| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476102
Identifier: 113476102
GI number: 113476102
Start: 3825145
End: 3825366
Strand: Reverse
Name: 113476102
Synonym: Tery_2482
Alternate gene names: NA
Gene position: 3825366-3825145 (Counterclockwise)
Preceding gene: 113476107
Following gene: 113476101
Centisome position: 49.36
GC content: 38.74
Gene sequence:
>222_bases ATGGAAATACGGGCTCACGTTGAGGGCTGTGGTTTAAGAGGGATTAGTCGAACAGTGAATTTTGCCTATAATACCGTAGT TAGTTTGGTGAGAGCTACTTCTGAAAAAGGACAAATGATCCATAATGCTCATTTCCAGAATATCAATACTTCACAAGTGA GCAGTGATGAGTTTTGGTCATTCGTCCAAAAAAATAAAAACAGTGCCAGTATCAGGAATTGA
Upstream 100 bases:
>100_bases ATTGATAATTATTATTAATAGTTGATGTAATATATATTTTTATGTCTAATTTACTAATTGTTATAAGTCAATACGGTTCA GTTAAGGCTGAAAGCAGCGG
Downstream 100 bases:
>100_bases TAAAAGGATATTCTTGGGTTGGCATGACCTAAGCTTTATCCAGTGGATGAATTCTGAGTGCTAGAGTAGATAAATATACT GACTAGTTTATTGAGGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MEIRAHVEGCGLRGISRTVNFAYNTVVSLVRATSEKGQMIHNAHFQNINTSQVSSDEFWSFVQKNKNSASIRN
Sequences:
>Translated_73_residues MEIRAHVEGCGLRGISRTVNFAYNTVVSLVRATSEKGQMIHNAHFQNINTSQVSSDEFWSFVQKNKNSASIRN >Mature_73_residues MEIRAHVEGCGLRGISRTVNFAYNTVVSLVRATSEKGQMIHNAHFQNINTSQVSSDEFWSFVQKNKNSASIRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8213; Mature: 8213
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIRAHVEGCGLRGISRTVNFAYNTVVSLVRATSEKGQMIHNAHFQNINTSQVSSDEFWS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCHHHHHH FVQKNKNSASIRN HHHCCCCCCCCCC >Mature Secondary Structure MEIRAHVEGCGLRGISRTVNFAYNTVVSLVRATSEKGQMIHNAHFQNINTSQVSSDEFWS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCHHHHHH FVQKNKNSASIRN HHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA