| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475885
Identifier: 113475885
GI number: 113475885
Start: 3489738
End: 3490052
Strand: Reverse
Name: 113475885
Synonym: Tery_2244
Alternate gene names: NA
Gene position: 3490052-3489738 (Counterclockwise)
Preceding gene: 113475891
Following gene: 113475883
Centisome position: 45.03
GC content: 36.51
Gene sequence:
>315_bases ATGCTTAAACCTAACTCTATTTCTACAAACACTTCTAATAAAGTACATACTTTTCACCATAGAGATTTAGAAGAATATAG TACACTAGAACTAGCCCAAGCATTAGCTGCAAGACTTGCAATACCAGAAAGAGACTGGCATAAACTCAAATCTAATCGCC AGGTTCGTGCATTAGAGCTAACTATAGCTGCCTTAGTTTTTATGATTAAGGGTAAAACTACTGAAGCGATCACACGGCTA CAGCAAGCAACTAAATGGTTAAATCAATCTATATCAGCACCTCCGTGTCCAAGTCATGGTTCTCATAAAAAATAA
Upstream 100 bases:
>100_bases AAAATTCATCATTTAATTTTTTCGGAGAATCTTCTGGAGAAGAGTTCATACTGTCATACTTAATATAGTAAGTTTACTGA AAAACATTATCTAGATAGAT
Downstream 100 bases:
>100_bases ATTACTTTAACTTTAACTTAAATTAATTATTCATCCTACCAGGGGCAATCTAGAGTTATTCTTTACTTTTTTACATAGCA TTAACTCTGTGCCCTTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MLKPNSISTNTSNKVHTFHHRDLEEYSTLELAQALAARLAIPERDWHKLKSNRQVRALELTIAALVFMIKGKTTEAITRL QQATKWLNQSISAPPCPSHGSHKK
Sequences:
>Translated_104_residues MLKPNSISTNTSNKVHTFHHRDLEEYSTLELAQALAARLAIPERDWHKLKSNRQVRALELTIAALVFMIKGKTTEAITRL QQATKWLNQSISAPPCPSHGSHKK >Mature_104_residues MLKPNSISTNTSNKVHTFHHRDLEEYSTLELAQALAARLAIPERDWHKLKSNRQVRALELTIAALVFMIKGKTTEAITRL QQATKWLNQSISAPPCPSHGSHKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11753; Mature: 11753
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKPNSISTNTSNKVHTFHHRDLEEYSTLELAQALAARLAIPERDWHKLKSNRQVRALEL CCCCCCCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHH TIAALVFMIKGKTTEAITRLQQATKWLNQSISAPPCPSHGSHKK HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MLKPNSISTNTSNKVHTFHHRDLEEYSTLELAQALAARLAIPERDWHKLKSNRQVRALEL CCCCCCCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHH TIAALVFMIKGKTTEAITRLQQATKWLNQSISAPPCPSHGSHKK HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA