The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475881

Identifier: 113475881

GI number: 113475881

Start: 3486880

End: 3487341

Strand: Reverse

Name: 113475881

Synonym: Tery_2240

Alternate gene names: NA

Gene position: 3487341-3486880 (Counterclockwise)

Preceding gene: 113475883

Following gene: 113475880

Centisome position: 45.0

GC content: 38.53

Gene sequence:

>462_bases
ATGACCAACAAAATTGTATCAGAGGTTATGAGTTCTAATCCCATCACCGTCAAACCGAAAACGCCTTTGAAAGAAGCAAT
TAAGATCTTGGCAGAAAAACACATTAGTGGTCTTCCTGTAGTCGATGACAACGGAAAGTTAGTTGGTATAGTATCAGAAA
CAGATTTAATGTGGCAAGAGAGTGGAGTTACCCCTCCACCTTATATTATGCTGCTAGATAGTATTATCTTCTTAGAAAAT
CCAGGGCGTTATGAAAAAGAAATTCATAAAGCTTTAGGAGAAACTGTTGAGGAGATAATGACTAAAAATCCTTTGACTAC
TAGATCACAAGAACGACTTTCGGCAACAGCTAAACTTATGAACGAGCGTAGTATTCATCGTTTGCCAGTGGTAGATGAAA
ATGGCAAAGTTATTGGTATACTAACCCGTGGTGACATCATTAGAGCTATGGCAGCTGAGTGA

Upstream 100 bases:

>100_bases
TGACCTTAATAGAAGCAAAAAGCAAAAGTCAAAATCAAAATTTTGATCATATAACTATAATCATTGCTCAATTATTCAGA
AAAAAAAATCAGAGGTAAGT

Downstream 100 bases:

>100_bases
GGTGTAATTTGATGGTAAAAAATCAACAGCTGAAGTTTATGCTTTTGAGATCAACTCCGTTGGGATAATATTGGGATGAA
AACTTATGCATGAATACAAA

Product: signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MTNKIVSEVMSSNPITVKPKTPLKEAIKILAEKHISGLPVVDDNGKLVGIVSETDLMWQESGVTPPPYIMLLDSIIFLEN
PGRYEKEIHKALGETVEEIMTKNPLTTRSQERLSATAKLMNERSIHRLPVVDENGKVIGILTRGDIIRAMAAE

Sequences:

>Translated_153_residues
MTNKIVSEVMSSNPITVKPKTPLKEAIKILAEKHISGLPVVDDNGKLVGIVSETDLMWQESGVTPPPYIMLLDSIIFLEN
PGRYEKEIHKALGETVEEIMTKNPLTTRSQERLSATAKLMNERSIHRLPVVDENGKVIGILTRGDIIRAMAAE
>Mature_152_residues
TNKIVSEVMSSNPITVKPKTPLKEAIKILAEKHISGLPVVDDNGKLVGIVSETDLMWQESGVTPPPYIMLLDSIIFLENP
GRYEKEIHKALGETVEEIMTKNPLTTRSQERLSATAKLMNERSIHRLPVVDENGKVIGILTRGDIIRAMAAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 16942; Mature: 16811

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKIVSEVMSSNPITVKPKTPLKEAIKILAEKHISGLPVVDDNGKLVGIVSETDLMWQE
CCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCEECC
SGVTPPPYIMLLDSIIFLENPGRYEKEIHKALGETVEEIMTKNPLTTRSQERLSATAKLM
CCCCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
NERSIHRLPVVDENGKVIGILTRGDIIRAMAAE
HCCCCCCCCEECCCCCEEEEEECCHHHHHHCCC
>Mature Secondary Structure 
TNKIVSEVMSSNPITVKPKTPLKEAIKILAEKHISGLPVVDDNGKLVGIVSETDLMWQE
CHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCEECC
SGVTPPPYIMLLDSIIFLENPGRYEKEIHKALGETVEEIMTKNPLTTRSQERLSATAKLM
CCCCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
NERSIHRLPVVDENGKVIGILTRGDIIRAMAAE
HCCCCCCCCEECCCCCEEEEEECCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]