identifier: 113477050
GI number: 113477050
Start: 5472811
End: 5473143
Strand: Reverse
Name: 113477050
Synonym: Tery_3553
Alternate gene names: NA
Gene position: 5473143-5472811 (Counterclockwise)
Preceding gene: 113477051
Following gene: 113477049
Centisome position: 70.62
GC content: 32.13
Gene sequence:
>333_bases ATGAATCAAGTTCTTTTTCATTTAGCCTTTCCGGTGAATAATATTACCAAAACGAAAGAATTCTATAGCAATGGTTTAGG TTGTAAAGTTGGGCGAGAATCTCGAAATTCAGTGATTTTAAATCTTTATGGTAATCAAATTGTTGCTCATATTGCTAAAG AAACTTTAGAACCACAAAAAGGAATTTACCCCAGACATTTTGGTTTAGTTTTTAGCCTAGAAAGTGACTGGGAAGCTTTA TTAGAACGTGCTCAAAAAAATAAATTAAAATTCTATCAGCAACCTAAGCGGAGGTTTACAAATTCTCCTTTAACCAGGGA TTTACAGAATTAA
Upstream 100 bases:
>100_bases TATTAGATAACATTATATCTACTCGCTAAAAACATCTATTGTCATTTTAACTTAATATTTACCAGAGAAAATAATACTTA CACATTACAAGGAAATAACT
Downstream 100 bases:
>100_bases TATTAGATAACATTATATCTACTCGCTAAAAACATCTATTGTCATTTTAACTTAATATTTACCAGAGAAAATAATACTTA CACATTACAAGGAAATAACT
Product: glyoxalase family protein
Products: NA
Alternate protein names: Glyoxalase Family Protein; Glyoxalase/Bleomycin Resistance Family Protein; Glyoxalase/Bleomycin Resistance Protein; Glyoxalase; Extradiol Family Dioxygenase; Dioxygenase; Lactoylglutathione Lyase Protein
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MNQVLFHLAFPVNNITKTKEFYSNGLGCKVGRESRNSVILNLYGNQIVAHIAKETLEPQKGIYPRHFGLVFSLESDWEAL LERAQKNKLKFYQQPKRRFTNSPLTRDLQN
Sequences:
>Translated_110_residues MNQVLFHLAFPVNNITKTKEFYSNGLGCKVGRESRNSVILNLYGNQIVAHIAKETLEPQKGIYPRHFGLVFSLESDWEAL LERAQKNKLKFYQQPKRRFTNSPLTRDLQN >Mature_110_residues MNQVLFHLAFPVNNITKTKEFYSNGLGCKVGRESRNSVILNLYGNQIVAHIAKETLEPQKGIYPRHFGLVFSLESDWEAL LERAQKNKLKFYQQPKRRFTNSPLTRDLQN
Specific function: Unknown
COG id: COG3565
COG function: function code R; Predicted dioxygenase of extradiol dioxygenase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12795; Mature: 12795
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQVLFHLAFPVNNITKTKEFYSNGLGCKVGRESRNSVILNLYGNQIVAHIAKETLEPQK CCCEEEEEECCCCCHHHHHHHHHCCCCCEECCCCCCCEEEEECCHHHHHHHHHHHCCCCC GIYPRHFGLVFSLESDWEALLERAQKNKLKFYQQPKRRFTNSPLTRDLQN CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCC >Mature Secondary Structure MNQVLFHLAFPVNNITKTKEFYSNGLGCKVGRESRNSVILNLYGNQIVAHIAKETLEPQK CCCEEEEEECCCCCHHHHHHHHHCCCCCEECCCCCCCEEEEECCHHHHHHHHHHHCCCCC GIYPRHFGLVFSLESDWEALLERAQKNKLKFYQQPKRRFTNSPLTRDLQN CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA