Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is surE
Identifier: 113476983
GI number: 113476983
Start: 5359218
End: 5360024
Strand: Reverse
Name: surE
Synonym: Tery_3481
Alternate gene names: 113476983
Gene position: 5360024-5359218 (Counterclockwise)
Preceding gene: 113476988
Following gene: 113476982
Centisome position: 69.16
GC content: 36.8
Gene sequence:
>807_bases ATGAAAATATTGGTTAGTAACGACGACGGCATTTTTGCTGAAGGTATCCGGAGCTTAGCTAATGGTTTAGCAGCAGTAGG CCATGAAGTTTTTGTGGTTTGTCCTGATAAAGAACGTTCAGCTACAGGTCATGGCTTAACATTACATCAACCTATTCGGG CTGAAATTGTCAAATCAATTTTTGATGATCGGATAACAGCTTGGGCTTGTTCTGGCACTCCTGCTGACTGTGTAAAATTA GCCCTATTTAGCTTATTAGAAACTCAACCAGACTTAGTATTAGCAGGAATTAATCATGGCCCAAATTTAGGCACTGATAT ATTCTATTCTGGTACTGTTTCTGCAGCCATGGAAGGGATAGTTGAAAATATTCCTAGCATTGCCTTTAGTCTTGGCAGTT ACACTTCTAGGGAGTTTGAAGTTGCTGTCAATTTTGCTCAAAGTCTAGTGCAGAAAATAGAAAGCCAACCTTTAGATAAT TTAATGTTACTGAATGTAAACATTCCAGCAGTTAAGGAAACAGAAATAGCAGGAGTAAAAATTACCCGTCAAGGAGTTTG TCGATACATAGATATATTTAAAAAACGGGTTGACCCGCGAGGTAAAACTTACTATTGGCTAGCTGGAGAATTATTGGAAG AAACTGAAGAAACTAAGGATCAAGCAATACCCGACAAATATAATACGGATGTTGAAGCAATGCGTGAAAAATATATCACA ATTACTCCCTTGCAATACAATCTAACTTATGGTAGGCAATTAACCTATCTACAAAAGTGGAAAATTGATAATTTTAGTTA CAATTAA
Upstream 100 bases:
>100_bases TTAGTGAGAAATAGGATAATTTGGGCTCCTGCATATGTAGAAAATTAAAACTGAGGAAAGATTTTTCTCGACCTATTCCA TTCCCTATTACCTTAAAAAA
Downstream 100 bases:
>100_bases TATAGCTTTTTATTATTAGTGCGGTGATAAGTGCGACAATAAGTAGCAGTTATTTTACTATAATTGAATTTCGAGTATTT TTCTAGTCTAATTATGGATA
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MKILVSNDDGIFAEGIRSLANGLAAVGHEVFVVCPDKERSATGHGLTLHQPIRAEIVKSIFDDRITAWACSGTPADCVKL ALFSLLETQPDLVLAGINHGPNLGTDIFYSGTVSAAMEGIVENIPSIAFSLGSYTSREFEVAVNFAQSLVQKIESQPLDN LMLLNVNIPAVKETEIAGVKITRQGVCRYIDIFKKRVDPRGKTYYWLAGELLEETEETKDQAIPDKYNTDVEAMREKYIT ITPLQYNLTYGRQLTYLQKWKIDNFSYN
Sequences:
>Translated_268_residues MKILVSNDDGIFAEGIRSLANGLAAVGHEVFVVCPDKERSATGHGLTLHQPIRAEIVKSIFDDRITAWACSGTPADCVKL ALFSLLETQPDLVLAGINHGPNLGTDIFYSGTVSAAMEGIVENIPSIAFSLGSYTSREFEVAVNFAQSLVQKIESQPLDN LMLLNVNIPAVKETEIAGVKITRQGVCRYIDIFKKRVDPRGKTYYWLAGELLEETEETKDQAIPDKYNTDVEAMREKYIT ITPLQYNLTYGRQLTYLQKWKIDNFSYN >Mature_268_residues MKILVSNDDGIFAEGIRSLANGLAAVGHEVFVVCPDKERSATGHGLTLHQPIRAEIVKSIFDDRITAWACSGTPADCVKL ALFSLLETQPDLVLAGINHGPNLGTDIFYSGTVSAAMEGIVENIPSIAFSLGSYTSREFEVAVNFAQSLVQKIESQPLDN LMLLNVNIPAVKETEIAGVKITRQGVCRYIDIFKKRVDPRGKTYYWLAGELLEETEETKDQAIPDKYNTDVEAMREKYIT ITPLQYNLTYGRQLTYLQKWKIDNFSYN
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=260, Percent_Identity=37.3076923076923, Blast_Score=162, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_TRIEI (Q10YV3)
Other databases:
- EMBL: CP000393 - RefSeq: YP_723044.1 - ProteinModelPortal: Q10YV3 - SMR: Q10YV3 - STRING: Q10YV3 - GeneID: 4244481 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_3481 - NMPDR: fig|203124.1.peg.1683 - eggNOG: COG0496 - HOGENOM: HBG600532 - OMA: TIYLATY - PhylomeDB: Q10YV3 - ProtClustDB: PRK00346 - BioCyc: TERY203124:TERY_3481-MONOMER - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 29830; Mature: 29830
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILVSNDDGIFAEGIRSLANGLAAVGHEVFVVCPDKERSATGHGLTLHQPIRAEIVKSI CEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCHHHHHHHHH FDDRITAWACSGTPADCVKLALFSLLETQPDLVLAGINHGPNLGTDIFYSGTVSAAMEGI HHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCHHHHHHHHH VENIPSIAFSLGSYTSREFEVAVNFAQSLVQKIESQPLDNLMLLNVNIPAVKETEIAGVK HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEE ITRQGVCRYIDIFKKRVDPRGKTYYWLAGELLEETEETKDQAIPDKYNTDVEAMREKYIT EEHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCEE ITPLQYNLTYGRQLTYLQKWKIDNFSYN EEEEEEEECCCCEEEEHHHCCCCCCCCC >Mature Secondary Structure MKILVSNDDGIFAEGIRSLANGLAAVGHEVFVVCPDKERSATGHGLTLHQPIRAEIVKSI CEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCHHHHHHHHH FDDRITAWACSGTPADCVKLALFSLLETQPDLVLAGINHGPNLGTDIFYSGTVSAAMEGI HHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCHHHHHHHHH VENIPSIAFSLGSYTSREFEVAVNFAQSLVQKIESQPLDNLMLLNVNIPAVKETEIAGVK HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEE ITRQGVCRYIDIFKKRVDPRGKTYYWLAGELLEETEETKDQAIPDKYNTDVEAMREKYIT EEHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCEE ITPLQYNLTYGRQLTYLQKWKIDNFSYN EEEEEEEECCCCEEEEHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA