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The map label for this gene is 113476215

Identifier: 113476215

GI number: 113476215

Start: 4026713

End: 4028083

Strand: Reverse

Name: 113476215

Synonym: Tery_2608

Alternate gene names: NA

Gene position: 4028083-4026713 (Counterclockwise)

Preceding gene: 113476216

Following gene: 113476214

Centisome position: 51.97

GC content: 37.49

Gene sequence:

>1371_bases
GTGGTTTTTTTACTATTAATTTACTTGACTTTGGGTAAGCAAGAAATAAATGAAAATACTTCGGTAAAATCCTCTATTTT
TCTAGTTTTAAATACTGTATTAGGTTGGTTATATTTTGCTATATTGGAAAGTTCTCAAATACAAGGAACTTTAGGTAAAC
AGATAGTTGGAATTTCTGTAACAGACTTACGGGGAAATAAAATTTCTTTTGGCAAAGCAACAGCAAGATATTTCGGCAAG
TCATTTTTTCTTGTAGTTTGGATAGCTGCTACAATAGTGGCCATAATGGGTGAAGGGACAGGGTCTACAGATTCACCATA
CTTGATACTAGCTGGAATACTGTTTATTCTGGGATTAATTGTATTAGTTGTTGGTTATCTGATGGCTGCTTTTACCCCAG
AAAAACAGGCACTCCATGACATTATGGCAAGGTGTTTAGTGGAGAGAGCAAGTGGTCAACCTAGAGCTATTCCTTGGAAG
TCTTTAGTTGCTCTAGCCATAGCAGGGTTTTTCTCTAGTAAAATTTTAGCCATGATTCCTGAGGCACCCAATGATCCAAA
TAACGATACAATATCGGAACCAACTCCAACAGAAACTTCACCTCCCACTCGACCAAGGACAAAATATCCAAAGGTATCCA
CCAAAGAAAACAGAATTTTTGGCCCTCTTATTGAACCAGATGACAGGCTAAAAGAAGCCTTTAAAGGAGTATGGAAATTA
AGCTACAGTGTTGGCTTTGTTGTCCATGAAAGCCAGTTATCAATGACAGGACCTTCAGGAGTCATGTTCACTCAGTTTTT
TGATAGTGATATTAACCAAACTAAGACCATCCTACAAAAGATTGAGCTTTTGTCTTCTGCTAAAGGCCTAGTTTTATTAG
GTAGTGATCCGACCAATTTAGATTCTGGAGAAATAGACTCCGCCTACTCAGCGGATAATTTTCGCGTAGCACAAAGACCA
GATGGTACTTTTGAGTTTCGTAACTATTCTCTCAGTGATGATGGCTCTATATTTGAGTCACCAGTGGAAGCTGAATTTAG
TGGCTATCCAAAACTAGGTGTTCAAATGGCCGAGCTGACACGAGAAGTTAAACAGAAATTAAATACAGAAATTGGGAGCA
ACGTCATTACTGAAGAGCAAGGTGTTTTAGTTATTAAAGTTTTTGATGATTCTCCAGCAGAAAAAGCTAATATTAGGCCA
GGAGATGTACTTCAAGAAGTTAAGAATAGGACAGTTACTTCTCCGAGTCAAGTCCAGGAAATTGTCCAATCTTCATATTT
GTTTTTGCCTATTGATATACAATTGAATCGTAGCGGTGAAAACATAAATTTGAGTGTACAACCTGAATGTTGTATGACTC
AGGAAGAGTAA

Upstream 100 bases:

>100_bases
GACATTATCTATGGTTGTTTAGTTATTAAGAATATTTAAAAATGTCTCAAAAAAATATGCAATTTTTAATCAAATATTTG
TTGATATTTTAATTGATGGA

Downstream 100 bases:

>100_bases
ATAATTTGTCAATAATTCTGTCAAATTTATGGGTGTTAGTGTTTAAGGGGGAGCGAGGGTTAAGATTTAATTTTGTGTAA
TTAATTAATTTTGTCTAAGC

Product: RDD domain-containing protein

Products: NA

Alternate protein names: Peptidase S1 And S6 Chymotrypsin/Hap; Trypsin Domain Protein; HtrA2 Peptidase; Serine Proteinase; Serine Protease; RDD Family Protein; Periplasmic Serine Proteinase; Serine Protease Do-Like; RDD Domain-Containing Protein

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MVFLLLIYLTLGKQEINENTSVKSSIFLVLNTVLGWLYFAILESSQIQGTLGKQIVGISVTDLRGNKISFGKATARYFGK
SFFLVVWIAATIVAIMGEGTGSTDSPYLILAGILFILGLIVLVVGYLMAAFTPEKQALHDIMARCLVERASGQPRAIPWK
SLVALAIAGFFSSKILAMIPEAPNDPNNDTISEPTPTETSPPTRPRTKYPKVSTKENRIFGPLIEPDDRLKEAFKGVWKL
SYSVGFVVHESQLSMTGPSGVMFTQFFDSDINQTKTILQKIELLSSAKGLVLLGSDPTNLDSGEIDSAYSADNFRVAQRP
DGTFEFRNYSLSDDGSIFESPVEAEFSGYPKLGVQMAELTREVKQKLNTEIGSNVITEEQGVLVIKVFDDSPAEKANIRP
GDVLQEVKNRTVTSPSQVQEIVQSSYLFLPIDIQLNRSGENINLSVQPECCMTQEE

Sequences:

>Translated_456_residues
MVFLLLIYLTLGKQEINENTSVKSSIFLVLNTVLGWLYFAILESSQIQGTLGKQIVGISVTDLRGNKISFGKATARYFGK
SFFLVVWIAATIVAIMGEGTGSTDSPYLILAGILFILGLIVLVVGYLMAAFTPEKQALHDIMARCLVERASGQPRAIPWK
SLVALAIAGFFSSKILAMIPEAPNDPNNDTISEPTPTETSPPTRPRTKYPKVSTKENRIFGPLIEPDDRLKEAFKGVWKL
SYSVGFVVHESQLSMTGPSGVMFTQFFDSDINQTKTILQKIELLSSAKGLVLLGSDPTNLDSGEIDSAYSADNFRVAQRP
DGTFEFRNYSLSDDGSIFESPVEAEFSGYPKLGVQMAELTREVKQKLNTEIGSNVITEEQGVLVIKVFDDSPAEKANIRP
GDVLQEVKNRTVTSPSQVQEIVQSSYLFLPIDIQLNRSGENINLSVQPECCMTQEE
>Mature_456_residues
MVFLLLIYLTLGKQEINENTSVKSSIFLVLNTVLGWLYFAILESSQIQGTLGKQIVGISVTDLRGNKISFGKATARYFGK
SFFLVVWIAATIVAIMGEGTGSTDSPYLILAGILFILGLIVLVVGYLMAAFTPEKQALHDIMARCLVERASGQPRAIPWK
SLVALAIAGFFSSKILAMIPEAPNDPNNDTISEPTPTETSPPTRPRTKYPKVSTKENRIFGPLIEPDDRLKEAFKGVWKL
SYSVGFVVHESQLSMTGPSGVMFTQFFDSDINQTKTILQKIELLSSAKGLVLLGSDPTNLDSGEIDSAYSADNFRVAQRP
DGTFEFRNYSLSDDGSIFESPVEAEFSGYPKLGVQMAELTREVKQKLNTEIGSNVITEEQGVLVIKVFDDSPAEKANIRP
GDVLQEVKNRTVTSPSQVQEIVQSSYLFLPIDIQLNRSGENINLSVQPECCMTQEE

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50104; Mature: 50104

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFLLLIYLTLGKQEINENTSVKSSIFLVLNTVLGWLYFAILESSQIQGTLGKQIVGISV
CHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
TDLRGNKISFGKATARYFGKSFFLVVWIAATIVAIMGEGTGSTDSPYLILAGILFILGLI
EECCCCEEECCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
VLVVGYLMAAFTPEKQALHDIMARCLVERASGQPRAIPWKSLVALAIAGFFSSKILAMIP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEECC
EAPNDPNNDTISEPTPTETSPPTRPRTKYPKVSTKENRIFGPLIEPDDRLKEAFKGVWKL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHH
SYSVGFVVHESQLSMTGPSGVMFTQFFDSDINQTKTILQKIELLSSAKGLVLLGSDPTNL
HEEEEEEEEECEECCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
DSGEIDSAYSADNFRVAQRPDGTFEFRNYSLSDDGSIFESPVEAEFSGYPKLGVQMAELT
CCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHH
REVKQKLNTEIGSNVITEEQGVLVIKVFDDSPAEKANIRPGDVLQEVKNRTVTSPSQVQE
HHHHHHHHHHHCCCCEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHH
IVQSSYLFLPIDIQLNRSGENINLSVQPECCMTQEE
HHHCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MVFLLLIYLTLGKQEINENTSVKSSIFLVLNTVLGWLYFAILESSQIQGTLGKQIVGISV
CHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
TDLRGNKISFGKATARYFGKSFFLVVWIAATIVAIMGEGTGSTDSPYLILAGILFILGLI
EECCCCEEECCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
VLVVGYLMAAFTPEKQALHDIMARCLVERASGQPRAIPWKSLVALAIAGFFSSKILAMIP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEECC
EAPNDPNNDTISEPTPTETSPPTRPRTKYPKVSTKENRIFGPLIEPDDRLKEAFKGVWKL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHH
SYSVGFVVHESQLSMTGPSGVMFTQFFDSDINQTKTILQKIELLSSAKGLVLLGSDPTNL
HEEEEEEEEECEECCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
DSGEIDSAYSADNFRVAQRPDGTFEFRNYSLSDDGSIFESPVEAEFSGYPKLGVQMAELT
CCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHH
REVKQKLNTEIGSNVITEEQGVLVIKVFDDSPAEKANIRPGDVLQEVKNRTVTSPSQVQE
HHHHHHHHHHHCCCCEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHH
IVQSSYLFLPIDIQLNRSGENINLSVQPECCMTQEE
HHHCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA