The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476024

Identifier: 113476024

GI number: 113476024

Start: 3698168

End: 3699247

Strand: Reverse

Name: 113476024

Synonym: Tery_2394

Alternate gene names: NA

Gene position: 3699247-3698168 (Counterclockwise)

Preceding gene: 113476026

Following gene: 113476020

Centisome position: 47.73

GC content: 34.81

Gene sequence:

>1080_bases
GTGAAATCAATAAATGAATTTTCAGGCATAGATATGGCCCAAGAACAGGATCAAGAGACTAATAATACTAATACTTTAGC
TGTGACAGATACGAAACCATTAAATTTTGCTAAATCTAACTACGAGGAAGAAACTACAACTAATACTCTGACTCATAATA
TTACCACTGTACGACAACATCCAATTGCTCCCCCTAGCGAACCCCAACAGTACCGGGCCATAGGTTTAGTTCGAGGTCGT
TATCAACCTTCTACAGAACAATTTACACGAGGTAGCCTACGAACACCAGATGATTCAGAAATAGATGCTGTATTGTTAGG
CCGGGTAATGAGTCTATTAAAAAATCATTTAGATCTAGAGTCAGATCATCTCTGGGTAGTTTATCCTCGTACCAGACAAG
AAAATAATGACCTACATATTCAAATTATGGGGGTATGGGAACCAGAAACTCTAGGAACCAAGGCAAAATTCTCTACTGAA
TTAACAAATGAAGAACAGCAACAAACAACTTCATCTCTAAGTATTTCTCCCACCGTTGAAGATAACCAAAGTCAAGAAAT
ACCAGAAGTATCAGAAAATATAGATAATTCTCAACCAAGTACTGTTTTTCCTAGTCCGGAAACTGAGATAGATGATTTAG
TTACTTTAGGTGATGGTTATTTTTCTATTCGAGGAGAAGTGATTTATCAATCTCAAGAGGAAGAATATGTAGTAGTTAAG
GTACAACAATTAGCCCGCAAAGGTGAAGAAACTTCTAAGTTTTTTAAGCTGAAACTTAAAGGGAATTTAGGCGATCGCCC
ATTGAATCATTTCTGGGATTTACATATTCAGCGCCAGAATACATCTCTTGTTATTCAATATGCTAATGATATTGGTAGTC
TGTTTTTAAATAATCGTCGCCAATTTATATCAAAGGACAAAAGAACATTTAATAATAGAGATAATTATAGAAAAAGTAGT
TATTCACAAGGGTTTTCTCACAAAAGTGATAATTATGTAACAAGTTCAATTCCTATTCGTAAAGAACCTCTTCCTAAACC
AATTAAAAGAAATCAAAACTCAAGTGAGCAAGGGAATTAA

Upstream 100 bases:

>100_bases
AACAGATCACAAGGCCTATCCCAATGAGCAAGCTATTAATAAACCAGATATTAAGCAAAGTCTTCCTAGAAAAACTAATG
CTTTAAGTTATGATACCTCT

Downstream 100 bases:

>100_bases
TTTTTTCAGTAAAGTTTAGGAAAATGCCGGTTTTTTTTGTGGAGAACTTAACGTTCCAGAAATGGTAAGAAAGTTCGATC
CATCGGAAGTTGAGCAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKSINEFSGIDMAQEQDQETNNTNTLAVTDTKPLNFAKSNYEEETTTNTLTHNITTVRQHPIAPPSEPQQYRAIGLVRGR
YQPSTEQFTRGSLRTPDDSEIDAVLLGRVMSLLKNHLDLESDHLWVVYPRTRQENNDLHIQIMGVWEPETLGTKAKFSTE
LTNEEQQQTTSSLSISPTVEDNQSQEIPEVSENIDNSQPSTVFPSPETEIDDLVTLGDGYFSIRGEVIYQSQEEEYVVVK
VQQLARKGEETSKFFKLKLKGNLGDRPLNHFWDLHIQRQNTSLVIQYANDIGSLFLNNRRQFISKDKRTFNNRDNYRKSS
YSQGFSHKSDNYVTSSIPIRKEPLPKPIKRNQNSSEQGN

Sequences:

>Translated_359_residues
MKSINEFSGIDMAQEQDQETNNTNTLAVTDTKPLNFAKSNYEEETTTNTLTHNITTVRQHPIAPPSEPQQYRAIGLVRGR
YQPSTEQFTRGSLRTPDDSEIDAVLLGRVMSLLKNHLDLESDHLWVVYPRTRQENNDLHIQIMGVWEPETLGTKAKFSTE
LTNEEQQQTTSSLSISPTVEDNQSQEIPEVSENIDNSQPSTVFPSPETEIDDLVTLGDGYFSIRGEVIYQSQEEEYVVVK
VQQLARKGEETSKFFKLKLKGNLGDRPLNHFWDLHIQRQNTSLVIQYANDIGSLFLNNRRQFISKDKRTFNNRDNYRKSS
YSQGFSHKSDNYVTSSIPIRKEPLPKPIKRNQNSSEQGN
>Mature_359_residues
MKSINEFSGIDMAQEQDQETNNTNTLAVTDTKPLNFAKSNYEEETTTNTLTHNITTVRQHPIAPPSEPQQYRAIGLVRGR
YQPSTEQFTRGSLRTPDDSEIDAVLLGRVMSLLKNHLDLESDHLWVVYPRTRQENNDLHIQIMGVWEPETLGTKAKFSTE
LTNEEQQQTTSSLSISPTVEDNQSQEIPEVSENIDNSQPSTVFPSPETEIDDLVTLGDGYFSIRGEVIYQSQEEEYVVVK
VQQLARKGEETSKFFKLKLKGNLGDRPLNHFWDLHIQRQNTSLVIQYANDIGSLFLNNRRQFISKDKRTFNNRDNYRKSS
YSQGFSHKSDNYVTSSIPIRKEPLPKPIKRNQNSSEQGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41116; Mature: 41116

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSINEFSGIDMAQEQDQETNNTNTLAVTDTKPLNFAKSNYEEETTTNTLTHNITTVRQH
CCCCCHHCCCCCHHHHHHCCCCCCEEEEECCCCCCHHHCCCCCHHCCCHHEECEEEHHCC
PIAPPSEPQQYRAIGLVRGRYQPSTEQFTRGSLRTPDDSEIDAVLLGRVMSLLKNHLDLE
CCCCCCCCHHHHHEEEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
SDHLWVVYPRTRQENNDLHIQIMGVWEPETLGTKAKFSTELTNEEQQQTTSSLSISPTVE
CCCEEEEEECCCCCCCCEEEEEEEEECCHHCCCCCEECHHHCCHHHHHHHHCEEECCCCC
DNQSQEIPEVSENIDNSQPSTVFPSPETEIDDLVTLGDGYFSIRGEVIYQSQEEEYVVVK
CCCCCCCCHHHHHCCCCCCCEECCCCCCCHHHEEEECCCEEEEEEEEEEECCCCCEEEEE
VQQLARKGEETSKFFKLKLKGNLGDRPLNHFWDLHIQRQNTSLVIQYANDIGSLFLNNRR
HHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEEHHHHHHHHHHCHH
QFISKDKRTFNNRDNYRKSSYSQGFSHKSDNYVTSSIPIRKEPLPKPIKRNQNSSEQGN
HHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure
MKSINEFSGIDMAQEQDQETNNTNTLAVTDTKPLNFAKSNYEEETTTNTLTHNITTVRQH
CCCCCHHCCCCCHHHHHHCCCCCCEEEEECCCCCCHHHCCCCCHHCCCHHEECEEEHHCC
PIAPPSEPQQYRAIGLVRGRYQPSTEQFTRGSLRTPDDSEIDAVLLGRVMSLLKNHLDLE
CCCCCCCCHHHHHEEEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
SDHLWVVYPRTRQENNDLHIQIMGVWEPETLGTKAKFSTELTNEEQQQTTSSLSISPTVE
CCCEEEEEECCCCCCCCEEEEEEEEECCHHCCCCCEECHHHCCHHHHHHHHCEEECCCCC
DNQSQEIPEVSENIDNSQPSTVFPSPETEIDDLVTLGDGYFSIRGEVIYQSQEEEYVVVK
CCCCCCCCHHHHHCCCCCCCEECCCCCCCHHHEEEECCCEEEEEEEEEEECCCCCEEEEE
VQQLARKGEETSKFFKLKLKGNLGDRPLNHFWDLHIQRQNTSLVIQYANDIGSLFLNNRR
HHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEEHHHHHHHHHHCHH
QFISKDKRTFNNRDNYRKSSYSQGFSHKSDNYVTSSIPIRKEPLPKPIKRNQNSSEQGN
HHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA