The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is crp [C]

Identifier: 113476485

GI number: 113476485

Start: 4516986

End: 4517459

Strand: Reverse

Name: crp [C]

Synonym: Tery_2905

Alternate gene names: 113476485

Gene position: 4517459-4516986 (Counterclockwise)

Preceding gene: 113476494

Following gene: 113476484

Centisome position: 58.29

GC content: 34.18

Gene sequence:

>474_bases
ATGCTTACAAGTGTCGAGCGTCTTTTGTTTATTAGAGCTGTACCAATTTTTAGAGAATTAAGAGATGATTTTCTAGTACG
TTTAGCTTCTGTGATGAACGAGCTATCTTTCCCTACTAACCATACTATTTTTACTGAAGGGAAAGAAGGAAGATCTCTTT
ATATCGTAGTATCTGGTAAAGTTAAAGTTCATTTGGAAGACCGTGAGTTAGCACACTTAGAACAAGGAGCTTGTTTTGGT
GAAATGTCTTTGTTTGATGCTGAACCTCGCTCTGCTTCTGTTACTACTTTAGAAAATTGTGAATGTTTAGTTTTAACTCA
AATACAACTTTATGACGCAATTGATGAAACACCAGAAATTGCAATTAATATTATTCGTCTATTGTCTCGTCGTATTCGTG
AATTTAACCAAAGGCTTAATGCTAAGGAAAGTAGTACTTCTTCTAATAGTAATAGAATACCTGAAATGCGTTAG

Upstream 100 bases:

>100_bases
CTATCAAATTTCATCTAAAATATTATTAACCATAAAAACTGGCTTCTACAACAATAATTATTAAATTTGTTTCTTTGTCA
AGAATGAGGATGTAAATATT

Downstream 100 bases:

>100_bases
AAATATGGAATAATATTGAGAAAATTAGTTGAGCTACAGATAAAGCTAACATGAATGAATTTATGAATAAATTGTAATAA
GTAACAGAATATTAAATTGC

Product: cyclic nucleotide-binding protein

Products: NA

Alternate protein names: Cyclic AMP Receptor Protein; Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MLTSVERLLFIRAVPIFRELRDDFLVRLASVMNELSFPTNHTIFTEGKEGRSLYIVVSGKVKVHLEDRELAHLEQGACFG
EMSLFDAEPRSASVTTLENCECLVLTQIQLYDAIDETPEIAINIIRLLSRRIREFNQRLNAKESSTSSNSNRIPEMR

Sequences:

>Translated_157_residues
MLTSVERLLFIRAVPIFRELRDDFLVRLASVMNELSFPTNHTIFTEGKEGRSLYIVVSGKVKVHLEDRELAHLEQGACFG
EMSLFDAEPRSASVTTLENCECLVLTQIQLYDAIDETPEIAINIIRLLSRRIREFNQRLNAKESSTSSNSNRIPEMR
>Mature_157_residues
MLTSVERLLFIRAVPIFRELRDDFLVRLASVMNELSFPTNHTIFTEGKEGRSLYIVVSGKVKVHLEDRELAHLEQGACFG
EMSLFDAEPRSASVTTLENCECLVLTQIQLYDAIDETPEIAINIIRLLSRRIREFNQRLNAKESSTSSNSNRIPEMR

Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17973; Mature: 17973

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS00889 CNMP_BINDING_2 ; PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSVERLLFIRAVPIFRELRDDFLVRLASVMNELSFPTNHTIFTEGKEGRSLYIVVSGK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECE
VKVHLEDRELAHLEQGACFGEMSLFDAEPRSASVTTLENCECLVLTQIQLYDAIDETPEI
EEEEECCCHHHHHHCCCCCCCCCEECCCCCCCCCEEECCCCEEEEEHHHHHHHHCCCHHH
AINIIRLLSRRIREFNQRLNAKESSTSSNSNRIPEMR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLTSVERLLFIRAVPIFRELRDDFLVRLASVMNELSFPTNHTIFTEGKEGRSLYIVVSGK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECE
VKVHLEDRELAHLEQGACFGEMSLFDAEPRSASVTTLENCECLVLTQIQLYDAIDETPEI
EEEEECCCHHHHHHCCCCCCCCCEECCCCCCCCCEEECCCCEEEEEHHHHHHHHCCCHHH
AINIIRLLSRRIREFNQRLNAKESSTSSNSNRIPEMR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA