| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476094
Identifier: 113476094
GI number: 113476094
Start: 3803725
End: 3804468
Strand: Reverse
Name: 113476094
Synonym: Tery_2472
Alternate gene names: NA
Gene position: 3804468-3803725 (Counterclockwise)
Preceding gene: 113476095
Following gene: 113476093
Centisome position: 49.09
GC content: 41.94
Gene sequence:
>744_bases ATGACTCTCATGACTTTTTTTAAGAATTTTTGGTCTATTTCTTTCTTTCTGCCCCTGAGCTTGGTTGTTACTGCTGTTCC TCTCCAAGCTCAACGCCTACCTCTATCGGAAAACCTGACTTCTCTCCTTTCCCCTGAAGGCCAAACTCTACTCCAAACCA GCAAAGCTCAAACAGACTACATTCCTCTGATGAGTCAGTTCGTTACCCAAGTCAATGGAGCATTTTGTGGTGTGGCGAGT GCGGTTATGGTACTTAATGCTCTAGAAGTTCCTTCTACTGCTCCTTCTCCCTGGCCACAACGTTATTTTACCCAGGATAA TATTTTTAATGAGAAAACTGAGGAAGTTATCCCCCGTAGTGTTATTACTAGACGGGGAATGACTCTGGCACAGCTGTCGG ACTTCATTGCTACCTATAGTGTTGAAGTCAAAACTTTCTATGGTAGCGATATTAGTTTGGAGCAGTTTCGAGGGCTCATT CGCGAGAATTTGGTGAATGATAACAACTTTGTGTTAATTAATTATCTAGGCCAGGCTATCGGACAAAAACGAGGGGGTCA TATTTCTCCTATTGCTGCTTATAATGAGGAAAGTGACCAGTTTTTGGTTCTAGATGTATCTCGTTACAAGTACCCTCCCG TTTGGGTGGATACAAAGACTCTCTGGGCATCAACGAATACTATCGATAAAACATCTAAAAAAACACGGGGCATTGTTTTA ATTTCTCCTCTTTCTCAACTCTAA
Upstream 100 bases:
>100_bases CTTTGAAAGGGCTTTACTTGCAAATATTACTACTGATATTTAGTCTGAAATAAAACCTACCTCTGCTATAATTACTGAAA GCTTTTGAAATGCTAGCTTA
Downstream 100 bases:
>100_bases TAAATCAAATTTTATTAATTATTAATAATAACTATGGATAAAAAAAATTTAAGGCAAGCTTTAGTCGTTGGAATTAACCG TTATCCTTTGTTGAAAAAGA
Product: phytochelatin synthase-like
Products: NA
Alternate protein names: Phytochelatin Synthase-Like Protein; Phytochelatin Synthase Family; Glutathione Gamma-Glutamylcysteinyltransferase; Phytochelatin Synthase Family Protein; Phytochelatin Synthase-Like
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTLMTFFKNFWSISFFLPLSLVVTAVPLQAQRLPLSENLTSLLSPEGQTLLQTSKAQTDYIPLMSQFVTQVNGAFCGVAS AVMVLNALEVPSTAPSPWPQRYFTQDNIFNEKTEEVIPRSVITRRGMTLAQLSDFIATYSVEVKTFYGSDISLEQFRGLI RENLVNDNNFVLINYLGQAIGQKRGGHISPIAAYNEESDQFLVLDVSRYKYPPVWVDTKTLWASTNTIDKTSKKTRGIVL ISPLSQL
Sequences:
>Translated_247_residues MTLMTFFKNFWSISFFLPLSLVVTAVPLQAQRLPLSENLTSLLSPEGQTLLQTSKAQTDYIPLMSQFVTQVNGAFCGVAS AVMVLNALEVPSTAPSPWPQRYFTQDNIFNEKTEEVIPRSVITRRGMTLAQLSDFIATYSVEVKTFYGSDISLEQFRGLI RENLVNDNNFVLINYLGQAIGQKRGGHISPIAAYNEESDQFLVLDVSRYKYPPVWVDTKTLWASTNTIDKTSKKTRGIVL ISPLSQL >Mature_246_residues TLMTFFKNFWSISFFLPLSLVVTAVPLQAQRLPLSENLTSLLSPEGQTLLQTSKAQTDYIPLMSQFVTQVNGAFCGVASA VMVLNALEVPSTAPSPWPQRYFTQDNIFNEKTEEVIPRSVITRRGMTLAQLSDFIATYSVEVKTFYGSDISLEQFRGLIR ENLVNDNNFVLINYLGQAIGQKRGGHISPIAAYNEESDQFLVLDVSRYKYPPVWVDTKTLWASTNTIDKTSKKTRGIVLI SPLSQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI193204635, Length=213, Percent_Identity=33.8028169014084, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI193204637, Length=213, Percent_Identity=33.8028169014084, Blast_Score=122, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27687; Mature: 27556
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: PS00063 ALDOKETO_REDUCTASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLMTFFKNFWSISFFLPLSLVVTAVPLQAQRLPLSENLTSLLSPEGQTLLQTSKAQTDY CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCCHHHHHCCCCCHH IPLMSQFVTQVNGAFCGVASAVMVLNALEVPSTAPSPWPQRYFTQDNIFNEKTEEVIPRS HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHH VITRRGMTLAQLSDFIATYSVEVKTFYGSDISLEQFRGLIRENLVNDNNFVLINYLGQAI HHHHCCCHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHH GQKRGGHISPIAAYNEESDQFLVLDVSRYKYPPVWVDTKTLWASTNTIDKTSKKTRGIVL HHCCCCCCCCEEECCCCCCCEEEEEHHHCCCCCEEEECHHEEECCCCCHHCCHHHCCEEE ISPLSQL ECCHHCC >Mature Secondary Structure TLMTFFKNFWSISFFLPLSLVVTAVPLQAQRLPLSENLTSLLSPEGQTLLQTSKAQTDY HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCCHHHHHCCCCCHH IPLMSQFVTQVNGAFCGVASAVMVLNALEVPSTAPSPWPQRYFTQDNIFNEKTEEVIPRS HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHH VITRRGMTLAQLSDFIATYSVEVKTFYGSDISLEQFRGLIRENLVNDNNFVLINYLGQAI HHHHCCCHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHH GQKRGGHISPIAAYNEESDQFLVLDVSRYKYPPVWVDTKTLWASTNTIDKTSKKTRGIVL HHCCCCCCCCEEECCCCCCCEEEEEHHHCCCCCEEEECHHEEECCCCCHHCCHHHCCEEE ISPLSQL ECCHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA