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The map label for this gene is radC [C]

Identifier: 113476272

GI number: 113476272

Start: 4133385

End: 4134116

Strand: Reverse

Name: radC [C]

Synonym: Tery_2667

Alternate gene names: 113476272

Gene position: 4134116-4133385 (Counterclockwise)

Preceding gene: 113476275

Following gene: 113476264

Centisome position: 53.34

GC content: 39.48

Gene sequence:

>732_bases
ATGACCTACAGCCTCAGAATAGCAGACTTACCTAGTAATGAACGACCACGGGAAAGATTAATTGCCTGTGGTTCTCAAAG
TCTTTCGACGGCAGAATTAATTGCTATTCTACTAGGTACGGGTCAAGGAAAAGGAAAACTCTCTGCTGTTGGCCTCGGAC
AATACATATTAAATCAATTAAGTCAATATGAGCGTGACCCCCTCTCAATTCTCCGTAATATTACAGTTCAAGAATTAACT
CAAATTCATGGTATTGGTACAGCGAAAGCAACAACTATTCTCGCTGCTATTGAATTAGGAAAAAGAGTATTTCAATCTCG
CCCTCCAGAATTAGCAGTTGTTGAAAGTCCCCAAGCTGCTGCTGATGCCTTGAGTCAAGATTTGATGTGGCAAACCCAAG
AAAAATTTGCTGTTTTATTATTAGATGTAAAGAACCGCTTACTCGGAACTCAGGTAATTACTATTGGTACAGCAACAGAA
ACATTAGCTCATCCCCGCGAAATTTTTGGAGAAGTGATTCGCCAAGGTGCAAGCAGAGTAATTATTTCTCATAACCATCC
TTCAGGAAATGTCGAACCAAGCCCTGAAGATATCAATTTAACTAAACAACTTTTAGCAGGAGCGCAAATTTTAGATATAC
CCTTACTAGATCATATTATTATCGGTAACGGAGAACATTCTAGTCTGCGCCAGATAACTAATTTATGGGAAGACTACCCT
CAAAGAGGTTAG

Upstream 100 bases:

>100_bases
TCTGTGACTAAACTATGCTATGTTGAAAAAAATTAACTCTAGTATTTCAAGTTTTATAATTCAGCTAGAAGTACTGATAA
CTAATAAGTAATAACTAGAA

Downstream 100 bases:

>100_bases
TGAATATTGAAAATATCTTTGTCTTGTTTATTTGAAGGTAAAACTTACTCAGAGTCGCCACCCAAAATCTATATACCAGA
CAGCGCATTGACCATATAAT

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MTYSLRIADLPSNERPRERLIACGSQSLSTAELIAILLGTGQGKGKLSAVGLGQYILNQLSQYERDPLSILRNITVQELT
QIHGIGTAKATTILAAIELGKRVFQSRPPELAVVESPQAAADALSQDLMWQTQEKFAVLLLDVKNRLLGTQVITIGTATE
TLAHPREIFGEVIRQGASRVIISHNHPSGNVEPSPEDINLTKQLLAGAQILDIPLLDHIIIGNGEHSSLRQITNLWEDYP
QRG

Sequences:

>Translated_243_residues
MTYSLRIADLPSNERPRERLIACGSQSLSTAELIAILLGTGQGKGKLSAVGLGQYILNQLSQYERDPLSILRNITVQELT
QIHGIGTAKATTILAAIELGKRVFQSRPPELAVVESPQAAADALSQDLMWQTQEKFAVLLLDVKNRLLGTQVITIGTATE
TLAHPREIFGEVIRQGASRVIISHNHPSGNVEPSPEDINLTKQLLAGAQILDIPLLDHIIIGNGEHSSLRQITNLWEDYP
QRG
>Mature_242_residues
TYSLRIADLPSNERPRERLIACGSQSLSTAELIAILLGTGQGKGKLSAVGLGQYILNQLSQYERDPLSILRNITVQELTQ
IHGIGTAKATTILAAIELGKRVFQSRPPELAVVESPQAAADALSQDLMWQTQEKFAVLLLDVKNRLLGTQVITIGTATET
LAHPREIFGEVIRQGASRVIISHNHPSGNVEPSPEDINLTKQLLAGAQILDIPLLDHIIIGNGEHSSLRQITNLWEDYPQ
RG

Specific function: Involved In DNA Repair. [C]

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family

Homologues:

Organism=Escherichia coli, GI87082300, Length=215, Percent_Identity=33.953488372093, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1788997, Length=122, Percent_Identity=35.2459016393443, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI2367100, Length=122, Percent_Identity=36.0655737704918, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788312, Length=110, Percent_Identity=34.5454545454545, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2667_TRIEI (Q111G4)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_722333.1
- ProteinModelPortal:   Q111G4
- SMR:   Q111G4
- STRING:   Q111G4
- GeneID:   4245162
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_2667
- NMPDR:   fig|203124.1.peg.1144
- eggNOG:   COG2003
- HOGENOM:   HBG751042
- OMA:   LDHLILG
- PhylomeDB:   Q111G4
- ProtClustDB:   PRK00024
- BioCyc:   TERY203124:TERY_2667-MONOMER
- InterPro:   IPR001405
- InterPro:   IPR020891
- TIGRFAMs:   TIGR00608

Pfam domain/function: PF04002 DUF2466

EC number: NA

Molecular weight: Translated: 26502; Mature: 26371

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS01302 UPF0758

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYSLRIADLPSNERPRERLIACGSQSLSTAELIAILLGTGQGKGKLSAVGLGQYILNQL
CCEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHH
SQYERDPLSILRNITVQELTQIHGIGTAKATTILAAIELGKRVFQSRPPELAVVESPQAA
HHHCCCHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH
ADALSQDLMWQTQEKFAVLLLDVKNRLLGTQVITIGTATETLAHPREIFGEVIRQGASRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCCHHHHHHHHHHCCCCEE
IISHNHPSGNVEPSPEDINLTKQLLAGAQILDIPLLDHIIIGNGEHSSLRQITNLWEDYP
EEECCCCCCCCCCCCCCHHHHHHHHCCCHHEECHHHHEEEECCCCHHHHHHHHHHHHHCC
QRG
CCC
>Mature Secondary Structure 
TYSLRIADLPSNERPRERLIACGSQSLSTAELIAILLGTGQGKGKLSAVGLGQYILNQL
CEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHH
SQYERDPLSILRNITVQELTQIHGIGTAKATTILAAIELGKRVFQSRPPELAVVESPQAA
HHHCCCHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH
ADALSQDLMWQTQEKFAVLLLDVKNRLLGTQVITIGTATETLAHPREIFGEVIRQGASRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCCHHHHHHHHHHCCCCEE
IISHNHPSGNVEPSPEDINLTKQLLAGAQILDIPLLDHIIIGNGEHSSLRQITNLWEDYP
EEECCCCCCCCCCCCCCHHHHHHHHCCCHHEECHHHHEEEECCCCHHHHHHHHHHHHHCC
QRG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA