The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476502

Identifier: 113476502

GI number: 113476502

Start: 4540901

End: 4541977

Strand: Reverse

Name: 113476502

Synonym: Tery_2924

Alternate gene names: NA

Gene position: 4541977-4540901 (Counterclockwise)

Preceding gene: 113476503

Following gene: 113476500

Centisome position: 58.61

GC content: 43.92

Gene sequence:

>1077_bases
TTGACTTTTAACTTGACACCACGTCCTTATACAGTAGTCTTAATTATACCCACTGGTATCGGTGCATCTATTGGGGGTTA
TGCTGGTGATGGTTTGCCAGTAGCACGAGCGATCGCACAAACCTGCGATCTTCTGATAACTCACCCTAATGTTCTCAATG
GGGCACAACTTTATTGGTCATTACCTAATGCTCTCTATGTAGAAGGGTATGCTATTGACAAATTTGCTCAAGGATGGTAT
GGCTTACAACCAGTACATCAAAACCGAGTGGGTTTAATCCTTGACCAGGCCATTGAGCCAGAATTACAACTGCGCCATTT
ACAAGCTGCCGATGCTACGAGAGCAACTTTAGGTCTAAATCTTACAGATTACATTGTGACTGACTTGCCATTAGGAGTAC
AACTACGAAAGTCTGAGTCTGGGGCGTCCTGGGGCACAATAGCTAATCCTGATAGCTTGCTACGAGCAGCATATACCCTA
ATTCACAAAGGAAAGGCAGAGGCGATCGCTGTTGTTGCTAGATTTCCGGATGACGAAGGTAGTACAGCATTGCAAGAATA
TCGTTATGGTCAAGGAGTTGACCCTCTGGCAGGAGCAGAGGCGGTTATTAGTCATTTAATTGTCAAAACTTTTCAAATAC
CCTGTGCTCATGCTCCTGCTTTATTACCCCTACCTCTAGACCCTAACTTATCACCCCGGTCTGCCGCGGAAGAAATGGGT
TATACGTTTTTGCCTTGTGTTTTAGTTGGTTTGAGTCGTGCGCCACAGTTAGTCACATTCAGAGATGGTTTGGCACTTCC
TAACAGCATCTGGGCAGAACAAGTTGATGCGGTGGTTGTACCTGCGACAGCTTGTGGAGGTAGTGCGGTGATAAGTTTCA
GTCAAACTAAAGCACAAATTATTGCCGTCAAAGAAAATAAAACCTATATGCAGGTATCACCTGAAAAGTTGGGGATCAAG
GCGCTGGAGGTAAATTCATATTTAGAAGCCTTGGGGGTGTTAGTTGCTCATAAGGCAGGTATTAGTCCAGAGGCTTTAAG
ACCAAAAATATTATCAATTCCTAGAATTGAGTATTAA

Upstream 100 bases:

>100_bases
GATGGTTAAACTCACTAATTGAAACTAGAACCCACCACTACTATTGCAATATTTTAGATGTGTTAGTCCACTACAATAAT
CAATTTTTAACTTCTGACTT

Downstream 100 bases:

>100_bases
TATTCCGTACCTTTTTCTTATGAAACTCTTTTCTATTAATATCAGGACTTATGCAAAGACAATATATAGCAATCCTAAGT
AGGTTGCGGCAAAATTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MTFNLTPRPYTVVLIIPTGIGASIGGYAGDGLPVARAIAQTCDLLITHPNVLNGAQLYWSLPNALYVEGYAIDKFAQGWY
GLQPVHQNRVGLILDQAIEPELQLRHLQAADATRATLGLNLTDYIVTDLPLGVQLRKSESGASWGTIANPDSLLRAAYTL
IHKGKAEAIAVVARFPDDEGSTALQEYRYGQGVDPLAGAEAVISHLIVKTFQIPCAHAPALLPLPLDPNLSPRSAAEEMG
YTFLPCVLVGLSRAPQLVTFRDGLALPNSIWAEQVDAVVVPATACGGSAVISFSQTKAQIIAVKENKTYMQVSPEKLGIK
ALEVNSYLEALGVLVAHKAGISPEALRPKILSIPRIEY

Sequences:

>Translated_358_residues
MTFNLTPRPYTVVLIIPTGIGASIGGYAGDGLPVARAIAQTCDLLITHPNVLNGAQLYWSLPNALYVEGYAIDKFAQGWY
GLQPVHQNRVGLILDQAIEPELQLRHLQAADATRATLGLNLTDYIVTDLPLGVQLRKSESGASWGTIANPDSLLRAAYTL
IHKGKAEAIAVVARFPDDEGSTALQEYRYGQGVDPLAGAEAVISHLIVKTFQIPCAHAPALLPLPLDPNLSPRSAAEEMG
YTFLPCVLVGLSRAPQLVTFRDGLALPNSIWAEQVDAVVVPATACGGSAVISFSQTKAQIIAVKENKTYMQVSPEKLGIK
ALEVNSYLEALGVLVAHKAGISPEALRPKILSIPRIEY
>Mature_357_residues
TFNLTPRPYTVVLIIPTGIGASIGGYAGDGLPVARAIAQTCDLLITHPNVLNGAQLYWSLPNALYVEGYAIDKFAQGWYG
LQPVHQNRVGLILDQAIEPELQLRHLQAADATRATLGLNLTDYIVTDLPLGVQLRKSESGASWGTIANPDSLLRAAYTLI
HKGKAEAIAVVARFPDDEGSTALQEYRYGQGVDPLAGAEAVISHLIVKTFQIPCAHAPALLPLPLDPNLSPRSAAEEMGY
TFLPCVLVGLSRAPQLVTFRDGLALPNSIWAEQVDAVVVPATACGGSAVISFSQTKAQIIAVKENKTYMQVSPEKLGIKA
LEVNSYLEALGVLVAHKAGISPEALRPKILSIPRIEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021763 [H]

Pfam domain/function: PF11805 DUF3326 [H]

EC number: NA

Molecular weight: Translated: 38303; Mature: 38171

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFNLTPRPYTVVLIIPTGIGASIGGYAGDGLPVARAIAQTCDLLITHPNVLNGAQLYWS
CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCEEEEE
LPNALYVEGYAIDKFAQGWYGLQPVHQNRVGLILDQAIEPELQLRHLQAADATRATLGLN
CCCEEEEECEEHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCHHEECCC
LTDYIVTDLPLGVQLRKSESGASWGTIANPDSLLRAAYTLIHKGKAEAIAVVARFPDDEG
HHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
STALQEYRYGQGVDPLAGAEAVISHLIVKTFQIPCAHAPALLPLPLDPNLSPRSAAEEMG
CHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHCC
YTFLPCVLVGLSRAPQLVTFRDGLALPNSIWAEQVDAVVVPATACGGSAVISFSQTKAQI
CHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCEEEEEECCCCCCEEEEEECCCEEE
IAVKENKTYMQVSPEKLGIKALEVNSYLEALGVLVAHKAGISPEALRPKILSIPRIEY
EEEECCCEEEEECHHHHCEEEEEHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCCCC
>Mature Secondary Structure 
TFNLTPRPYTVVLIIPTGIGASIGGYAGDGLPVARAIAQTCDLLITHPNVLNGAQLYWS
CCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCEEEEE
LPNALYVEGYAIDKFAQGWYGLQPVHQNRVGLILDQAIEPELQLRHLQAADATRATLGLN
CCCEEEEECEEHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCHHEECCC
LTDYIVTDLPLGVQLRKSESGASWGTIANPDSLLRAAYTLIHKGKAEAIAVVARFPDDEG
HHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
STALQEYRYGQGVDPLAGAEAVISHLIVKTFQIPCAHAPALLPLPLDPNLSPRSAAEEMG
CHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHCC
YTFLPCVLVGLSRAPQLVTFRDGLALPNSIWAEQVDAVVVPATACGGSAVISFSQTKAQI
CHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCEEEEEECCCCCCEEEEEECCCEEE
IAVKENKTYMQVSPEKLGIKALEVNSYLEALGVLVAHKAGISPEALRPKILSIPRIEY
EEEECCCEEEEECHHHHCEEEEEHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3041005 [H]