Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113476042
Identifier: 113476042
GI number: 113476042
Start: 3721862
End: 3722185
Strand: Reverse
Name: 113476042
Synonym: Tery_2413
Alternate gene names: NA
Gene position: 3722185-3721862 (Counterclockwise)
Preceding gene: 113476043
Following gene: 113476039
Centisome position: 48.03
GC content: 30.25
Gene sequence:
>324_bases ATGGAAGCTGATAATTTTTTTAATTCCCAATATTTTCAAGATAGATATCGAGATAAATTGACAGATGAGTCTCCAGATAA ATTTTATAAACAGTTTAATTCCCAATATTTTCAAGATAAGTCTTCAGACAAATTTACAGACGAATATTCAGATACACTAG AATCATATTTAACTTCAAGGTACGTTCCAGATATTAGCCGGCAAAATTCTCCAGATAAATCTCTAGCAAAACCAGATAAT TCCCCAGAAAAAGTTGAATTATCGTCAATATTAAGTAAGTTAGTTATAGATAGTAATTCTAGTGCCTGGATGAGTTGGCA ATAA
Upstream 100 bases:
>100_bases CTCACTAACTTATGAAAAAAGTTTGCCACTATTGGAATCTGCAATAGAAAAGAGTATTAGTTTTCCAGAAGAAAAAGTGA AATTTAAACTATGTGATTTT
Downstream 100 bases:
>100_bases CTTTCAAATATTCTTGACAAAGACGATATAAAACGAACTATTTTTATGGATAAAATTATAGAAAAATACTTTCTTATTGA GAGGCTAGAAACATGGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MEADNFFNSQYFQDRYRDKLTDESPDKFYKQFNSQYFQDKSSDKFTDEYSDTLESYLTSRYVPDISRQNSPDKSLAKPDN SPEKVELSSILSKLVIDSNSSAWMSWQ
Sequences:
>Translated_107_residues MEADNFFNSQYFQDRYRDKLTDESPDKFYKQFNSQYFQDKSSDKFTDEYSDTLESYLTSRYVPDISRQNSPDKSLAKPDN SPEKVELSSILSKLVIDSNSSAWMSWQ >Mature_107_residues MEADNFFNSQYFQDRYRDKLTDESPDKFYKQFNSQYFQDKSSDKFTDEYSDTLESYLTSRYVPDISRQNSPDKSLAKPDN SPEKVELSSILSKLVIDSNSSAWMSWQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12643; Mature: 12643
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEADNFFNSQYFQDRYRDKLTDESPDKFYKQFNSQYFQDKSSDKFTDEYSDTLESYLTSR CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH YVPDISRQNSPDKSLAKPDNSPEKVELSSILSKLVIDSNSSAWMSWQ CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MEADNFFNSQYFQDRYRDKLTDESPDKFYKQFNSQYFQDKSSDKFTDEYSDTLESYLTSR CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH YVPDISRQNSPDKSLAKPDNSPEKVELSSILSKLVIDSNSSAWMSWQ CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA