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The map label for this gene is 113475880

Identifier: 113475880

GI number: 113475880

Start: 3485910

End: 3486572

Strand: Reverse

Name: 113475880

Synonym: Tery_2239

Alternate gene names: NA

Gene position: 3486572-3485910 (Counterclockwise)

Preceding gene: 113475881

Following gene: 113475879

Centisome position: 44.99

GC content: 41.03

Gene sequence:

>663_bases
ATGAGTGTTAACCCAAATTCAGTTAAGCAACTACTGATATCCGAAGAACTAGGCGATCGCTTGCGAGGAGTTAATAAATT
ACGTCAAATAGAACCTGCGATCGCCTTTGAATTAATTCAAATTCCGATCAAGGATAAAAATACTCGTGTTAGGTACGCTG
CCGTCAGCCAAATGTCAAGCTTGGGAAAGCAAAACTTAACAATATCCCAAGAAATATTGTGTGAGCGTCTCTTCAAAGAT
AAAGAAGCAGATGTGCAAGCAGCAGCAGCAGATGCTATCGGAGCATTAAAAATAACTCAAGCTTTTGATGACCTAGTGCG
GGTATACCAAAATACTTCAGAATGGTTAGTAAAACTCAGTATAGTTGCGGCAATAGGAGAAATGGGAGAACCAAAAGCTT
TTTCTTTACTTGAGGATGCTCTCAATTCAGAGAATGAATTAATACAGACTATTGCCATTAGCGCTCTAGGGGAACTAGGA
AATTTAGAAGCCATTCCTTTACTCAAACCCTTTGCTGTCCACAGTGACTGGCAAATACGCTATAGAGTTTTACAGGCCTT
AGAGAGGTTAGGAACCCCAGAAGCAAAAGAGATAATAGCACAGTTGGCTGAGGATGAAGTTGAACAGGTTGCTCAGGAGG
CCAAGCTATCTCAGAGCAGGTAA

Upstream 100 bases:

>100_bases
TTATGTATAAGTGCTTTCCTACCCCCAAAAAGCTGTTCCTAGATTTGGATTTGATTTAGGAGCTAGGATATACGGACTAA
GTACAGAAAACAAATATAAA

Downstream 100 bases:

>100_bases
TATAGAAAAAAGGCAGGAGATTTTGGTCATGTCAGTTATGAGCTATCAGCTATAAGTACGGACCCCTGAAATATTTGCTA
TATTAATAGTTTTTTCTTTT

Product: HEAT repeat-containing PBS lyase

Products: NA

Alternate protein names: PBS Lyase HEAT Domain Protein Repeat-Containing Protein; Phycocyanin Alpha Phycocyanobilin Lyase Related Protein; PBS Lyase HEAT-Like Repeat Domain Protein; HEAT Repeat-Containing Protein; Phycocyanin Alpha Phycocyanobilin Lyase-Like Protein

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSVNPNSVKQLLISEELGDRLRGVNKLRQIEPAIAFELIQIPIKDKNTRVRYAAVSQMSSLGKQNLTISQEILCERLFKD
KEADVQAAAADAIGALKITQAFDDLVRVYQNTSEWLVKLSIVAAIGEMGEPKAFSLLEDALNSENELIQTIAISALGELG
NLEAIPLLKPFAVHSDWQIRYRVLQALERLGTPEAKEIIAQLAEDEVEQVAQEAKLSQSR

Sequences:

>Translated_220_residues
MSVNPNSVKQLLISEELGDRLRGVNKLRQIEPAIAFELIQIPIKDKNTRVRYAAVSQMSSLGKQNLTISQEILCERLFKD
KEADVQAAAADAIGALKITQAFDDLVRVYQNTSEWLVKLSIVAAIGEMGEPKAFSLLEDALNSENELIQTIAISALGELG
NLEAIPLLKPFAVHSDWQIRYRVLQALERLGTPEAKEIIAQLAEDEVEQVAQEAKLSQSR
>Mature_219_residues
SVNPNSVKQLLISEELGDRLRGVNKLRQIEPAIAFELIQIPIKDKNTRVRYAAVSQMSSLGKQNLTISQEILCERLFKDK
EADVQAAAADAIGALKITQAFDDLVRVYQNTSEWLVKLSIVAAIGEMGEPKAFSLLEDALNSENELIQTIAISALGELGN
LEAIPLLKPFAVHSDWQIRYRVLQALERLGTPEAKEIIAQLAEDEVEQVAQEAKLSQSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24363; Mature: 24232

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVNPNSVKQLLISEELGDRLRGVNKLRQIEPAIAFELIQIPIKDKNTRVRYAAVSQMSS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LGKQNLTISQEILCERLFKDKEADVQAAAADAIGALKITQAFDDLVRVYQNTSEWLVKLS
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
IVAAIGEMGEPKAFSLLEDALNSENELIQTIAISALGELGNLEAIPLLKPFAVHSDWQIR
HHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHH
YRVLQALERLGTPEAKEIIAQLAEDEVEQVAQEAKLSQSR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVNPNSVKQLLISEELGDRLRGVNKLRQIEPAIAFELIQIPIKDKNTRVRYAAVSQMSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LGKQNLTISQEILCERLFKDKEADVQAAAADAIGALKITQAFDDLVRVYQNTSEWLVKLS
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
IVAAIGEMGEPKAFSLLEDALNSENELIQTIAISALGELGNLEAIPLLKPFAVHSDWQIR
HHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHH
YRVLQALERLGTPEAKEIIAQLAEDEVEQVAQEAKLSQSR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA