| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113475875
Identifier: 113475875
GI number: 113475875
Start: 3481216
End: 3481473
Strand: Reverse
Name: 113475875
Synonym: Tery_2234
Alternate gene names: NA
Gene position: 3481473-3481216 (Counterclockwise)
Preceding gene: 113475876
Following gene: 113475874
Centisome position: 44.92
GC content: 27.13
Gene sequence:
>258_bases TTGCAAATGAAATTTACTGATAAGCAAAGAATCAAATTTCGTGAAGAGATTGAAAGGGTATTAAGTGAGGATAAACTGAC AAGTATATTTTCTGAATATCCAGAGAAATTTGGAGATAATTTTTATAATCAAATTCCAGGAGGTGACTATCGTACAAGGT TGATTAATTTAATCATTGAGCTCAATAATAGAGAACTTATTTTTGATTTTATTAAAGTTGTTAGGTATGAGTATCATAAT TTTGCTCAAGATTTATAA
Upstream 100 bases:
>100_bases ATAGAGAACTTATTTTTGATTTTATTAAAGTTGTTAGGTATGAGTATCATAATTTTGCTCAAGATTTATAAATAGTAGAT AAAATAGTAATGTAAGTACA
Downstream 100 bases:
>100_bases ATAGTAGATAAAATAGTAATGTAAGTACATTGCAAATGAAATTTACTGATAAGCAAAGAATCAAATTTCGTGAAGAGATT GAAAGGGTATTAAGTGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MQMKFTDKQRIKFREEIERVLSEDKLTSIFSEYPEKFGDNFYNQIPGGDYRTRLINLIIELNNRELIFDFIKVVRYEYHN FAQDL
Sequences:
>Translated_85_residues MQMKFTDKQRIKFREEIERVLSEDKLTSIFSEYPEKFGDNFYNQIPGGDYRTRLINLIIELNNRELIFDFIKVVRYEYHN FAQDL >Mature_85_residues MQMKFTDKQRIKFREEIERVLSEDKLTSIFSEYPEKFGDNFYNQIPGGDYRTRLINLIIELNNRELIFDFIKVVRYEYHN FAQDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10432; Mature: 10432
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMKFTDKQRIKFREEIERVLSEDKLTSIFSEYPEKFGDNFYNQIPGGDYRTRLINLIIE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHH LNNRELIFDFIKVVRYEYHNFAQDL CCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQMKFTDKQRIKFREEIERVLSEDKLTSIFSEYPEKFGDNFYNQIPGGDYRTRLINLIIE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHH LNNRELIFDFIKVVRYEYHNFAQDL CCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA