| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113475758
Identifier: 113475758
GI number: 113475758
Start: 3295678
End: 3296571
Strand: Reverse
Name: 113475758
Synonym: Tery_2110
Alternate gene names: NA
Gene position: 3296571-3295678 (Counterclockwise)
Preceding gene: 113475759
Following gene: 113475757
Centisome position: 42.54
GC content: 30.87
Gene sequence:
>894_bases ATGCTGCCAAATTATCAATCATTACCGAAAAACCGGATAGTAATAAAAAGCGAGCTACAGAATTCAACAATCTGGGATTT AATTAAGCCTAGAAATACTGATATTGTCATCTCCTCCTGTTATAAGTCAGGCACAACTTTAACTCAACAAATAGTTAATT TAATGGTTAATGGCCATGATGATTTTGAATCTCTCCATGATCTTAGTCCCTGGGTAGAAGAAATTTTTATTACTCCCCCA GAAAATAAAAAATCTTGGATAGAAAGTTTGTCTAGCCCCAGAATTTTAAAAAGTCATCTATTGTTTGAAGCTTTACCATG TTACCCAGAATGGAAATATATTTATTTAGTAAGAGATGGCAGAGATGTGGGATTATCTTTATATCATCATTATCAATCTT TCTTGCCTGAATATTTCCATGAAAATTTACCACAAGATTTTGCGGCTTTTTGGGATGATTTTGTAGAAACAAAAGAGGAT AAAAATCAGTATTGGTCTTATTGGAAACATATAAAAAGTTGGTGGCAGGTAAGAAATTTACCGAATGTACTTTTAGTCCA CTATCATAATTTAATCTATGATAAATCTCAAGAAATTGACAGAATTTCTGAATTTCTCAATCTAAATATCAATAGTTCAA AAAAAGAGATGGTCTTAGAAAAAAGTTCTCTAGAATATATGAAGTCAAATTGGCAAAAGTTTCAGCAAAAAGGAGTCTTT CAACCTAATACTTTTATTAATAAAGGAGTAAATGGTCGCTGGCACAATTTATTAACTACTGAACAGCTCAAAAGATATGA TATAATTATGTCTGAAGAGTTAGAAACAGAATGTGCTAAGTGGGTAAAAAATGCTGGATTTTTACCTGAAATTAATTCAA TAGCATTTGATTAG
Upstream 100 bases:
>100_bases AGACGATCTTGATTTTTTTAGCATTAAACTAATCTAATTATTTAGATAATTAATCTAAAAATCATAAAGCAACTAAACGG GAAAAATTTAGAAAATTATT
Downstream 100 bases:
>100_bases GTTACCTAATTGTGAACAACTTATATTCATTACCATTTGTCTCAGACATTTCCACCAACTATAAATCTCTAGGAAAATCA ATGAGCCTTTAAAAAAAGTA
Product: sulfotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MLPNYQSLPKNRIVIKSELQNSTIWDLIKPRNTDIVISSCYKSGTTLTQQIVNLMVNGHDDFESLHDLSPWVEEIFITPP ENKKSWIESLSSPRILKSHLLFEALPCYPEWKYIYLVRDGRDVGLSLYHHYQSFLPEYFHENLPQDFAAFWDDFVETKED KNQYWSYWKHIKSWWQVRNLPNVLLVHYHNLIYDKSQEIDRISEFLNLNINSSKKEMVLEKSSLEYMKSNWQKFQQKGVF QPNTFINKGVNGRWHNLLTTEQLKRYDIIMSEELETECAKWVKNAGFLPEINSIAFD
Sequences:
>Translated_297_residues MLPNYQSLPKNRIVIKSELQNSTIWDLIKPRNTDIVISSCYKSGTTLTQQIVNLMVNGHDDFESLHDLSPWVEEIFITPP ENKKSWIESLSSPRILKSHLLFEALPCYPEWKYIYLVRDGRDVGLSLYHHYQSFLPEYFHENLPQDFAAFWDDFVETKED KNQYWSYWKHIKSWWQVRNLPNVLLVHYHNLIYDKSQEIDRISEFLNLNINSSKKEMVLEKSSLEYMKSNWQKFQQKGVF QPNTFINKGVNGRWHNLLTTEQLKRYDIIMSEELETECAKWVKNAGFLPEINSIAFD >Mature_297_residues MLPNYQSLPKNRIVIKSELQNSTIWDLIKPRNTDIVISSCYKSGTTLTQQIVNLMVNGHDDFESLHDLSPWVEEIFITPP ENKKSWIESLSSPRILKSHLLFEALPCYPEWKYIYLVRDGRDVGLSLYHHYQSFLPEYFHENLPQDFAAFWDDFVETKED KNQYWSYWKHIKSWWQVRNLPNVLLVHYHNLIYDKSQEIDRISEFLNLNINSSKKEMVLEKSSLEYMKSNWQKFQQKGVF QPNTFINKGVNGRWHNLLTTEQLKRYDIIMSEELETECAKWVKNAGFLPEINSIAFD
Specific function: Involved in the synthesis of cell wall sulfolipids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfotransferase 1 family [H]
Homologues:
Organism=Homo sapiens, GI29550928, Length=261, Percent_Identity=29.5019157088123, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI29540539, Length=260, Percent_Identity=26.9230769230769, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI29540537, Length=260, Percent_Identity=26.9230769230769, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI29540535, Length=260, Percent_Identity=26.9230769230769, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI29540531, Length=260, Percent_Identity=26.9230769230769, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI4507305, Length=281, Percent_Identity=27.4021352313167, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI29550893, Length=261, Percent_Identity=25.6704980842912, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI4507303, Length=261, Percent_Identity=25.6704980842912, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI4885617, Length=273, Percent_Identity=27.4725274725275, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI28830308, Length=260, Percent_Identity=28.0769230769231, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI29550921, Length=257, Percent_Identity=26.4591439688716, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI10835035, Length=257, Percent_Identity=26.4591439688716, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI62868225, Length=257, Percent_Identity=26.4591439688716, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI62868223, Length=257, Percent_Identity=26.4591439688716, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI29540545, Length=261, Percent_Identity=28.3524904214559, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI56847626, Length=248, Percent_Identity=24.5967741935484, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI31563386, Length=254, Percent_Identity=28.740157480315, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI31563388, Length=251, Percent_Identity=28.2868525896414, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI7657633, Length=251, Percent_Identity=24.3027888446215, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI29029530, Length=290, Percent_Identity=23.448275862069, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI29540543, Length=170, Percent_Identity=24.7058823529412, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17566452, Length=291, Percent_Identity=27.1477663230241, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI221468277, Length=259, Percent_Identity=25.8687258687259, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24645281, Length=286, Percent_Identity=22.7272727272727, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI221468280, Length=273, Percent_Identity=28.9377289377289, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI22026942, Length=273, Percent_Identity=28.9377289377289, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24653521, Length=290, Percent_Identity=24.8275862068966, Blast_Score=71, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000863 [H]
Pfam domain/function: PF00685 Sulfotransfer_1 [H]
EC number: NA
Molecular weight: Translated: 35392; Mature: 35392
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPNYQSLPKNRIVIKSELQNSTIWDLIKPRNTDIVISSCYKSGTTLTQQIVNLMVNGHD CCCCCCCCCCCCEEEHHHCCCCHHHHHCCCCCCCEEEECHHCCCCHHHHHHHHHHHCCCH DFESLHDLSPWVEEIFITPPENKKSWIESLSSPRILKSHLLFEALPCYPEWKYIYLVRDG HHHHHHHHCHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECC RDVGLSLYHHYQSFLPEYFHENLPQDFAAFWDDFVETKEDKNQYWSYWKHIKSWWQVRNL CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PNVLLVHYHNLIYDKSQEIDRISEFLNLNINSSKKEMVLEKSSLEYMKSNWQKFQQKGVF CHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC QPNTFINKGVNGRWHNLLTTEQLKRYDIIMSEELETECAKWVKNAGFLPEINSIAFD CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC >Mature Secondary Structure MLPNYQSLPKNRIVIKSELQNSTIWDLIKPRNTDIVISSCYKSGTTLTQQIVNLMVNGHD CCCCCCCCCCCCEEEHHHCCCCHHHHHCCCCCCCEEEECHHCCCCHHHHHHHHHHHCCCH DFESLHDLSPWVEEIFITPPENKKSWIESLSSPRILKSHLLFEALPCYPEWKYIYLVRDG HHHHHHHHCHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECC RDVGLSLYHHYQSFLPEYFHENLPQDFAAFWDDFVETKEDKNQYWSYWKHIKSWWQVRNL CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PNVLLVHYHNLIYDKSQEIDRISEFLNLNINSSKKEMVLEKSSLEYMKSNWQKFQQKGVF CHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC QPNTFINKGVNGRWHNLLTTEQLKRYDIIMSEELETECAKWVKNAGFLPEINSIAFD CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA