| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475911
Identifier: 113475911
GI number: 113475911
Start: 3536404
End: 3536574
Strand: Reverse
Name: 113475911
Synonym: Tery_2271
Alternate gene names: NA
Gene position: 3536574-3536404 (Counterclockwise)
Preceding gene: 113475912
Following gene: 113475910
Centisome position: 45.63
GC content: 29.82
Gene sequence:
>171_bases TTGAATGCGATTGTTTATCAAGTTCATGAAGTAACTAAAAATGCTGGTTTTGCCAGAATAATTACAGAAATGGAAACGGA GACAGGGGCAAAGTTTTTATCTAAAAAACATGCTTATATTCATACTCCAACTCCAGAAAATCTCAATATATTGACTAAAG AATTAAATTAA
Upstream 100 bases:
>100_bases TTTTTTTGTTATTCCTGCTTATAAACCAGAAGGGAAAAAAGATTGTGATTTAGGGTGGATTTTTACTATCGAATTACACC TAAAGTTCCGCTATGAGGTT
Downstream 100 bases:
>100_bases TTTACAGCATTTTTTTAGTTAATGAGTTACAAAGTTTGATAGGTTGAGAGAACCTGGGAAAAAGATTAGTAATAAACTCT ACTTACTATCTTAAAAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 56; Mature: 56
Protein sequence:
>56_residues MNAIVYQVHEVTKNAGFARIITEMETETGAKFLSKKHAYIHTPTPENLNILTKELN
Sequences:
>Translated_56_residues MNAIVYQVHEVTKNAGFARIITEMETETGAKFLSKKHAYIHTPTPENLNILTKELN >Mature_56_residues MNAIVYQVHEVTKNAGFARIITEMETETGAKFLSKKHAYIHTPTPENLNILTKELN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6357; Mature: 6357
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAIVYQVHEVTKNAGFARIITEMETETGAKFLSKKHAYIHTPTPENLNILTKELN CCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCEEECCCCCCCEEEEEECC >Mature Secondary Structure MNAIVYQVHEVTKNAGFARIITEMETETGAKFLSKKHAYIHTPTPENLNILTKELN CCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA