| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476444
Identifier: 113476444
GI number: 113476444
Start: 4455348
End: 4455596
Strand: Reverse
Name: 113476444
Synonym: Tery_2858
Alternate gene names: NA
Gene position: 4455596-4455348 (Counterclockwise)
Preceding gene: 113476445
Following gene: 113476443
Centisome position: 57.49
GC content: 32.13
Gene sequence:
>249_bases ATGCCAAGAGGTAAGATTTTAAAAGGGAAAGACCTAAAGATGCTGACAAAAGTTCAGAAAAAAGAGATTAAATGGACTCC TAAAAAATTAACTCTTGCTGGAATTGGAGTATTAGTTCCCTATACAGCAATATTAGTCTATGTAATTTCTTCTGAAGCTC CTTTAGGTTCAATAATTGTGATGATAGCAGTTCCTGTTCTATTTTTTGGAGGATATTCTCTCTTATATTCTTTAACAAGA AATCTCTGA
Upstream 100 bases:
>100_bases GATTGGAAATAATACTTAAGTTGCTTCAGTTTTGTGGAATAGTTAGAATAAAGTAAATAAAATCAAAGTATCTGATAATT ATTAGTCAAAGGAGTAACTC
Downstream 100 bases:
>100_bases AGCTACATCAGTTTTTAAGTTTAATAAGTCTAAAATATAATGATTTTTGGGGACATTAAATACCTGATATTAGGTAAAAT TTTCATGATTTTTATTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MPRGKILKGKDLKMLTKVQKKEIKWTPKKLTLAGIGVLVPYTAILVYVISSEAPLGSIIVMIAVPVLFFGGYSLLYSLTR NL
Sequences:
>Translated_82_residues MPRGKILKGKDLKMLTKVQKKEIKWTPKKLTLAGIGVLVPYTAILVYVISSEAPLGSIIVMIAVPVLFFGGYSLLYSLTR NL >Mature_81_residues PRGKILKGKDLKMLTKVQKKEIKWTPKKLTLAGIGVLVPYTAILVYVISSEAPLGSIIVMIAVPVLFFGGYSLLYSLTRN L
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9034; Mature: 8903
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRGKILKGKDLKMLTKVQKKEIKWTPKKLTLAGIGVLVPYTAILVYVISSEAPLGSIIV CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH MIAVPVLFFGGYSLLYSLTRNL HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PRGKILKGKDLKMLTKVQKKEIKWTPKKLTLAGIGVLVPYTAILVYVISSEAPLGSIIV CCCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH MIAVPVLFFGGYSLLYSLTRNL HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA