| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113476203
Identifier: 113476203
GI number: 113476203
Start: 4008444
End: 4008809
Strand: Reverse
Name: 113476203
Synonym: Tery_2594
Alternate gene names: NA
Gene position: 4008809-4008444 (Counterclockwise)
Preceding gene: 113476206
Following gene: 113476198
Centisome position: 51.73
GC content: 27.6
Gene sequence:
>366_bases TTGGCAAGAAGCCAAATTTTGCAGCAACTTAATCATCCTATAGTTCCCAAAGTAGTATCAGATGGATATTTTATTTGGGA TGTTAAAACTAACATTTATCACTTCTTAATTATAGAAAAAATAGCAAGAGATAATTTAATAACTTGGATGTCAAAAACAG GGAAAATTTTTATTAGTGAAGAGTTAGTAATAAATTGGTTAAAACAATTATTAGAAATTCTAGATTATTTGCACAACCAG AATTATATTCACCGGGATATTAAACCTACTAATATTATAGTCAAAGCAAATCTAGATTTAGTGCCAATTGATTTTGGTAC TGCGAGGAAAATTAACTATACTTATTTTTTTTGCCAAACGAAATGA
Upstream 100 bases:
>100_bases GTAGCTGTGGTGAAGTATGGGAAGTGGAAGAAAGAGGTACGAGAAAAAAAGTGATTAAAGTGATAGGTAGTTTTTGTGAA GAAAAACAGATCTGTCTATT
Downstream 100 bases:
>100_bases TAATCAACTAACAAAAGTTGCTACATATTATGCACCTCTAGAACAAATTAAGGGAAAGGTTATACCTCAATCAGAATTTT TTGGCTTTGGGGCGTACTGG
Product: Ser/thr protein kinase
Products: NA
Alternate protein names: Serine/Threonine Kinase; TPR Repeat-Containing Serine/Threonin Protein Kinase; Protein Kinase; Protein Kinase Domain; Ser/Thr Protein Kinase; WD-40 Repeat-Containing Serine/Threonin Protein Kinase; Tetratricopeptide Repeat Domain Protein; Serine/Threonine Sensor; RIO1 Family; WD40 Repeat-Containing Serine/Threonine Protein Kinase; WD-40 Repeat-Containing Protein
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MARSQILQQLNHPIVPKVVSDGYFIWDVKTNIYHFLIIEKIARDNLITWMSKTGKIFISEELVINWLKQLLEILDYLHNQ NYIHRDIKPTNIIVKANLDLVPIDFGTARKINYTYFFCQTK
Sequences:
>Translated_121_residues MARSQILQQLNHPIVPKVVSDGYFIWDVKTNIYHFLIIEKIARDNLITWMSKTGKIFISEELVINWLKQLLEILDYLHNQ NYIHRDIKPTNIIVKANLDLVPIDFGTARKINYTYFFCQTK >Mature_120_residues ARSQILQQLNHPIVPKVVSDGYFIWDVKTNIYHFLIIEKIARDNLITWMSKTGKIFISEELVINWLKQLLEILDYLHNQN YIHRDIKPTNIIVKANLDLVPIDFGTARKINYTYFFCQTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14366; Mature: 14235
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS00108 PROTEIN_KINASE_ST ; PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSQILQQLNHPIVPKVVSDGYFIWDVKTNIYHFLIIEKIARDNLITWMSKTGKIFISE CCHHHHHHHHCCCCCCEEECCCEEEEEECCCEEEHHHHHHHHHCCCEEEECCCCEEEEEH ELVINWLKQLLEILDYLHNQNYIHRDIKPTNIIVKANLDLVPIDFGTARKINYTYFFCQT HHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCEEEECCCCCEEEEEEEEEEEC K C >Mature Secondary Structure ARSQILQQLNHPIVPKVVSDGYFIWDVKTNIYHFLIIEKIARDNLITWMSKTGKIFISE CHHHHHHHHCCCCCCEEECCCEEEEEECCCEEEHHHHHHHHHCCCEEEECCCCEEEEEH ELVINWLKQLLEILDYLHNQNYIHRDIKPTNIIVKANLDLVPIDFGTARKINYTYFFCQT HHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCEEEECCCCCEEEEEEEEEEEC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA