The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476361

Identifier: 113476361

GI number: 113476361

Start: 4287744

End: 4288979

Strand: Reverse

Name: 113476361

Synonym: Tery_2766

Alternate gene names: NA

Gene position: 4288979-4287744 (Counterclockwise)

Preceding gene: 113476362

Following gene: 113476360

Centisome position: 55.34

GC content: 42.39

Gene sequence:

>1236_bases
ATGAATGTCGTTGAAGAAGTACCTTTGTTGAAGGTCTTACTGTCTCTTTTTTACAGTTTGCGCCAATATGGCTTGCCTTT
GGGAGTTGAAGACTATATGTTAGTGCTGAGGGCATTGCAAGGTGGGTTTGGTATAGGCGATCGCGACTCTTTAGAACGAC
TATGTTGTACTTTGTGGACAAAATCTGAACAGGAGGCCCGCCTGTTACATCAACTTCTAGGTCGGGCAATAACCAATGCT
CCTTCTTCTGCTGAATTACCACAACCTGTCGAAGATACACCGAATCCCTCCCCAACTAGCGCTTCAACTAGACCTGTATC
AAAGGAGTCTGAGGAAGTTATGGACTCTTCGACTTTACCATCTACAGCGACGCCTGTTCGCAACATATCTGAGCAACTTG
AGGAAAAAGCTCCATTAAAAGAGCCAGAAATACCTGTGTCAAAACCGAGTCCATTGACTGATATTCCCCTAGAAATAGAT
GAACCAGAACTGGTCATTCAAGCTATCCGACATTATAATAGGTCTAATGAAATGATTTCTGAATACCAAGATCTAGCTGC
TCAATACCTGCCAGTGACCCCTCGGCAGATTAAGCAGAGTTGGCGTTTTTTAAGTCGTTCAGTCCCCCAAGGTATATCGG
ACAAGTTGAATGTACCAGCTACGGTAGCCAAGATTTGTCAGCAATGCATCTTAATTGAAGCGGTGCTGATGCCAAATTAT
GTAAATCGAGTTAAACTTGTGTTACTGGTTGATCAAGGTGGCTCAATGATTCCTTTTCATCATTTATCCCGTCAATTAAT
AGATAAAGCTCGACGGGGTGGAAATATTGAGCAGGCGAGTGTTTATTATTTTTATAATTATCCTGAAATATATTTTTATA
GTGACCCAACTCGCCTCAAAGCTCAACTAATTACAGATATTTTAGGAGCTATCGATGAAAGAGCAGGAGTACTTATGGTC
AGTGATGCTGGAGCTGCCAGGAGTAATTATAACCCAGAGCGAATTGAGTGCACCCAGAGGTTTATTGAACAACTTCGGCA
GTCAGTCCGTTATTATGCTTGGCTAAATCCTATGCCTAATGATAGTTGGCAAGGCACGACTGCTGGGGAAATTGCTCGGT
TTGTGCCAATGTTTGAGATGAGTCCTCAAGGATTTAATGCTGCTATCAATGCTTTGCGTGGTCGCTATGTGTATGGGAAA
GATTTTTATGAGTTGAGCCGGCAAAAATCATTATGA

Upstream 100 bases:

>100_bases
TATTAGGGAAGCTAAACGGTGAACTGCCTTTTGCTCAAGTTCTACTTAAGTATTGGCATGATTATAGAGAATATTTATAC
TCCTCCCAGGAGGAAAGAAA

Downstream 100 bases:

>100_bases
ATTCAACTAAAGCAATAGATTCGGAAATAGCTGTTGAGAGGGTGGTAGGATTTGCCCAACAATTCGACGGTACACATCTT
GATTTAGCTTGTCATGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: VWA Domain Containing CoxE-Like Protein; Cytoplasmic Protein

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MNVVEEVPLLKVLLSLFYSLRQYGLPLGVEDYMLVLRALQGGFGIGDRDSLERLCCTLWTKSEQEARLLHQLLGRAITNA
PSSAELPQPVEDTPNPSPTSASTRPVSKESEEVMDSSTLPSTATPVRNISEQLEEKAPLKEPEIPVSKPSPLTDIPLEID
EPELVIQAIRHYNRSNEMISEYQDLAAQYLPVTPRQIKQSWRFLSRSVPQGISDKLNVPATVAKICQQCILIEAVLMPNY
VNRVKLVLLVDQGGSMIPFHHLSRQLIDKARRGGNIEQASVYYFYNYPEIYFYSDPTRLKAQLITDILGAIDERAGVLMV
SDAGAARSNYNPERIECTQRFIEQLRQSVRYYAWLNPMPNDSWQGTTAGEIARFVPMFEMSPQGFNAAINALRGRYVYGK
DFYELSRQKSL

Sequences:

>Translated_411_residues
MNVVEEVPLLKVLLSLFYSLRQYGLPLGVEDYMLVLRALQGGFGIGDRDSLERLCCTLWTKSEQEARLLHQLLGRAITNA
PSSAELPQPVEDTPNPSPTSASTRPVSKESEEVMDSSTLPSTATPVRNISEQLEEKAPLKEPEIPVSKPSPLTDIPLEID
EPELVIQAIRHYNRSNEMISEYQDLAAQYLPVTPRQIKQSWRFLSRSVPQGISDKLNVPATVAKICQQCILIEAVLMPNY
VNRVKLVLLVDQGGSMIPFHHLSRQLIDKARRGGNIEQASVYYFYNYPEIYFYSDPTRLKAQLITDILGAIDERAGVLMV
SDAGAARSNYNPERIECTQRFIEQLRQSVRYYAWLNPMPNDSWQGTTAGEIARFVPMFEMSPQGFNAAINALRGRYVYGK
DFYELSRQKSL
>Mature_411_residues
MNVVEEVPLLKVLLSLFYSLRQYGLPLGVEDYMLVLRALQGGFGIGDRDSLERLCCTLWTKSEQEARLLHQLLGRAITNA
PSSAELPQPVEDTPNPSPTSASTRPVSKESEEVMDSSTLPSTATPVRNISEQLEEKAPLKEPEIPVSKPSPLTDIPLEID
EPELVIQAIRHYNRSNEMISEYQDLAAQYLPVTPRQIKQSWRFLSRSVPQGISDKLNVPATVAKICQQCILIEAVLMPNY
VNRVKLVLLVDQGGSMIPFHHLSRQLIDKARRGGNIEQASVYYFYNYPEIYFYSDPTRLKAQLITDILGAIDERAGVLMV
SDAGAARSNYNPERIECTQRFIEQLRQSVRYYAWLNPMPNDSWQGTTAGEIARFVPMFEMSPQGFNAAINALRGRYVYGK
DFYELSRQKSL

Specific function: Unknown

COG id: COG3825

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46420; Mature: 46420

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVVEEVPLLKVLLSLFYSLRQYGLPLGVEDYMLVLRALQGGFGIGDRDSLERLCCTLWT
CCHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
KSEQEARLLHQLLGRAITNAPSSAELPQPVEDTPNPSPTSASTRPVSKESEEVMDSSTLP
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
STATPVRNISEQLEEKAPLKEPEIPVSKPSPLTDIPLEIDEPELVIQAIRHYNRSNEMIS
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHH
EYQDLAAQYLPVTPRQIKQSWRFLSRSVPQGISDKLNVPATVAKICQQCILIEAVLMPNY
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHH
VNRVKLVLLVDQGGSMIPFHHLSRQLIDKARRGGNIEQASVYYFYNYPEIYFYSDPTRLK
HCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEECCCHHHH
AQLITDILGAIDERAGVLMVSDAGAARSNYNPERIECTQRFIEQLRQSVRYYAWLNPMPN
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DSWQGTTAGEIARFVPMFEMSPQGFNAAINALRGRYVYGKDFYELSRQKSL
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEECCHHHHHHHHCCC
>Mature Secondary Structure
MNVVEEVPLLKVLLSLFYSLRQYGLPLGVEDYMLVLRALQGGFGIGDRDSLERLCCTLWT
CCHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
KSEQEARLLHQLLGRAITNAPSSAELPQPVEDTPNPSPTSASTRPVSKESEEVMDSSTLP
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
STATPVRNISEQLEEKAPLKEPEIPVSKPSPLTDIPLEIDEPELVIQAIRHYNRSNEMIS
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHH
EYQDLAAQYLPVTPRQIKQSWRFLSRSVPQGISDKLNVPATVAKICQQCILIEAVLMPNY
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHH
VNRVKLVLLVDQGGSMIPFHHLSRQLIDKARRGGNIEQASVYYFYNYPEIYFYSDPTRLK
HCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEECCCHHHH
AQLITDILGAIDERAGVLMVSDAGAARSNYNPERIECTQRFIEQLRQSVRYYAWLNPMPN
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DSWQGTTAGEIARFVPMFEMSPQGFNAAINALRGRYVYGKDFYELSRQKSL
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA