| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476480
Identifier: 113476480
GI number: 113476480
Start: 4508879
End: 4509457
Strand: Reverse
Name: 113476480
Synonym: Tery_2900
Alternate gene names: NA
Gene position: 4509457-4508879 (Counterclockwise)
Preceding gene: 113476481
Following gene: 113476479
Centisome position: 58.19
GC content: 40.41
Gene sequence:
>579_bases GTGAACAACCAATTAAGAGTGTCTTTAGCAGGTATTTTAGCAACCGTTGGTCTCTTGGGTATAATGCCTCAATCGGAAGC AAAAGCAGAACAACTGGAAGCTACGGATAAAGTAGTTTTCTCTTGTGTCTCAATTAACGCTGAAGAAAATCAATATGCAA CTGTTCCTCAAATAGTTCGTGAAATAAGGGATACAAGCGAACCTGGGCTTTTAGGTGGATATCCTCTCGTGAAACAAGAA GTCATTCAAGTTTCCTCTAAACCAATGATTGTATGGACTGCAACTCTTTCTTCTGATCATCCTAAAGGTGCCTATACTCC TGACCGTCGTTGTCAATCCGTTAGCACTCGTCTAACTAACCTTGCTTATGCCCTAGGGATGACAACTTTCGCAGATATCA GTCAAATTGGTGTCGTCAATTATGAGCAAGTGGTCTATGTTTCCCCAGAAGAAGAGCCTAGCTTTGATAATGTAGTCTTC ACTTTAAAGCCAGAAAATCGTGAAAAATCAGAAGAAATTCTCACTCAATTTAAGGATTTCGGACAAGGTACTGCTAGTGA CGAGCCTATCTACGAATAA
Upstream 100 bases:
>100_bases CTTACTGACAACTATTAATAATTCTTCTACTGTAAAAGTATAGAGAAGAAATAAGTTAACTTCTCTGCCAAAGCAAATAT TAGGTTCAGAGGTCAAGATT
Downstream 100 bases:
>100_bases GTTATTTGAATATAAGTGTTGAGGGAATAACTAAGGGAATAAATCTTCCCTCTTCACTTCTTTTTATTAACTTATAGCAA ATTTCATCAAGGGTGAGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MNNQLRVSLAGILATVGLLGIMPQSEAKAEQLEATDKVVFSCVSINAEENQYATVPQIVREIRDTSEPGLLGGYPLVKQE VIQVSSKPMIVWTATLSSDHPKGAYTPDRRCQSVSTRLTNLAYALGMTTFADISQIGVVNYEQVVYVSPEEEPSFDNVVF TLKPENREKSEEILTQFKDFGQGTASDEPIYE
Sequences:
>Translated_192_residues MNNQLRVSLAGILATVGLLGIMPQSEAKAEQLEATDKVVFSCVSINAEENQYATVPQIVREIRDTSEPGLLGGYPLVKQE VIQVSSKPMIVWTATLSSDHPKGAYTPDRRCQSVSTRLTNLAYALGMTTFADISQIGVVNYEQVVYVSPEEEPSFDNVVF TLKPENREKSEEILTQFKDFGQGTASDEPIYE >Mature_192_residues MNNQLRVSLAGILATVGLLGIMPQSEAKAEQLEATDKVVFSCVSINAEENQYATVPQIVREIRDTSEPGLLGGYPLVKQE VIQVSSKPMIVWTATLSSDHPKGAYTPDRRCQSVSTRLTNLAYALGMTTFADISQIGVVNYEQVVYVSPEEEPSFDNVVF TLKPENREKSEEILTQFKDFGQGTASDEPIYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21166; Mature: 21166
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNQLRVSLAGILATVGLLGIMPQSEAKAEQLEATDKVVFSCVSINAEENQYATVPQIVR CCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH EIRDTSEPGLLGGYPLVKQEVIQVSSKPMIVWTATLSSDHPKGAYTPDRRCQSVSTRLTN HHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH LAYALGMTTFADISQIGVVNYEQVVYVSPEEEPSFDNVVFTLKPENREKSEEILTQFKDF HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH GQGTASDEPIYE CCCCCCCCCCCC >Mature Secondary Structure MNNQLRVSLAGILATVGLLGIMPQSEAKAEQLEATDKVVFSCVSINAEENQYATVPQIVR CCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH EIRDTSEPGLLGGYPLVKQEVIQVSSKPMIVWTATLSSDHPKGAYTPDRRCQSVSTRLTN HHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH LAYALGMTTFADISQIGVVNYEQVVYVSPEEEPSFDNVVFTLKPENREKSEEILTQFKDF HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH GQGTASDEPIYE CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA