| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is ahcY [H]
Identifier: 113476230
GI number: 113476230
Start: 4057414
End: 4058691
Strand: Reverse
Name: ahcY [H]
Synonym: Tery_2623
Alternate gene names: 113476230
Gene position: 4058691-4057414 (Counterclockwise)
Preceding gene: 113476231
Following gene: 113476229
Centisome position: 52.37
GC content: 39.91
Gene sequence:
>1278_bases ATGGTTGCAACACCAGTTAAAATTAAATACGAAGTTAAAGACGAGTCCTTGGCTGTTTTAGGTAAACAAAGAATTGAGTG GGCAGGTAGAGAAATGCCTGTTCTACGCCAAATTCAAGAACGCTTTGCTAAGGAAAAGCCATTAAGCGGGATTAAATTAG CAGCTTGCTGTCATGTTACTACTGAAACTGCTCACTTAGCGATCGCTCTGAAAAATGGTGGGGCTGATGCTGTATTAATT GCTAGTAACCCTCTATCTACTCAAGATGACGTAGCTGCTAGTTTGGTTGTAGATCATGGTATCTCTGTGTATGCTATCAA GGGAGAGGATGAAAAAACCTATCTGCGTCACGTAGAAATAGCTTTAGACCACAGGCCAAATATTATTATTGATGATGGTA GTGATGTTGTCGCTACTCTAGTAAAAAATAGACAAGATCAACTTCCTGAACTTATTGGTACTACGGAAGAAACTACTACC GGTATTGTTCGTTTGCGAGCAATGTTTAATGATGGGGTATTGACTTTTCCGGCGATGAATGTTAACGATGCTGATACTAA GCACTTCTTTGATAACCGCTACGGTACAGGTCAATCAACTCTTGATGGTATTATCCGTGCTACTAATGTTTTATTAGCTG GTAAAACTACTGTTGTTGTAGGTTATGGATGGTGCGGTAAAGGTACAGCACTTCGCGCTAGAGGTTTAGGTGCTAATGTT ATTGTAACTGAAGTTGACCCAGTTCGCGCTATTGAGGCGATCATGGATGGTTTCCGAGTTATGCCAATGGCAGAAGCGGC TCCATTAGGGGATCTATTTATTACTGTGACTGGTAATAAGCACGTTATTCGCGGCGAACATTTCAATGTCATGAAAGATG GAGCGATCGTTTGTAATTCCGGTCACTTTGATATTGAAATTGACCTGGAAACTTTGGGTAAGAATGCTGATAATGTCAAG ACAGTTAGACCTTTCACTCAACAGTACACACTTAAGAATGGTAAGTCTGTAATTGTATTAGGTGAAGGACGGTTAATTAA TTTAGCTGCAGCAGAAGGTCATCCTAGTGCGGTTATGGATATGAGTTTTGCTAACCAAGCATTGGCTTGCGAATATTTGG TTAAGAATAAAGGTAAATTACAGCCTGGTTTACATTCTATTCCTACCGAAGTTGATAAGGAAATTGCTCGTTTGAAATTA CAAGCTATGGGTATTGGTATTGATACTTTGACTGATGAACAGCTTGAATACATGAATTCCTGGACTGTTGGTACCTAA
Upstream 100 bases:
>100_bases AAAATAAATTTTGTCGTATTAACACTCCTGATAAAGATTTGCAAAATTATAAAAAATTAGTTAAGCTAAGTAAAATCATG ATCTATAAGGAAGTAGCTAA
Downstream 100 bases:
>100_bases TTGTTTCTTTTCAGAAGTAATAATTGGCTTGAACTAGTACTTAGTATTTGCTGACGAACTATTAGCTTCTGAAGGTTACT TAGGATATATAATGGGGGTT
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MVATPVKIKYEVKDESLAVLGKQRIEWAGREMPVLRQIQERFAKEKPLSGIKLAACCHVTTETAHLAIALKNGGADAVLI ASNPLSTQDDVAASLVVDHGISVYAIKGEDEKTYLRHVEIALDHRPNIIIDDGSDVVATLVKNRQDQLPELIGTTEETTT GIVRLRAMFNDGVLTFPAMNVNDADTKHFFDNRYGTGQSTLDGIIRATNVLLAGKTTVVVGYGWCGKGTALRARGLGANV IVTEVDPVRAIEAIMDGFRVMPMAEAAPLGDLFITVTGNKHVIRGEHFNVMKDGAIVCNSGHFDIEIDLETLGKNADNVK TVRPFTQQYTLKNGKSVIVLGEGRLINLAAAEGHPSAVMDMSFANQALACEYLVKNKGKLQPGLHSIPTEVDKEIARLKL QAMGIGIDTLTDEQLEYMNSWTVGT
Sequences:
>Translated_425_residues MVATPVKIKYEVKDESLAVLGKQRIEWAGREMPVLRQIQERFAKEKPLSGIKLAACCHVTTETAHLAIALKNGGADAVLI ASNPLSTQDDVAASLVVDHGISVYAIKGEDEKTYLRHVEIALDHRPNIIIDDGSDVVATLVKNRQDQLPELIGTTEETTT GIVRLRAMFNDGVLTFPAMNVNDADTKHFFDNRYGTGQSTLDGIIRATNVLLAGKTTVVVGYGWCGKGTALRARGLGANV IVTEVDPVRAIEAIMDGFRVMPMAEAAPLGDLFITVTGNKHVIRGEHFNVMKDGAIVCNSGHFDIEIDLETLGKNADNVK TVRPFTQQYTLKNGKSVIVLGEGRLINLAAAEGHPSAVMDMSFANQALACEYLVKNKGKLQPGLHSIPTEVDKEIARLKL QAMGIGIDTLTDEQLEYMNSWTVGT >Mature_425_residues MVATPVKIKYEVKDESLAVLGKQRIEWAGREMPVLRQIQERFAKEKPLSGIKLAACCHVTTETAHLAIALKNGGADAVLI ASNPLSTQDDVAASLVVDHGISVYAIKGEDEKTYLRHVEIALDHRPNIIIDDGSDVVATLVKNRQDQLPELIGTTEETTT GIVRLRAMFNDGVLTFPAMNVNDADTKHFFDNRYGTGQSTLDGIIRATNVLLAGKTTVVVGYGWCGKGTALRARGLGANV IVTEVDPVRAIEAIMDGFRVMPMAEAAPLGDLFITVTGNKHVIRGEHFNVMKDGAIVCNSGHFDIEIDLETLGKNADNVK TVRPFTQQYTLKNGKSVIVLGEGRLINLAAAEGHPSAVMDMSFANQALACEYLVKNKGKLQPGLHSIPTEVDKEIARLKL QAMGIGIDTLTDEQLEYMNSWTVGT
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=415, Percent_Identity=44.3373493975904, Blast_Score=339, Evalue=3e-93, Organism=Homo sapiens, GI239937451, Length=390, Percent_Identity=44.8717948717949, Blast_Score=323, Evalue=1e-88, Organism=Homo sapiens, GI195539349, Length=413, Percent_Identity=37.5302663438257, Blast_Score=274, Evalue=1e-73, Organism=Homo sapiens, GI298286489, Length=413, Percent_Identity=37.5302663438257, Blast_Score=274, Evalue=1e-73, Organism=Homo sapiens, GI195539337, Length=413, Percent_Identity=37.5302663438257, Blast_Score=273, Evalue=2e-73, Organism=Homo sapiens, GI24308043, Length=413, Percent_Identity=37.5302663438257, Blast_Score=273, Evalue=2e-73, Organism=Homo sapiens, GI21361647, Length=413, Percent_Identity=37.772397094431, Blast_Score=254, Evalue=1e-67, Organism=Caenorhabditis elegans, GI17506425, Length=419, Percent_Identity=43.436754176611, Blast_Score=330, Evalue=7e-91, Organism=Saccharomyces cerevisiae, GI6320882, Length=428, Percent_Identity=41.8224299065421, Blast_Score=323, Evalue=2e-89, Organism=Drosophila melanogaster, GI24642172, Length=416, Percent_Identity=43.5096153846154, Blast_Score=326, Evalue=2e-89, Organism=Drosophila melanogaster, GI24656245, Length=403, Percent_Identity=38.2133995037221, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI45553387, Length=412, Percent_Identity=37.621359223301, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI45553385, Length=412, Percent_Identity=37.621359223301, Blast_Score=249, Evalue=2e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 46085; Mature: 46085
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS01034 GLYCOSYL_HYDROL_F16 ; PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVATPVKIKYEVKDESLAVLGKQRIEWAGREMPVLRQIQERFAKEKPLSGIKLAACCHVT CCCCCEEEEEEECCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEE TETAHLAIALKNGGADAVLIASNPLSTQDDVAASLVVDHGISVYAIKGEDEKTYLRHVEI ECCEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHEEECCEEEEEEECCCCCEEEEEEEE ALDHRPNIIIDDGSDVVATLVKNRQDQLPELIGTTEETTTGIVRLRAMFNDGVLTFPAMN EEECCCCEEEECCCHHHHHHHHCHHHHHHHHHCCCCHHHHHEEEEEEECCCCEEEEEECC VNDADTKHFFDNRYGTGQSTLDGIIRATNVLLAGKTTVVVGYGWCGKGTALRARGLGANV CCCCCCHHHHCCCCCCCHHHHHHHHHHHEEEEECCEEEEEEECCCCCCCEEEECCCCCEE IVTEVDPVRAIEAIMDGFRVMPMAEAAPLGDLFITVTGNKHVIRGEHFNVMKDGAIVCNS EEECCCHHHHHHHHHCCCEECCCCCCCCCCEEEEEEECCEEEEECCCCCEEECCEEEECC GHFDIEIDLETLGKNADNVKTVRPFTQQYTLKNGKSVIVLGEGRLINLAAAEGHPSAVMD CCEEEEEEHHHCCCCCCCCEEECCHHHHHEECCCCEEEEEECCCEEEEEECCCCCCEEEE MSFANQALACEYLVKNKGKLQPGLHSIPTEVDKEIARLKLQAMGIGIDTLTDEQLEYMNS HHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEEEEEECCCCCCCHHHHHHHCC WTVGT CCCCC >Mature Secondary Structure MVATPVKIKYEVKDESLAVLGKQRIEWAGREMPVLRQIQERFAKEKPLSGIKLAACCHVT CCCCCEEEEEEECCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEE TETAHLAIALKNGGADAVLIASNPLSTQDDVAASLVVDHGISVYAIKGEDEKTYLRHVEI ECCEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHEEECCEEEEEEECCCCCEEEEEEEE ALDHRPNIIIDDGSDVVATLVKNRQDQLPELIGTTEETTTGIVRLRAMFNDGVLTFPAMN EEECCCCEEEECCCHHHHHHHHCHHHHHHHHHCCCCHHHHHEEEEEEECCCCEEEEEECC VNDADTKHFFDNRYGTGQSTLDGIIRATNVLLAGKTTVVVGYGWCGKGTALRARGLGANV CCCCCCHHHHCCCCCCCHHHHHHHHHHHEEEEECCEEEEEEECCCCCCCEEEECCCCCEE IVTEVDPVRAIEAIMDGFRVMPMAEAAPLGDLFITVTGNKHVIRGEHFNVMKDGAIVCNS EEECCCHHHHHHHHHCCCEECCCCCCCCCCEEEEEEECCEEEEECCCCCEEECCEEEECC GHFDIEIDLETLGKNADNVKTVRPFTQQYTLKNGKSVIVLGEGRLINLAAAEGHPSAVMD CCEEEEEEHHHCCCCCCCCEEECCHHHHHEECCCCEEEEEECCCEEEEEECCCCCCEEEE MSFANQALACEYLVKNKGKLQPGLHSIPTEVDKEIARLKLQAMGIGIDTLTDEQLEYMNS HHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEEEEEECCCCCCCHHHHHHHCC WTVGT CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]