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The map label for this gene is ybiX [C]

Identifier: 113476208

GI number: 113476208

Start: 4018528

End: 4019160

Strand: Reverse

Name: ybiX [C]

Synonym: Tery_2601

Alternate gene names: 113476208

Gene position: 4019160-4018528 (Counterclockwise)

Preceding gene: 113476209

Following gene: 113476207

Centisome position: 51.86

GC content: 33.97

Gene sequence:

>633_bases
ATGGTTTGGATTTATCCTCAACAAAAATATCGTCAAATTAAATATGCTTATTATGACGCTAGTCAAAAAGAGCATTTTTG
TCAACCAGGTGAAAATTGGGGAGCTTTTACAGCACAAGAATGTGAAAGGGTGATTTCTTTATCAAAAGAAATGAAGTTAT
CAAAGGGAATTGTAGATGGAAAAATAAAGCCTGAAATTCGCCAAGTAAATGTGTGGGGTCTGAGTTATTCAGAGTCAACA
AGATGGCTTTGGGAAAAGTTAATAAACAGTGTTAAATATGCTAACAATAAGTGGTGGAATTATGATATTTATGGTATCAT
GGATAGTATGCAACTTTTATGTTATGAAGCTAGTAAAAATCAGGAAAGTATTCAAGATCACTACAATAAGCATATAGACG
TTGGAGAAGCTTATTATTATCGCAAAATTTCTATCTCAATTCAACTTTCTGACCCCCAAGATTATGAAGGTTCAGAACTG
AAGTTATACACTCGAAGAGAAGCTGAAAATTTGCCAAAAGCTAGAGGAACAATGATCTTATTTCCTTCTTTTGTTCTCCA
TGAAGTTACACCAATTATTAAAGGAAAAAGATGGGCACTTGTTTGTTGGGTTTGCGGTCCTCAATTCCGATAG

Upstream 100 bases:

>100_bases
AGTAGGGAATAGATTATGGGGATTAGGTGAGAAAAACTGCTGATTGTATTGCCTACGCCAAAAGTGTATAAATCGTTTTA
AAAAGTGAAATTAAGACAAT

Downstream 100 bases:

>100_bases
TTTGAGAAACAATAGCCTAACTTCATATAGAAATATTTATTGCCTTAAGTAAAATTCAATTTAGATTATCTAAAAATTAG
TTTTTTTTTAGTTAAGTTGA

Product: 2OG-Fe(II) oxygenase

Products: NA

Alternate protein names: Oxidoreductase 2OG-Fe(II) Oxygenase Family; Oxygenase; Oxidoreductase Domain Protein; Prolyl 4-Hydroxylase Alpha Subunit

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MVWIYPQQKYRQIKYAYYDASQKEHFCQPGENWGAFTAQECERVISLSKEMKLSKGIVDGKIKPEIRQVNVWGLSYSEST
RWLWEKLINSVKYANNKWWNYDIYGIMDSMQLLCYEASKNQESIQDHYNKHIDVGEAYYYRKISISIQLSDPQDYEGSEL
KLYTRREAENLPKARGTMILFPSFVLHEVTPIIKGKRWALVCWVCGPQFR

Sequences:

>Translated_210_residues
MVWIYPQQKYRQIKYAYYDASQKEHFCQPGENWGAFTAQECERVISLSKEMKLSKGIVDGKIKPEIRQVNVWGLSYSEST
RWLWEKLINSVKYANNKWWNYDIYGIMDSMQLLCYEASKNQESIQDHYNKHIDVGEAYYYRKISISIQLSDPQDYEGSEL
KLYTRREAENLPKARGTMILFPSFVLHEVTPIIKGKRWALVCWVCGPQFR
>Mature_210_residues
MVWIYPQQKYRQIKYAYYDASQKEHFCQPGENWGAFTAQECERVISLSKEMKLSKGIVDGKIKPEIRQVNVWGLSYSEST
RWLWEKLINSVKYANNKWWNYDIYGIMDSMQLLCYEASKNQESIQDHYNKHIDVGEAYYYRKISISIQLSDPQDYEGSEL
KLYTRREAENLPKARGTMILFPSFVLHEVTPIIKGKRWALVCWVCGPQFR

Specific function: Unknown

COG id: COG3128

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.14.11.- [C]

Molecular weight: Translated: 24922; Mature: 24922

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWIYPQQKYRQIKYAYYDASQKEHFCQPGENWGAFTAQECERVISLSKEMKLSKGIVDG
CEEECCHHHHHEEEEEEECCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
KIKPEIRQVNVWGLSYSESTRWLWEKLINSVKYANNKWWNYDIYGIMDSMQLLCYEASKN
CCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHEEEECCCCC
QESIQDHYNKHIDVGEAYYYRKISISIQLSDPQDYEGSELKLYTRREAENLPKARGTMIL
HHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEECCCHHCCCCCCCCEEE
FPSFVLHEVTPIIKGKRWALVCWVCGPQFR
ECHHHHHHHHHHHCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MVWIYPQQKYRQIKYAYYDASQKEHFCQPGENWGAFTAQECERVISLSKEMKLSKGIVDG
CEEECCHHHHHEEEEEEECCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
KIKPEIRQVNVWGLSYSESTRWLWEKLINSVKYANNKWWNYDIYGIMDSMQLLCYEASKN
CCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHEEEECCCCC
QESIQDHYNKHIDVGEAYYYRKISISIQLSDPQDYEGSELKLYTRREAENLPKARGTMIL
HHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEECCCHHCCCCCCCCEEE
FPSFVLHEVTPIIKGKRWALVCWVCGPQFR
ECHHHHHHHHHHHCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA