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The map label for this gene is ndhM

Identifier: 113476467

GI number: 113476467

Start: 4490874

End: 4491221

Strand: Reverse

Name: ndhM

Synonym: Tery_2883

Alternate gene names: 113476467

Gene position: 4491221-4490874 (Counterclockwise)

Preceding gene: 113476473

Following gene: 113476464

Centisome position: 57.95

GC content: 35.34

Gene sequence:

>348_bases
ATGCTATTAAAGTCAACAACTAGACATATTCGTATTTTTGCAGGAACTGTGGAAAATAATGAACTTGTTCCTGATGATCA
GGCATTAACTTTAGATATTGATCCCGACAATGAACTTAACTGGAATGATACTGCTGTGGAGCAGGTTTACCGAAAGTTTG
ATGAATTGGTAGAATCTTATAGTGGTTCAGATTTAACTGAATATAATCTGCGTTGTATGGGTTCTGATTTAGAACATTTT
GTCCGATCACTATTACAATCAGGTGAAATTAGTTATAACCTTGGTAGTCGTGTCAATAACTATAGTCTGGGACTACCTAG
AGTAGATGTTGATGCTGAAGCTAAATAG

Upstream 100 bases:

>100_bases
GTTTAGTATCTGATTAATAAATTAGGGATATATTATCATGCTAGGTAATACAGTACTTAAGATAGAATTTAACGAAAACT
AACGCCAGAAAAAATTACTT

Downstream 100 bases:

>100_bases
CAATGTTATCTCAGTTATTAGTTATCAGTTATCAGTCTCTCTAGCTTCATTTAGAGGCTTGAAATACTAAAATTGAAATT
TCATCAATTCCGATAACATT

Product: NADH dehydrogenase I subunit M

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase I subunit M; NDH-1 subunit M; NDH-M

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MLLKSTTRHIRIFAGTVENNELVPDDQALTLDIDPDNELNWNDTAVEQVYRKFDELVESYSGSDLTEYNLRCMGSDLEHF
VRSLLQSGEISYNLGSRVNNYSLGLPRVDVDAEAK

Sequences:

>Translated_115_residues
MLLKSTTRHIRIFAGTVENNELVPDDQALTLDIDPDNELNWNDTAVEQVYRKFDELVESYSGSDLTEYNLRCMGSDLEHF
VRSLLQSGEISYNLGSRVNNYSLGLPRVDVDAEAK
>Mature_115_residues
MLLKSTTRHIRIFAGTVENNELVPDDQALTLDIDPDNELNWNDTAVEQVYRKFDELVESYSGSDLTEYNLRCMGSDLEHF
VRSLLQSGEISYNLGSRVNNYSLGLPRVDVDAEAK

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I ndhM subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NDHM_TRIEI (Q110L9)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_722528.1
- STRING:   Q110L9
- GeneID:   4244954
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_2883
- NMPDR:   fig|203124.1.peg.1839
- eggNOG:   NOG08035
- HOGENOM:   HBG286965
- OMA:   NYSMGLP
- ProtClustDB:   CLSK893267
- BioCyc:   TERY203124:TERY_2883-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01352
- InterPro:   IPR018922

Pfam domain/function: PF10664 DUF2485

EC number: 1.6.5.3

Molecular weight: Translated: 13057; Mature: 13057

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKSTTRHIRIFAGTVENNELVPDDQALTLDIDPDNELNWNDTAVEQVYRKFDELVESY
CCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
SGSDLTEYNLRCMGSDLEHFVRSLLQSGEISYNLGSRVNNYSLGLPRVDVDAEAK
CCCCCEECCEEEECCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLLKSTTRHIRIFAGTVENNELVPDDQALTLDIDPDNELNWNDTAVEQVYRKFDELVESY
CCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
SGSDLTEYNLRCMGSDLEHFVRSLLQSGEISYNLGSRVNNYSLGLPRVDVDAEAK
CCCCCEECCEEEECCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA