| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475837
Identifier: 113475837
GI number: 113475837
Start: 3422919
End: 3424724
Strand: Reverse
Name: 113475837
Synonym: Tery_2196
Alternate gene names: NA
Gene position: 3424724-3422919 (Counterclockwise)
Preceding gene: 113475839
Following gene: 113475836
Centisome position: 44.19
GC content: 41.25
Gene sequence:
>1806_bases ATGAAAAAATTTCTGTTTGTCTGCTTATTCTTAATTGGGCTTGGTTGGGCCTTATCTAACTTCTCTGGTTTGGCCAATAA AGGAGTCTACGACTCAATTGTCTTAGACTTCCGTGAAGATATCGGAATTACTAAAATTTTCGATCAAATCAGGACAATTT CTGATGAGTACCAAGTCGCACCTCGCCTAAATAGTGAATTTTCAATATCAGATAATGTATATATTGTCAAGGGTAATCGC CAACTCCTCAAAAACCTCAAAAGTTCTCTAGGCAAATATACTGAATACATAGAACCAAACTATATTTACAATACCGATGC CATTATCTTGGATAGTGGTGATGGCGTTCCTAACGATCCCATGTATGGGAAACAATGGAACCTGCGTAGCATCAATGTCG AATCTGCCTGGAATGAAACCCAAGGCGACGGAATAACTGTAGCAGTAATTGATACAGGTGTTTCCAAAGTTCCCGACCTG GAAAAAACAAAATTTGTACCCGGGTACGATTTTGTTAATGATCGCACATTAGCTACTGATGACAACGGTCATGGTACTCA TGTTGCAGGCACTATTGCCCAAGCTACTAACAATAATTATGGTGTAGCAGGTATCGCCTACGAAGCTAGCATCATGCCCC TAAAAGTCTTATCTGCTAGTGGAGGTGGTACAGTTTCCGATATTGCCGAGTCTATAAAATTCGCTGCTGATAATGGTGCA GACATTATTAATATGAGTCTAGGTGGTGGCGGTGAAAGCCAAATCATGAAAGAAGCAATTAATTATGCTCATAATAAAGG TGTAGTTATCATTGCTGCAGTAGGCAACGCTAACCAAAATTCAGCCAGCTACCCCGCTCGTTATCCTCATGTTATTGGTG TCTCCGCCACTGACGCTTCTGGAGAAAAAGCTCCATACTCCAATTTCGGTGCAGGGGTTGATATTTCTGCTCCTGGCGGT TCCACTAAAGATAAAAATGAAGCTGGCGGTATCCTGCAAGAAACCATTAACCCAGAAAATGGCAACAGTGTATTTGCCTC CTTCCAAGGAACAAGTATGGCATCTCCCCACGTTGCAGGAGTGGTAGCATTAATCAAATCTAGTGGAATTCAAGACCCAG AGGAAATTACCAACATTCTCAAAAAATCTGCTAGAACTGTTAAAGAAGACCCCCTCAACCATTTTGGTGCAGGTCAGTTA GATGCAGCAGCAGCAGTCAAATTGGCACTTAAAGGTCAAATAACTTTCCGCGACTTCTTCCGGTGGTTATATGATAATGG TTATCTCAATCCTGGTTTTTGGCTTGATGGTGGCGCCATAGCATTGTTGCCTAAGTTAGGAATGGTTTTAGGATCTTATA TATTAGCTTGGTTGCTGCGGAATTATTTTCCTTTCAGTTGGAGTTTTCCCTTACATACTGGATTAGTTGTAGGTAGCAGT GGGTTATTTTTCTTGCGTGGTTTCTATGTTTTTGATTTGCCCCAATGGCCAATGCGTTTAATGGGTAGTTCTTTACCCGA ACTTGGTGGAGCTATTCAAGGTAGTGGTATTTTGAATCCCATTTTTGCTAGTGTATTGATTCCAGCGTTATTAATTCTGT TGTTATTAGGTCATCAGCAATGGAAGTGGGTAGCGATCGGTACTACTATCGGTGTTGCTAGCTGTTTAATTGTGAGTGCA GTTGTCGATCCTGCAGTTTGGGGATTAGGTACTGGTATAACAGCTCAAATTTTCCTAGTTGTGAATGCCCTGTTATGCTT AGGTTTAGCACGTTTGGCAATTAGAACAGAGGAAAAGTTAGCATGA
Upstream 100 bases:
>100_bases GCCCCAGGGAATTAGGCAACACCACATTTTTATCCAAGACACCAAACAATAAGCTATCGTAGTAAAAAAGTCCTCAGTAT ATTAGTAGATATCTTAAGCA
Downstream 100 bases:
>100_bases ATATCACAGTGAGTGGTTCGGTAGAAAAACAAGGATTTGGTACTGGTACTTGGGCGTTAGTGACTGATGGTGAAACTTAT GAATTAAAGGATGCTCCTAC
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 601; Mature: 601
Protein sequence:
>601_residues MKKFLFVCLFLIGLGWALSNFSGLANKGVYDSIVLDFREDIGITKIFDQIRTISDEYQVAPRLNSEFSISDNVYIVKGNR QLLKNLKSSLGKYTEYIEPNYIYNTDAIILDSGDGVPNDPMYGKQWNLRSINVESAWNETQGDGITVAVIDTGVSKVPDL EKTKFVPGYDFVNDRTLATDDNGHGTHVAGTIAQATNNNYGVAGIAYEASIMPLKVLSASGGGTVSDIAESIKFAADNGA DIINMSLGGGGESQIMKEAINYAHNKGVVIIAAVGNANQNSASYPARYPHVIGVSATDASGEKAPYSNFGAGVDISAPGG STKDKNEAGGILQETINPENGNSVFASFQGTSMASPHVAGVVALIKSSGIQDPEEITNILKKSARTVKEDPLNHFGAGQL DAAAAVKLALKGQITFRDFFRWLYDNGYLNPGFWLDGGAIALLPKLGMVLGSYILAWLLRNYFPFSWSFPLHTGLVVGSS GLFFLRGFYVFDLPQWPMRLMGSSLPELGGAIQGSGILNPIFASVLIPALLILLLLGHQQWKWVAIGTTIGVASCLIVSA VVDPAVWGLGTGITAQIFLVVNALLCLGLARLAIRTEEKLA
Sequences:
>Translated_601_residues MKKFLFVCLFLIGLGWALSNFSGLANKGVYDSIVLDFREDIGITKIFDQIRTISDEYQVAPRLNSEFSISDNVYIVKGNR QLLKNLKSSLGKYTEYIEPNYIYNTDAIILDSGDGVPNDPMYGKQWNLRSINVESAWNETQGDGITVAVIDTGVSKVPDL EKTKFVPGYDFVNDRTLATDDNGHGTHVAGTIAQATNNNYGVAGIAYEASIMPLKVLSASGGGTVSDIAESIKFAADNGA DIINMSLGGGGESQIMKEAINYAHNKGVVIIAAVGNANQNSASYPARYPHVIGVSATDASGEKAPYSNFGAGVDISAPGG STKDKNEAGGILQETINPENGNSVFASFQGTSMASPHVAGVVALIKSSGIQDPEEITNILKKSARTVKEDPLNHFGAGQL DAAAAVKLALKGQITFRDFFRWLYDNGYLNPGFWLDGGAIALLPKLGMVLGSYILAWLLRNYFPFSWSFPLHTGLVVGSS GLFFLRGFYVFDLPQWPMRLMGSSLPELGGAIQGSGILNPIFASVLIPALLILLLLGHQQWKWVAIGTTIGVASCLIVSA VVDPAVWGLGTGITAQIFLVVNALLCLGLARLAIRTEEKLA >Mature_601_residues MKKFLFVCLFLIGLGWALSNFSGLANKGVYDSIVLDFREDIGITKIFDQIRTISDEYQVAPRLNSEFSISDNVYIVKGNR QLLKNLKSSLGKYTEYIEPNYIYNTDAIILDSGDGVPNDPMYGKQWNLRSINVESAWNETQGDGITVAVIDTGVSKVPDL EKTKFVPGYDFVNDRTLATDDNGHGTHVAGTIAQATNNNYGVAGIAYEASIMPLKVLSASGGGTVSDIAESIKFAADNGA DIINMSLGGGGESQIMKEAINYAHNKGVVIIAAVGNANQNSASYPARYPHVIGVSATDASGEKAPYSNFGAGVDISAPGG STKDKNEAGGILQETINPENGNSVFASFQGTSMASPHVAGVVALIKSSGIQDPEEITNILKKSARTVKEDPLNHFGAGQL DAAAAVKLALKGQITFRDFFRWLYDNGYLNPGFWLDGGAIALLPKLGMVLGSYILAWLLRNYFPFSWSFPLHTGLVVGSS GLFFLRGFYVFDLPQWPMRLMGSSLPELGGAIQGSGILNPIFASVLIPALLILLLLGHQQWKWVAIGTTIGVASCLIVSA VVDPAVWGLGTGITAQIFLVVNALLCLGLARLAIRTEEKLA
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI27894285, Length=349, Percent_Identity=26.0744985673352, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI20336186, Length=334, Percent_Identity=26.9461077844311, Blast_Score=73, Evalue=9e-13, Organism=Homo sapiens, GI20336190, Length=349, Percent_Identity=26.0744985673352, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI20336180, Length=349, Percent_Identity=26.0744985673352, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI20336188, Length=349, Percent_Identity=26.0744985673352, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI4505577, Length=311, Percent_Identity=26.0450160771704, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI20336184, Length=349, Percent_Identity=26.0744985673352, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI20336182, Length=311, Percent_Identity=26.0450160771704, Blast_Score=71, Evalue=4e-12, Organism=Homo sapiens, GI76443679, Length=344, Percent_Identity=26.453488372093, Blast_Score=71, Evalue=4e-12, Organism=Homo sapiens, GI4505579, Length=338, Percent_Identity=27.5147928994083, Blast_Score=70, Evalue=7e-12, Organism=Homo sapiens, GI20336244, Length=341, Percent_Identity=26.9794721407625, Blast_Score=67, Evalue=6e-11, Organism=Homo sapiens, GI31317307, Length=243, Percent_Identity=28.3950617283951, Blast_Score=66, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6320775, Length=259, Percent_Identity=36.6795366795367, Blast_Score=111, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6324576, Length=266, Percent_Identity=32.3308270676692, Blast_Score=96, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6319893, Length=251, Percent_Identity=31.0756972111554, Blast_Score=85, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6324091, Length=278, Percent_Identity=29.4964028776978, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 64249; Mature: 64249
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00138 SUBTILASE_SER ; PS00285 POTATO_INHIBITOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFLFVCLFLIGLGWALSNFSGLANKGVYDSIVLDFREDIGITKIFDQIRTISDEYQVA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCHHHHCC PRLNSEFSISDNVYIVKGNRQLLKNLKSSLGKYTEYIEPNYIYNTDAIILDSGDGVPNDP CCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCCCC MYGKQWNLRSINVESAWNETQGDGITVAVIDTGVSKVPDLEKTKFVPGYDFVNDRTLATD CCCCCCCCEEEEHHCCCCCCCCCCEEEEEEECCCCCCCCCHHCCCCCCCCCCCCCEEEEC DNGHGTHVAGTIAQATNNNYGVAGIAYEASIMPLKVLSASGGGTVSDIAESIKFAADNGA CCCCCCCCEEEEEHHCCCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCC DIINMSLGGGGESQIMKEAINYAHNKGVVIIAAVGNANQNSASYPARYPHVIGVSATDAS CEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCC GEKAPYSNFGAGVDISAPGGSTKDKNEAGGILQETINPENGNSVFASFQGTSMASPHVAG CCCCCCCCCCCCEEEECCCCCCCCCCHHCCHHHHCCCCCCCCEEEEEECCCCCCCCHHHH VVALIKSSGIQDPEEITNILKKSARTVKEDPLNHFGAGQLDAAAAVKLALKGQITFRDFF HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEHHCCCCHHHHHH RWLYDNGYLNPGFWLDGGAIALLPKLGMVLGSYILAWLLRNYFPFSWSFPLHTGLVVGSS HHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEECCC GLFFLRGFYVFDLPQWPMRLMGSSLPELGGAIQGSGILNPIFASVLIPALLILLLLGHQQ CCEEEECEEEEECCHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC WKWVAIGTTIGVASCLIVSAVVDPAVWGLGTGITAQIFLVVNALLCLGLARLAIRTEEKL EEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC A C >Mature Secondary Structure MKKFLFVCLFLIGLGWALSNFSGLANKGVYDSIVLDFREDIGITKIFDQIRTISDEYQVA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCHHHHCC PRLNSEFSISDNVYIVKGNRQLLKNLKSSLGKYTEYIEPNYIYNTDAIILDSGDGVPNDP CCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCCCC MYGKQWNLRSINVESAWNETQGDGITVAVIDTGVSKVPDLEKTKFVPGYDFVNDRTLATD CCCCCCCCEEEEHHCCCCCCCCCCEEEEEEECCCCCCCCCHHCCCCCCCCCCCCCEEEEC DNGHGTHVAGTIAQATNNNYGVAGIAYEASIMPLKVLSASGGGTVSDIAESIKFAADNGA CCCCCCCCEEEEEHHCCCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCC DIINMSLGGGGESQIMKEAINYAHNKGVVIIAAVGNANQNSASYPARYPHVIGVSATDAS CEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCC GEKAPYSNFGAGVDISAPGGSTKDKNEAGGILQETINPENGNSVFASFQGTSMASPHVAG CCCCCCCCCCCCEEEECCCCCCCCCCHHCCHHHHCCCCCCCCEEEEEECCCCCCCCHHHH VVALIKSSGIQDPEEITNILKKSARTVKEDPLNHFGAGQLDAAAAVKLALKGQITFRDFF HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEHHCCCCHHHHHH RWLYDNGYLNPGFWLDGGAIALLPKLGMVLGSYILAWLLRNYFPFSWSFPLHTGLVVGSS HHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEECCC GLFFLRGFYVFDLPQWPMRLMGSSLPELGGAIQGSGILNPIFASVLIPALLILLLLGHQQ CCEEEECEEEEECCHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC WKWVAIGTTIGVASCLIVSAVVDPAVWGLGTGITAQIFLVVNALLCLGLARLAIRTEEKL EEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2187155; 12024217 [H]