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The map label for this gene is 113476229

Identifier: 113476229

GI number: 113476229

Start: 4056388

End: 4057014

Strand: Reverse

Name: 113476229

Synonym: Tery_2622

Alternate gene names: NA

Gene position: 4057014-4056388 (Counterclockwise)

Preceding gene: 113476230

Following gene: 113476228

Centisome position: 52.35

GC content: 33.65

Gene sequence:

>627_bases
GTGGCTAAATTATCTGTAGAATTACAACAATATTTTTTTGATGAAAAACGAACTCCTCAAGTTACTTTGAGAGATATTAT
TGATTTAGCAGGAGAGAGAATTTTTGGCTTTTTATTCGTAATTTTGTCTCTACCTTCAGCTTTGCCTATACCTGCTCCTG
GTTATTCTATTCCATTTGGAATTTTATTGTTTTTATTGGCAGTTCAACTAATAATTGGTTCTACAACTCCCTGGTTACCT
CAGAGTTGGTTAAATAATACAATTTCTCTTCAGAAAGTACAAGGAATTTTGAACTCTGGTATTCCTTGGTTACGGAAAAT
TGAGTTGATATCTCGTCCTCGTTTGAGTTATATTTGTACGAGTATTATTGGTAGAATTGTGGTTGGTTGCGCGATCGCTC
TTATGGCTATCTCAATGATGATACCTATTCCTGGTACTAATACTTTACCAGCGATCGGGATTTTTGTTACTGGCTTTGGT
TTGTTAGATGATGATGGTTTTATTAGTCTGGTTGGTTTGGTACTCTGTTTAATGGGTGCAATTTTAAGCGGTCTAATTCT
GATATTTGGTTATGAGGTTGTTAAAGGTGGAATTAAATTAATTAAAAATTTTCTTACTTCAAATTAG

Upstream 100 bases:

>100_bases
AATAACAATTATTATTTATTTTAAGTAAAAATATCAAAAAGCATCTGGTTTATAATGGAGTTTTAACCGGATATATCTTA
ATTTTTAAAGTTATAAATCA

Downstream 100 bases:

>100_bases
CAGCTTTTAAGGATATCTGGGCATATTTTTCTAGTCTAATTATCTTTCCCTTTCGCACTTCAGTTAGATACAATTTATAT
CTTCAAAATACCCAAAACAA

Product: exopolysaccharide synthesis, ExoD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MAKLSVELQQYFFDEKRTPQVTLRDIIDLAGERIFGFLFVILSLPSALPIPAPGYSIPFGILLFLLAVQLIIGSTTPWLP
QSWLNNTISLQKVQGILNSGIPWLRKIELISRPRLSYICTSIIGRIVVGCAIALMAISMMIPIPGTNTLPAIGIFVTGFG
LLDDDGFISLVGLVLCLMGAILSGLILIFGYEVVKGGIKLIKNFLTSN

Sequences:

>Translated_208_residues
MAKLSVELQQYFFDEKRTPQVTLRDIIDLAGERIFGFLFVILSLPSALPIPAPGYSIPFGILLFLLAVQLIIGSTTPWLP
QSWLNNTISLQKVQGILNSGIPWLRKIELISRPRLSYICTSIIGRIVVGCAIALMAISMMIPIPGTNTLPAIGIFVTGFG
LLDDDGFISLVGLVLCLMGAILSGLILIFGYEVVKGGIKLIKNFLTSN
>Mature_207_residues
AKLSVELQQYFFDEKRTPQVTLRDIIDLAGERIFGFLFVILSLPSALPIPAPGYSIPFGILLFLLAVQLIIGSTTPWLPQ
SWLNNTISLQKVQGILNSGIPWLRKIELISRPRLSYICTSIIGRIVVGCAIALMAISMMIPIPGTNTLPAIGIFVTGFGL
LDDDGFISLVGLVLCLMGAILSGLILIFGYEVVKGGIKLIKNFLTSN

Specific function: Unknown

COG id: COG3932

COG function: function code R; Uncharacterized ABC-type transport system, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti exoD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010331 [H]

Pfam domain/function: PF06055 ExoD [H]

EC number: NA

Molecular weight: Translated: 22620; Mature: 22488

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLSVELQQYFFDEKRTPQVTLRDIIDLAGERIFGFLFVILSLPSALPIPAPGYSIPFG
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
ILLFLLAVQLIIGSTTPWLPQSWLNNTISLQKVQGILNSGIPWLRKIELISRPRLSYICT
HHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
SIIGRIVVGCAIALMAISMMIPIPGTNTLPAIGIFVTGFGLLDDDGFISLVGLVLCLMGA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
ILSGLILIFGYEVVKGGIKLIKNFLTSN
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKLSVELQQYFFDEKRTPQVTLRDIIDLAGERIFGFLFVILSLPSALPIPAPGYSIPFG
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
ILLFLLAVQLIIGSTTPWLPQSWLNNTISLQKVQGILNSGIPWLRKIELISRPRLSYICT
HHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
SIIGRIVVGCAIALMAISMMIPIPGTNTLPAIGIFVTGFGLLDDDGFISLVGLVLCLMGA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
ILSGLILIFGYEVVKGGIKLIKNFLTSN
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]