| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475870
Identifier: 113475870
GI number: 113475870
Start: 3477613
End: 3478758
Strand: Reverse
Name: 113475870
Synonym: Tery_2229
Alternate gene names: NA
Gene position: 3478758-3477613 (Counterclockwise)
Preceding gene: 113475871
Following gene: 113475869
Centisome position: 44.89
GC content: 38.31
Gene sequence:
>1146_bases GTGGTAAAAATTTATCCCCAAAATAATATGATGGAAAATCAACAAGCCTGGCTTTTTTTCTATGGTGATGGAAATACACA TAATGTTAATATTGCTGACCTTCCTGATCCTCCCCCTTGGCGAAAATTTCAAGAGATAGAAAAAGATTCTGAATTAAAAA AACAACTGGAAAAAGATTGGCAAAATATTCAAATTTTAGCTGAGTCTGATGATAATAAAAGGGGTAGAGAAAAGGGTGAA AAATTTCGTGTTTATTCCTCAGAAATAACTGAGGAAGATGATGGTCAAAAACCACTTGTTAATGTTGTTGATGCCGTAAA TGCTGCAATATATTTACGACGGCCTCTTTTGGTCACAGGAAACCCTGGTTCGGGTAAAACTTCCTTGGCTTATGCGATCG CACAGGAATTAAAATTAGGGCCCGTATTGAATTGGCCCATTACAGCTCGTTCTAATTTGGTCGATGGACTTTATCGTTAT GATGCGATCGCTCGGTTACAAGATTCTCAGTTAAATAGGGAGAACTTACAAAATATTGGCCAATATGTCACTTTGGGCCC GGTAGGAACAGCTTTTTTACCTTCTTTATATCCGAGAGTATTATTAATTGATGAGATAGATAAAAGTGATATTAATTTGC CGAATGATTTGCTTCACTTATTTGAGGAGGGAAGGTTTGAAATTCCTGAGTTGGTCCGTTGGGCTGATAGGTCTGAAAAA AGTTCTGAAAATGATCAACCAACAAAAGTAAAAGTGCGGACGGAAGATGCGGGTATCAAAGCTTCTATTATAGGGGGAAG AGTTCATTGTTCTAGTTTTCCTATTGTAATTATGACTAGTAATGGGGAACGGGACTTTCCTCCGGCTTTTGTGCGCCGCT GTCTCCGAATAAGAATGCCAGACCCGGGTGCGGCAGCTCTTCAAACTATTATTAAGGCTCATTTTCAGGATGAGGAACAA GGTGAAAGTTTGAAGACAACAACTGAGGAACTTATTGAAGCTTTTTTGGAAAAGGACGAACAGGAACGGGCAACGGATCA GTTATTGAATGCTATTTATATTCGCAATAACCTTAGTCCAGAAGCTTTTACTGATGACTTACAAGCTTTATTATTGAAGG GTTTATCAACTACGGATGAATTTTGA
Upstream 100 bases:
>100_bases AGAATTTTATGTGATTGTAATGACCGCAAACCAATCAACATTCCTGCTTTTAATCAATTTTAATCAACTAAATAATTAGT TCTTAAAAAAGGAGAAAGCA
Downstream 100 bases:
>100_bases TAACAATGTCAATAGTAATGTAGGTTGGGCAGAACGACACTGAAGTCAAACATCAGGATAATTTTGGTAATGTTGAGTGT ATTTTATTGATATAATTTAG
Product: ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; ATPase Central Domain-Containing Protein; AAA ATPase; MoxR-Like ATPase; ATPase AAA Family Protein; AAA Family ATPase; ATPase-Like Protein; AAA_5 ATPase; ATPase Associated With Various Cellular Activities; AAA ATPase Central RegionATPase; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; ClpA/ClpB Family Protein; ATPase Aaa Family; AAA ATPase Family Protein; ATPase Protein
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MVKIYPQNNMMENQQAWLFFYGDGNTHNVNIADLPDPPPWRKFQEIEKDSELKKQLEKDWQNIQILAESDDNKRGREKGE KFRVYSSEITEEDDGQKPLVNVVDAVNAAIYLRRPLLVTGNPGSGKTSLAYAIAQELKLGPVLNWPITARSNLVDGLYRY DAIARLQDSQLNRENLQNIGQYVTLGPVGTAFLPSLYPRVLLIDEIDKSDINLPNDLLHLFEEGRFEIPELVRWADRSEK SSENDQPTKVKVRTEDAGIKASIIGGRVHCSSFPIVIMTSNGERDFPPAFVRRCLRIRMPDPGAAALQTIIKAHFQDEEQ GESLKTTTEELIEAFLEKDEQERATDQLLNAIYIRNNLSPEAFTDDLQALLLKGLSTTDEF
Sequences:
>Translated_381_residues MVKIYPQNNMMENQQAWLFFYGDGNTHNVNIADLPDPPPWRKFQEIEKDSELKKQLEKDWQNIQILAESDDNKRGREKGE KFRVYSSEITEEDDGQKPLVNVVDAVNAAIYLRRPLLVTGNPGSGKTSLAYAIAQELKLGPVLNWPITARSNLVDGLYRY DAIARLQDSQLNRENLQNIGQYVTLGPVGTAFLPSLYPRVLLIDEIDKSDINLPNDLLHLFEEGRFEIPELVRWADRSEK SSENDQPTKVKVRTEDAGIKASIIGGRVHCSSFPIVIMTSNGERDFPPAFVRRCLRIRMPDPGAAALQTIIKAHFQDEEQ GESLKTTTEELIEAFLEKDEQERATDQLLNAIYIRNNLSPEAFTDDLQALLLKGLSTTDEF >Mature_381_residues MVKIYPQNNMMENQQAWLFFYGDGNTHNVNIADLPDPPPWRKFQEIEKDSELKKQLEKDWQNIQILAESDDNKRGREKGE KFRVYSSEITEEDDGQKPLVNVVDAVNAAIYLRRPLLVTGNPGSGKTSLAYAIAQELKLGPVLNWPITARSNLVDGLYRY DAIARLQDSQLNRENLQNIGQYVTLGPVGTAFLPSLYPRVLLIDEIDKSDINLPNDLLHLFEEGRFEIPELVRWADRSEK SSENDQPTKVKVRTEDAGIKASIIGGRVHCSSFPIVIMTSNGERDFPPAFVRRCLRIRMPDPGAAALQTIIKAHFQDEEQ GESLKTTTEELIEAFLEKDEQERATDQLLNAIYIRNNLSPEAFTDDLQALLLKGLSTTDEF
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43216; Mature: 43216
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKIYPQNNMMENQQAWLFFYGDGNTHNVNIADLPDPPPWRKFQEIEKDSELKKQLEKDW CEEECCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC QNIQILAESDDNKRGREKGEKFRVYSSEITEEDDGQKPLVNVVDAVNAAIYLRRPLLVTG CCEEEEEECCCCCCHHHCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHEEEECCEEEEC NPGSGKTSLAYAIAQELKLGPVLNWPITARSNLVDGLYRYDAIARLQDSQLNRENLQNIG CCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH QYVTLGPVGTAFLPSLYPRVLLIDEIDKSDINLPNDLLHLFEEGRFEIPELVRWADRSEK CEEEECCCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCC SSENDQPTKVKVRTEDAGIKASIIGGRVHCSSFPIVIMTSNGERDFPPAFVRRCLRIRMP CCCCCCCCEEEEEECCCCEEEEEECCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCC DPGAAALQTIIKAHFQDEEQGESLKTTTEELIEAFLEKDEQERATDQLLNAIYIRNNLSP CCCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH EAFTDDLQALLLKGLSTTDEF HHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVKIYPQNNMMENQQAWLFFYGDGNTHNVNIADLPDPPPWRKFQEIEKDSELKKQLEKDW CEEECCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC QNIQILAESDDNKRGREKGEKFRVYSSEITEEDDGQKPLVNVVDAVNAAIYLRRPLLVTG CCEEEEEECCCCCCHHHCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHEEEECCEEEEC NPGSGKTSLAYAIAQELKLGPVLNWPITARSNLVDGLYRYDAIARLQDSQLNRENLQNIG CCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH QYVTLGPVGTAFLPSLYPRVLLIDEIDKSDINLPNDLLHLFEEGRFEIPELVRWADRSEK CEEEECCCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCC SSENDQPTKVKVRTEDAGIKASIIGGRVHCSSFPIVIMTSNGERDFPPAFVRRCLRIRMP CCCCCCCCEEEEEECCCCEEEEEECCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCC DPGAAALQTIIKAHFQDEEQGESLKTTTEELIEAFLEKDEQERATDQLLNAIYIRNNLSP CCCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH EAFTDDLQALLLKGLSTTDEF HHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA