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The map label for this gene is yfgC [H]

Identifier: 113475891

GI number: 113475891

Start: 3498817

End: 3499671

Strand: Reverse

Name: yfgC [H]

Synonym: Tery_2250

Alternate gene names: 113475891

Gene position: 3499671-3498817 (Counterclockwise)

Preceding gene: 113475893

Following gene: 113475885

Centisome position: 45.16

GC content: 36.96

Gene sequence:

>855_bases
ATGTTGAAAAAACTATCTTTGATTTCTCAGTCCTCCTATCGTAGAATATTATACCCATTAATATCTGTGATAGTCGCTGT
TAGTTTATGGACAGGTACAGTACTTCCCAGCCAAGCTATTCCCTGGAGAGAATTAATTTTTCGCAGTATTCAAATGATCT
CAATTTCTAACCTGTCTAAAACTCAAGAAGTTGAACTAGGTAAACAAATTAATCAACAGTTATTGGAAAGTGGAAATATT
AAACTTTATCGCGATCGCGCAGCTAAGAAATATATTGATAGAATTGGGCAAAGATTAGTTTTAGCAAGTCCCCGCTCAGA
TATTCCCTATACTTTTCAGGTAGTAGAGGATGATAGTATAAATGCTTTTGCTACTATGGGAGGCTTTGTTTACATCAATA
CTGGTTTAATGAAAGCTGCCGATAATGAAGCAGAATTAGCTAGTGTTATTGCTCATGAAATTGCTCATATTGCCGATCGC
CATGCACTAAAACAATTACGTCAAACATTATTAGCACAAGGTTTAGCGACTGCAGCAGGTGTAGATAATAGTGTTGCAGT
TCAAATAGCGGTAGAATTAGCATTACGTCGCCCCAAAAGCCGCCAGGCAGAATTTGAAGCTGATCAAATTGGAATTGAAA
CATTAGGAAAAGCAGGATATGCTCAATATGCTGCAATTACATTTATGCAAAAATTGTTGAAAAAATCTTCGCCGCCATCT
TTTCTTAGCACTCACCCAGCAACATCGACGCGAATTTCTCAGATGAAACAAATGATTAATCCTGAATTTGCCTATAATGG
TGATGGGTTAGATGATAGACGTTATCAGGTAATTTTAAATAGGTTGCTGCCCTAG

Upstream 100 bases:

>100_bases
ACTTTTGTAGTTAATAACAAGATTAGCAAAACATAGTTTGCGAATTTATGATATCTTGATAGACCCAAAATCTAGTACCT
CTAAATAAAAAAAATTCATC

Downstream 100 bases:

>100_bases
CAGACTAACACAGCTAAAATGGTGCGTGAGAGAAATACAGCTTAAATTTAAGCCGTAAATACGCACCCTACCTGACTAAA
TATTGTTTTCTATCTCCCTA

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MLKKLSLISQSSYRRILYPLISVIVAVSLWTGTVLPSQAIPWRELIFRSIQMISISNLSKTQEVELGKQINQQLLESGNI
KLYRDRAAKKYIDRIGQRLVLASPRSDIPYTFQVVEDDSINAFATMGGFVYINTGLMKAADNEAELASVIAHEIAHIADR
HALKQLRQTLLAQGLATAAGVDNSVAVQIAVELALRRPKSRQAEFEADQIGIETLGKAGYAQYAAITFMQKLLKKSSPPS
FLSTHPATSTRISQMKQMINPEFAYNGDGLDDRRYQVILNRLLP

Sequences:

>Translated_284_residues
MLKKLSLISQSSYRRILYPLISVIVAVSLWTGTVLPSQAIPWRELIFRSIQMISISNLSKTQEVELGKQINQQLLESGNI
KLYRDRAAKKYIDRIGQRLVLASPRSDIPYTFQVVEDDSINAFATMGGFVYINTGLMKAADNEAELASVIAHEIAHIADR
HALKQLRQTLLAQGLATAAGVDNSVAVQIAVELALRRPKSRQAEFEADQIGIETLGKAGYAQYAAITFMQKLLKKSSPPS
FLSTHPATSTRISQMKQMINPEFAYNGDGLDDRRYQVILNRLLP
>Mature_284_residues
MLKKLSLISQSSYRRILYPLISVIVAVSLWTGTVLPSQAIPWRELIFRSIQMISISNLSKTQEVELGKQINQQLLESGNI
KLYRDRAAKKYIDRIGQRLVLASPRSDIPYTFQVVEDDSINAFATMGGFVYINTGLMKAADNEAELASVIAHEIAHIADR
HALKQLRQTLLAQGLATAAGVDNSVAVQIAVELALRRPKSRQAEFEADQIGIETLGKAGYAQYAAITFMQKLLKKSSPPS
FLSTHPATSTRISQMKQMINPEFAYNGDGLDDRRYQVILNRLLP

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=266, Percent_Identity=31.5789473684211, Blast_Score=111, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6322940, Length=166, Percent_Identity=31.9277108433735, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 31618; Mature: 31618

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKLSLISQSSYRRILYPLISVIVAVSLWTGTVLPSQAIPWRELIFRSIQMISISNLSK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCH
TQEVELGKQINQQLLESGNIKLYRDRAAKKYIDRIGQRLVLASPRSDIPYTFQVVEDDSI
HHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEECCCC
NAFATMGGFVYINTGLMKAADNEAELASVIAHEIAHIADRHALKQLRQTLLAQGLATAAG
CHHHHHCCEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VDNSVAVQIAVELALRRPKSRQAEFEADQIGIETLGKAGYAQYAAITFMQKLLKKSSPPS
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
FLSTHPATSTRISQMKQMINPEFAYNGDGLDDRRYQVILNRLLP
HHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLKKLSLISQSSYRRILYPLISVIVAVSLWTGTVLPSQAIPWRELIFRSIQMISISNLSK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCH
TQEVELGKQINQQLLESGNIKLYRDRAAKKYIDRIGQRLVLASPRSDIPYTFQVVEDDSI
HHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEECCCC
NAFATMGGFVYINTGLMKAADNEAELASVIAHEIAHIADRHALKQLRQTLLAQGLATAAG
CHHHHHCCEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VDNSVAVQIAVELALRRPKSRQAEFEADQIGIETLGKAGYAQYAAITFMQKLLKKSSPPS
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
FLSTHPATSTRISQMKQMINPEFAYNGDGLDDRRYQVILNRLLP
HHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]