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The map label for this gene is yvhJ [H]

Identifier: 113476211

GI number: 113476211

Start: 4022248

End: 4023663

Strand: Reverse

Name: yvhJ [H]

Synonym: Tery_2604

Alternate gene names: 113476211

Gene position: 4023663-4022248 (Counterclockwise)

Preceding gene: 113476212

Following gene: 113476210

Centisome position: 51.92

GC content: 36.72

Gene sequence:

>1416_bases
GTGCCCACTAATAAAATTTTAAATTCAACCCCTAATAAAGATTTAACAACAGAAAAACACCAGAAACAACCTACCCAATT
TAGAAAGAGACATTGGTTTGGGTTAGCTTTAGGTGTAGTCGGAGTGGCAATAACTTCTGCTACGGCAGGCGCTCTATTGG
CAGTAGCTTTTTCTAGCACTCCACTAATGCAACAAAGGTTATCTCCAGAAGATGCAGCAGTATTTTCTCAAAAAAACTTG
GCCAAAAGCAATATGAGGTTGCCAGAGTTAACTCGGCCTGTCAATATATTGTTGTTGGGAATTAAGGTATTAACATCAGA
TTTAAAAGAATATCCTCAGGATGATGATTTAGGTTACCATGCTTTGGTTAATTCTTTTAAAGGACTATCTGATACAATAC
TTATGGTTAGATTTGACCCTAAAAATCAGAAGTTAACCTTACTTTCTATTCCCAGAGATACTCGAACTTATGTAGAAGAT
CGAGGTTTAACTAAGATTAATGCTGCTAACTATTATGGAGGACCGGCAAAAAGTGCAAAAGCTGTTAGTGAACTTTTAGG
TGGAATAGGAATAGACCGCTACATTCGGGTCAATGTACAAGGTGTGGAAAAGTTGATAGATGCTCTTGGGGGTCTGAAAG
TTCATGTACCATTAGACATGAAATATCAGGATGATAGTCAACACCTTTATATTAATCTTAAAGCAGGTGAACAACATCTA
AATGGGAACCAAGTTCTACAATTTCTCAGATTTCGCTATGATAATTTAGGGGATATTGGGCGGGTACAACGGCAGCAACT
TTTGATGCGAGCTTTTATGGAACAGTCGGTCAATATGAAAACTCTATCCCGACTGCCAAAAATTCTTTCAGTAATTCAGT
CTCACATTGATACAAATTTGAGTGTAGAGGAATTAGTCGCTTTAATGAATTTTGCTGCTAAGATTAAACGACCTAATGTG
CAGATGTTGATGGTGCCCGGTGAGTTTAGCGATCCTAAGAAATATAAGTCTAGTTACTGGTTGCCTGATTTGACAACTTT
AGATAATATGATGTCTAAACACTTTGATTTTGGTTATCAGGCTTGGGAAGTAGAAAATTTAGATTATAACTATATTACGG
TAGCAGTTCAAGGTAGTACTGATAATTTGGAAGCTGTTGATGAATTAGTTATGTCTCTCAAAGAGACTGGTTATTGGCAT
GTTAAAGTTGCTAAACCCTGGAGTAAATCTTTAGAAGTAACTCGAATTATTGCTCAGAAAGGAGATCTTCAGGCCGCACA
AGCAGTTCAAAGGTCTCTTGGTTTTGGAGAAGTTTTTGTAGAAAGTACGGGTTCTTTAAGATCGGATGTGACTATTCAGT
TAGGAGAAGATGTGTTGTCAATTAAGGATAAATCTCAAAATTTACAAAATTGGTAA

Upstream 100 bases:

>100_bases
TCTATTTAACATTTTGCAAATTTAAATTTATTTAAATTTTTAGCGAAATTTGTCTAACAAAAAAACTTTTTATTTTAATA
CTTAGTGTGTGAGGAAAACA

Downstream 100 bases:

>100_bases
AAGTTGCTATTTTTTTGATCCACTGGTGTAGATTTGACATTTAGGGCATTAAAGTTTAAATATACTTGATTGATAGGGAC
ATTCTCTAGGAATGTTTTGA

Product: cell envelope-related transcriptional attenuator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MPTNKILNSTPNKDLTTEKHQKQPTQFRKRHWFGLALGVVGVAITSATAGALLAVAFSSTPLMQQRLSPEDAAVFSQKNL
AKSNMRLPELTRPVNILLLGIKVLTSDLKEYPQDDDLGYHALVNSFKGLSDTILMVRFDPKNQKLTLLSIPRDTRTYVED
RGLTKINAANYYGGPAKSAKAVSELLGGIGIDRYIRVNVQGVEKLIDALGGLKVHVPLDMKYQDDSQHLYINLKAGEQHL
NGNQVLQFLRFRYDNLGDIGRVQRQQLLMRAFMEQSVNMKTLSRLPKILSVIQSHIDTNLSVEELVALMNFAAKIKRPNV
QMLMVPGEFSDPKKYKSSYWLPDLTTLDNMMSKHFDFGYQAWEVENLDYNYITVAVQGSTDNLEAVDELVMSLKETGYWH
VKVAKPWSKSLEVTRIIAQKGDLQAAQAVQRSLGFGEVFVESTGSLRSDVTIQLGEDVLSIKDKSQNLQNW

Sequences:

>Translated_471_residues
MPTNKILNSTPNKDLTTEKHQKQPTQFRKRHWFGLALGVVGVAITSATAGALLAVAFSSTPLMQQRLSPEDAAVFSQKNL
AKSNMRLPELTRPVNILLLGIKVLTSDLKEYPQDDDLGYHALVNSFKGLSDTILMVRFDPKNQKLTLLSIPRDTRTYVED
RGLTKINAANYYGGPAKSAKAVSELLGGIGIDRYIRVNVQGVEKLIDALGGLKVHVPLDMKYQDDSQHLYINLKAGEQHL
NGNQVLQFLRFRYDNLGDIGRVQRQQLLMRAFMEQSVNMKTLSRLPKILSVIQSHIDTNLSVEELVALMNFAAKIKRPNV
QMLMVPGEFSDPKKYKSSYWLPDLTTLDNMMSKHFDFGYQAWEVENLDYNYITVAVQGSTDNLEAVDELVMSLKETGYWH
VKVAKPWSKSLEVTRIIAQKGDLQAAQAVQRSLGFGEVFVESTGSLRSDVTIQLGEDVLSIKDKSQNLQNW
>Mature_470_residues
PTNKILNSTPNKDLTTEKHQKQPTQFRKRHWFGLALGVVGVAITSATAGALLAVAFSSTPLMQQRLSPEDAAVFSQKNLA
KSNMRLPELTRPVNILLLGIKVLTSDLKEYPQDDDLGYHALVNSFKGLSDTILMVRFDPKNQKLTLLSIPRDTRTYVEDR
GLTKINAANYYGGPAKSAKAVSELLGGIGIDRYIRVNVQGVEKLIDALGGLKVHVPLDMKYQDDSQHLYINLKAGEQHLN
GNQVLQFLRFRYDNLGDIGRVQRQQLLMRAFMEQSVNMKTLSRLPKILSVIQSHIDTNLSVEELVALMNFAAKIKRPNVQ
MLMVPGEFSDPKKYKSSYWLPDLTTLDNMMSKHFDFGYQAWEVENLDYNYITVAVQGSTDNLEAVDELVMSLKETGYWHV
KVAKPWSKSLEVTRIIAQKGDLQAAQAVQRSLGFGEVFVESTGSLRSDVTIQLGEDVLSIKDKSQNLQNW

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 52888; Mature: 52756

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTNKILNSTPNKDLTTEKHQKQPTQFRKRHWFGLALGVVGVAITSATAGALLAVAFSST
CCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLMQQRLSPEDAAVFSQKNLAKSNMRLPELTRPVNILLLGIKVLTSDLKEYPQDDDLGYH
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHH
ALVNSFKGLSDTILMVRFDPKNQKLTLLSIPRDTRTYVEDRGLTKINAANYYGGPAKSAK
HHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHCCCCEEEECCCCCCCCCHHHH
AVSELLGGIGIDRYIRVNVQGVEKLIDALGGLKVHVPLDMKYQDDSQHLYINLKAGEQHL
HHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCEEEEEEECCEECCCCCEEEEEEECCCCCC
NGNQVLQFLRFRYDNLGDIGRVQRQQLLMRAFMEQSVNMKTLSRLPKILSVIQSHIDTNL
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
SVEELVALMNFAAKIKRPNVQMLMVPGEFSDPKKYKSSYWLPDLTTLDNMMSKHFDFGYQ
CHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCE
AWEVENLDYNYITVAVQGSTDNLEAVDELVMSLKETGYWHVKVAKPWSKSLEVTRIIAQK
EEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHC
GDLQAAQAVQRSLGFGEVFVESTGSLRSDVTIQLGEDVLSIKDKSQNLQNW
CCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PTNKILNSTPNKDLTTEKHQKQPTQFRKRHWFGLALGVVGVAITSATAGALLAVAFSST
CCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLMQQRLSPEDAAVFSQKNLAKSNMRLPELTRPVNILLLGIKVLTSDLKEYPQDDDLGYH
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHH
ALVNSFKGLSDTILMVRFDPKNQKLTLLSIPRDTRTYVEDRGLTKINAANYYGGPAKSAK
HHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHCCCCEEEECCCCCCCCCHHHH
AVSELLGGIGIDRYIRVNVQGVEKLIDALGGLKVHVPLDMKYQDDSQHLYINLKAGEQHL
HHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCEEEEEEECCEECCCCCEEEEEEECCCCCC
NGNQVLQFLRFRYDNLGDIGRVQRQQLLMRAFMEQSVNMKTLSRLPKILSVIQSHIDTNL
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
SVEELVALMNFAAKIKRPNVQMLMVPGEFSDPKKYKSSYWLPDLTTLDNMMSKHFDFGYQ
CHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCE
AWEVENLDYNYITVAVQGSTDNLEAVDELVMSLKETGYWHVKVAKPWSKSLEVTRIIAQK
EEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHC
GDLQAAQAVQRSLGFGEVFVESTGSLRSDVTIQLGEDVLSIKDKSQNLQNW
CCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]