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The map label for this gene is yoaA [C]

Identifier: 113476300

GI number: 113476300

Start: 4174532

End: 4176070

Strand: Reverse

Name: yoaA [C]

Synonym: Tery_2699

Alternate gene names: 113476300

Gene position: 4176070-4174532 (Counterclockwise)

Preceding gene: 113476301

Following gene: 113476299

Centisome position: 53.88

GC content: 37.1

Gene sequence:

>1539_bases
GTGATCGAAGTAGAAGTCCATCAATCCTTGTTAAATTTTCTGCGATCGCAAAATCAACCTCACTGGCCTCATAATTTAAC
AATGGCACGGCTAGTGGCAAGAGCTTTGCGACTGGGGCGTAGTGCTCTAATTCAAACAGCTTCACCTCCAGGTAGCCGTA
ATCAACAATATCAATTAAGTTATCTGTTACCAGTATTAATGTGGCCAAGAAAAACAATATTAGTTGCTCCTCAGCCAGTC
CAAGAACATTTAATAACTGTCGAAATTCCCAAATTAATGGCAAGTAACTCTCAGATTAGTTCATCAATTAGTAAAAAAGG
AATTCAAATCTATCCGCTACAAGAGCCTGATTTTAATGGACTACTACTGATGAAGCCCAAAGCTTGGTTAGTGAGCCAAT
GCCAAGATGACCACTTTTCTAAAGGTATTCCGACAATTATTGATTGGGCAGACTATTTAGAAAACTGGGTACAAAGCTTT
TTAACCACAAGCTTTTTACCCACTAATTGGAATCAATTGATGCAATTTTATCCCGATCAAGCTGACTTGATTCGTGAAAC
AAGGGTAAACTTAACAAAATCACTTTTTCAACATCCAGCTAATCCCTACAGTTGCTACTTAATTGAACAACATGAGCAAC
AGATTTTACAAAATCTCATCGAAGGTTTGTCATTAACTCTAAGAAATCAAGAATTACAGAGTCATAATTTAAATCATAAT
TTTTGGTATCAGTGGCAAAGCAATGGACAACTCAGGTGGGCAGAAATTCATCGCCAGAGAGGATCGTTTTCTTTATACTC
TACTCCTTATGATTTATCTGAAGCTCTAAAGAATATTTGGACTAAACAACCTGTAGTAATTATTGGAGGAGCATTAGACC
TAGAAGCAAAAGCTGATACCTATAGACAGAACATGGGACTAGGGAATATAACTTGTGTTAAATTTTCTCCTGATCGTCAC
AATGAGATGATTCAACTATATTTGCCCAATAGCTTACCAATGCCGAATACACCTCAATTTCAACCAGCATTAATTTCAGA
AATTCGGACTCTATTGCATATTAGCTCCAGTGTTATTAATAGATTAATAGTGCTTCTCATTGGAGATGTACCACTTAAAA
GTCAAGTGGGAACTACTTTGGCCTCTGAATTTGGCTCCCGAGTCCAAGTGGAAACTGTTTTTAGTGAAGAAAATGGAATT
TTAATTACTGGTTGGGAGTTTTGGCAACAACATCAAAAAGAATTCAAACCACCTAAATTATTGATAATTGCTACTTTGCC
CCTTCCATCTTTGGAACATCCTTTAGTCTCTGGGCGAGTCAATTTTTACAAGCAACAAGGTTTAGATTGGTTTAGATTAT
ACCTTTTACCAAAAGCACTGCAAGATATGCAACGTGCTATTACACCCGTGCGAGAATCTCAGGGCATCGTTGCGCTGTTA
GATAGTCGTGTGATTCGTCGTAGTTATGGTCAACAAATTTTAACAGCTCTTAGTCCTTTTGCCAAAATTGATTATTTGGA
TACTACATGGTTAATTTGA

Upstream 100 bases:

>100_bases
AAATTTTGGGAAAAAAATCTGTAAAAATGAAACTCTCTTTACCTTCTGACAATAAAGTAGCTGATTTTATTAACGGCTTT
TATTACTTTACTTAAAGTCT

Downstream 100 bases:

>100_bases
ACTAGGGAATAGGGATTAGGAAGTAGGATTAATGATTATGTGGATTTAAATTAAAGCAAATTGCTGTATAACCCAAAAAC
TAGGATTTTTAATTCAATTT

Product: putative ATP-dependent DNA helicase DinG

Products: NA

Alternate protein names: Rad3-Related DNA Helicase; ATP-Dependent Helicase; ATP-Dependent DNA Helicase DinG; Carboxyl-Terminal Protease; DNA Polymerase III Subunit Epsilon; Rad3-Like DNA Helicase-Like Protein; ATP-Dependent DNA Helicase-Related Protein; Type III Restriction Protein Res Subunit; DNA Helicase; Rad3-Related DNA Helicases

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MIEVEVHQSLLNFLRSQNQPHWPHNLTMARLVARALRLGRSALIQTASPPGSRNQQYQLSYLLPVLMWPRKTILVAPQPV
QEHLITVEIPKLMASNSQISSSISKKGIQIYPLQEPDFNGLLLMKPKAWLVSQCQDDHFSKGIPTIIDWADYLENWVQSF
LTTSFLPTNWNQLMQFYPDQADLIRETRVNLTKSLFQHPANPYSCYLIEQHEQQILQNLIEGLSLTLRNQELQSHNLNHN
FWYQWQSNGQLRWAEIHRQRGSFSLYSTPYDLSEALKNIWTKQPVVIIGGALDLEAKADTYRQNMGLGNITCVKFSPDRH
NEMIQLYLPNSLPMPNTPQFQPALISEIRTLLHISSSVINRLIVLLIGDVPLKSQVGTTLASEFGSRVQVETVFSEENGI
LITGWEFWQQHQKEFKPPKLLIIATLPLPSLEHPLVSGRVNFYKQQGLDWFRLYLLPKALQDMQRAITPVRESQGIVALL
DSRVIRRSYGQQILTALSPFAKIDYLDTTWLI

Sequences:

>Translated_512_residues
MIEVEVHQSLLNFLRSQNQPHWPHNLTMARLVARALRLGRSALIQTASPPGSRNQQYQLSYLLPVLMWPRKTILVAPQPV
QEHLITVEIPKLMASNSQISSSISKKGIQIYPLQEPDFNGLLLMKPKAWLVSQCQDDHFSKGIPTIIDWADYLENWVQSF
LTTSFLPTNWNQLMQFYPDQADLIRETRVNLTKSLFQHPANPYSCYLIEQHEQQILQNLIEGLSLTLRNQELQSHNLNHN
FWYQWQSNGQLRWAEIHRQRGSFSLYSTPYDLSEALKNIWTKQPVVIIGGALDLEAKADTYRQNMGLGNITCVKFSPDRH
NEMIQLYLPNSLPMPNTPQFQPALISEIRTLLHISSSVINRLIVLLIGDVPLKSQVGTTLASEFGSRVQVETVFSEENGI
LITGWEFWQQHQKEFKPPKLLIIATLPLPSLEHPLVSGRVNFYKQQGLDWFRLYLLPKALQDMQRAITPVRESQGIVALL
DSRVIRRSYGQQILTALSPFAKIDYLDTTWLI
>Mature_512_residues
MIEVEVHQSLLNFLRSQNQPHWPHNLTMARLVARALRLGRSALIQTASPPGSRNQQYQLSYLLPVLMWPRKTILVAPQPV
QEHLITVEIPKLMASNSQISSSISKKGIQIYPLQEPDFNGLLLMKPKAWLVSQCQDDHFSKGIPTIIDWADYLENWVQSF
LTTSFLPTNWNQLMQFYPDQADLIRETRVNLTKSLFQHPANPYSCYLIEQHEQQILQNLIEGLSLTLRNQELQSHNLNHN
FWYQWQSNGQLRWAEIHRQRGSFSLYSTPYDLSEALKNIWTKQPVVIIGGALDLEAKADTYRQNMGLGNITCVKFSPDRH
NEMIQLYLPNSLPMPNTPQFQPALISEIRTLLHISSSVINRLIVLLIGDVPLKSQVGTTLASEFGSRVQVETVFSEENGI
LITGWEFWQQHQKEFKPPKLLIIATLPLPSLEHPLVSGRVNFYKQQGLDWFRLYLLPKALQDMQRAITPVRESQGIVALL
DSRVIRRSYGQQILTALSPFAKIDYLDTTWLI

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58901; Mature: 58901

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVEVHQSLLNFLRSQNQPHWPHNLTMARLVARALRLGRSALIQTASPPGSRNQQYQLS
CEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHEECCCCCCCCCCCEEHH
YLLPVLMWPRKTILVAPQPVQEHLITVEIPKLMASNSQISSSISKKGIQIYPLQEPDFNG
HHHHHHHCCCCEEEECCCCHHHCEEEEEEHHHHHCCHHHHHHHHHCCCEEEECCCCCCCC
LLLMKPKAWLVSQCQDDHFSKGIPTIIDWADYLENWVQSFLTTSFLPTNWNQLMQFYPDQ
EEEECCCHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCH
ADLIRETRVNLTKSLFQHPANPYSCYLIEQHEQQILQNLIEGLSLTLRNQELQSHNLNHN
HHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHEEEHCCHHHHHCCCCCC
FWYQWQSNGQLRWAEIHRQRGSFSLYSTPYDLSEALKNIWTKQPVVIIGGALDLEAKADT
EEEEECCCCCEEHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCEECCCCHHH
YRQNMGLGNITCVKFSPDRHNEMIQLYLPNSLPMPNTPQFQPALISEIRTLLHISSSVIN
HHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RLIVLLIGDVPLKSQVGTTLASEFGSRVQVETVFSEENGILITGWEFWQQHQKEFKPPKL
HHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEECHHHHHHHHHHCCCCEE
LIIATLPLPSLEHPLVSGRVNFYKQQGLDWFRLYLLPKALQDMQRAITPVRESQGIVALL
EEEEECCCCCCCCCHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEHH
DSRVIRRSYGQQILTALSPFAKIDYLDTTWLI
HHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC
>Mature Secondary Structure
MIEVEVHQSLLNFLRSQNQPHWPHNLTMARLVARALRLGRSALIQTASPPGSRNQQYQLS
CEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHEECCCCCCCCCCCEEHH
YLLPVLMWPRKTILVAPQPVQEHLITVEIPKLMASNSQISSSISKKGIQIYPLQEPDFNG
HHHHHHHCCCCEEEECCCCHHHCEEEEEEHHHHHCCHHHHHHHHHCCCEEEECCCCCCCC
LLLMKPKAWLVSQCQDDHFSKGIPTIIDWADYLENWVQSFLTTSFLPTNWNQLMQFYPDQ
EEEECCCHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCH
ADLIRETRVNLTKSLFQHPANPYSCYLIEQHEQQILQNLIEGLSLTLRNQELQSHNLNHN
HHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHEEEHCCHHHHHCCCCCC
FWYQWQSNGQLRWAEIHRQRGSFSLYSTPYDLSEALKNIWTKQPVVIIGGALDLEAKADT
EEEEECCCCCEEHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCEECCCCHHH
YRQNMGLGNITCVKFSPDRHNEMIQLYLPNSLPMPNTPQFQPALISEIRTLLHISSSVIN
HHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RLIVLLIGDVPLKSQVGTTLASEFGSRVQVETVFSEENGILITGWEFWQQHQKEFKPPKL
HHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEECHHHHHHHHHHCCCCEE
LIIATLPLPSLEHPLVSGRVNFYKQQGLDWFRLYLLPKALQDMQRAITPVRESQGIVALL
EEEEECCCCCCCCCHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEHH
DSRVIRRSYGQQILTALSPFAKIDYLDTTWLI
HHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA