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The map label for this gene is hypD [C]

Identifier: 113476181

GI number: 113476181

Start: 3969436

End: 3969624

Strand: Reverse

Name: hypD [C]

Synonym: Tery_2572

Alternate gene names: 113476181

Gene position: 3969624-3969436 (Counterclockwise)

Preceding gene: 113476182

Following gene: 113476179

Centisome position: 51.22

GC content: 39.68

Gene sequence:

>189_bases
GTGCCTACTCTCAAAGCCATTATGGACTCCCGAATTTTACCTATAGATGGATTCATCGCACCAGCTCAACTAATTGCTAC
CTTTGAACTGGAACCCTATCAGTTTTTAGTTGGTTACTATTGCAAACCCTTAGTTGTTGCCGAAGTTACTCCTATTTCCA
TGCTCAAAGCTAAATTGATGCTACTATAA

Upstream 100 bases:

>100_bases
AGGCTTTGAAGACAGCACTGCCAAAACAGCCCAGACTTTTCTACAAGCATAATCCAAGCAGATTGACAACTTTAGTGTCT
ATTGTAACCACATCTCAATT

Downstream 100 bases:

>100_bases
CAACTGGTTGATAGTCGTGCAGAACTTTCCACCCTTGAATTAGAATTACTCTCAGCCTCTCTTAGCTTAGAAGCAATGCA
AGCTATCAGCCGAGTGTACA

Product: hydrogenase formation HypD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MPTLKAIMDSRILPIDGFIAPAQLIATFELEPYQFLVGYYCKPLVVAEVTPISMLKAKLMLL

Sequences:

>Translated_62_residues
MPTLKAIMDSRILPIDGFIAPAQLIATFELEPYQFLVGYYCKPLVVAEVTPISMLKAKLMLL
>Mature_61_residues
PTLKAIMDSRILPIDGFIAPAQLIATFELEPYQFLVGYYCKPLVVAEVTPISMLKAKLMLL

Specific function: Required For The Formation Of All Three Hydrogenase Isoenzymes. [C]

COG id: COG0409

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6928; Mature: 6796

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLKAIMDSRILPIDGFIAPAQLIATFELEPYQFLVGYYCKPLVVAEVTPISMLKAKLM
CCCHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHH
LL
CC
>Mature Secondary Structure 
PTLKAIMDSRILPIDGFIAPAQLIATFELEPYQFLVGYYCKPLVVAEVTPISMLKAKLM
CCHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHH
LL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA