The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475758

Identifier: 113475758

GI number: 113475758

Start: 3295678

End: 3296571

Strand: Reverse

Name: 113475758

Synonym: Tery_2110

Alternate gene names: NA

Gene position: 3296571-3295678 (Counterclockwise)

Preceding gene: 113475759

Following gene: 113475757

Centisome position: 42.54

GC content: 30.87

Gene sequence:

>894_bases
ATGCTGCCAAATTATCAATCATTACCGAAAAACCGGATAGTAATAAAAAGCGAGCTACAGAATTCAACAATCTGGGATTT
AATTAAGCCTAGAAATACTGATATTGTCATCTCCTCCTGTTATAAGTCAGGCACAACTTTAACTCAACAAATAGTTAATT
TAATGGTTAATGGCCATGATGATTTTGAATCTCTCCATGATCTTAGTCCCTGGGTAGAAGAAATTTTTATTACTCCCCCA
GAAAATAAAAAATCTTGGATAGAAAGTTTGTCTAGCCCCAGAATTTTAAAAAGTCATCTATTGTTTGAAGCTTTACCATG
TTACCCAGAATGGAAATATATTTATTTAGTAAGAGATGGCAGAGATGTGGGATTATCTTTATATCATCATTATCAATCTT
TCTTGCCTGAATATTTCCATGAAAATTTACCACAAGATTTTGCGGCTTTTTGGGATGATTTTGTAGAAACAAAAGAGGAT
AAAAATCAGTATTGGTCTTATTGGAAACATATAAAAAGTTGGTGGCAGGTAAGAAATTTACCGAATGTACTTTTAGTCCA
CTATCATAATTTAATCTATGATAAATCTCAAGAAATTGACAGAATTTCTGAATTTCTCAATCTAAATATCAATAGTTCAA
AAAAAGAGATGGTCTTAGAAAAAAGTTCTCTAGAATATATGAAGTCAAATTGGCAAAAGTTTCAGCAAAAAGGAGTCTTT
CAACCTAATACTTTTATTAATAAAGGAGTAAATGGTCGCTGGCACAATTTATTAACTACTGAACAGCTCAAAAGATATGA
TATAATTATGTCTGAAGAGTTAGAAACAGAATGTGCTAAGTGGGTAAAAAATGCTGGATTTTTACCTGAAATTAATTCAA
TAGCATTTGATTAG

Upstream 100 bases:

>100_bases
AGACGATCTTGATTTTTTTAGCATTAAACTAATCTAATTATTTAGATAATTAATCTAAAAATCATAAAGCAACTAAACGG
GAAAAATTTAGAAAATTATT

Downstream 100 bases:

>100_bases
GTTACCTAATTGTGAACAACTTATATTCATTACCATTTGTCTCAGACATTTCCACCAACTATAAATCTCTAGGAAAATCA
ATGAGCCTTTAAAAAAAGTA

Product: sulfotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MLPNYQSLPKNRIVIKSELQNSTIWDLIKPRNTDIVISSCYKSGTTLTQQIVNLMVNGHDDFESLHDLSPWVEEIFITPP
ENKKSWIESLSSPRILKSHLLFEALPCYPEWKYIYLVRDGRDVGLSLYHHYQSFLPEYFHENLPQDFAAFWDDFVETKED
KNQYWSYWKHIKSWWQVRNLPNVLLVHYHNLIYDKSQEIDRISEFLNLNINSSKKEMVLEKSSLEYMKSNWQKFQQKGVF
QPNTFINKGVNGRWHNLLTTEQLKRYDIIMSEELETECAKWVKNAGFLPEINSIAFD

Sequences:

>Translated_297_residues
MLPNYQSLPKNRIVIKSELQNSTIWDLIKPRNTDIVISSCYKSGTTLTQQIVNLMVNGHDDFESLHDLSPWVEEIFITPP
ENKKSWIESLSSPRILKSHLLFEALPCYPEWKYIYLVRDGRDVGLSLYHHYQSFLPEYFHENLPQDFAAFWDDFVETKED
KNQYWSYWKHIKSWWQVRNLPNVLLVHYHNLIYDKSQEIDRISEFLNLNINSSKKEMVLEKSSLEYMKSNWQKFQQKGVF
QPNTFINKGVNGRWHNLLTTEQLKRYDIIMSEELETECAKWVKNAGFLPEINSIAFD
>Mature_297_residues
MLPNYQSLPKNRIVIKSELQNSTIWDLIKPRNTDIVISSCYKSGTTLTQQIVNLMVNGHDDFESLHDLSPWVEEIFITPP
ENKKSWIESLSSPRILKSHLLFEALPCYPEWKYIYLVRDGRDVGLSLYHHYQSFLPEYFHENLPQDFAAFWDDFVETKED
KNQYWSYWKHIKSWWQVRNLPNVLLVHYHNLIYDKSQEIDRISEFLNLNINSSKKEMVLEKSSLEYMKSNWQKFQQKGVF
QPNTFINKGVNGRWHNLLTTEQLKRYDIIMSEELETECAKWVKNAGFLPEINSIAFD

Specific function: Involved in the synthesis of cell wall sulfolipids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sulfotransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI29550928, Length=261, Percent_Identity=29.5019157088123, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI29540539, Length=260, Percent_Identity=26.9230769230769, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI29540537, Length=260, Percent_Identity=26.9230769230769, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI29540535, Length=260, Percent_Identity=26.9230769230769, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI29540531, Length=260, Percent_Identity=26.9230769230769, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI4507305, Length=281, Percent_Identity=27.4021352313167, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI29550893, Length=261, Percent_Identity=25.6704980842912, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI4507303, Length=261, Percent_Identity=25.6704980842912, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI4885617, Length=273, Percent_Identity=27.4725274725275, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI28830308, Length=260, Percent_Identity=28.0769230769231, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI29550921, Length=257, Percent_Identity=26.4591439688716, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI10835035, Length=257, Percent_Identity=26.4591439688716, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI62868225, Length=257, Percent_Identity=26.4591439688716, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI62868223, Length=257, Percent_Identity=26.4591439688716, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI29540545, Length=261, Percent_Identity=28.3524904214559, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI56847626, Length=248, Percent_Identity=24.5967741935484, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI31563386, Length=254, Percent_Identity=28.740157480315, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI31563388, Length=251, Percent_Identity=28.2868525896414, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI7657633, Length=251, Percent_Identity=24.3027888446215, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI29029530, Length=290, Percent_Identity=23.448275862069, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI29540543, Length=170, Percent_Identity=24.7058823529412, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17566452, Length=291, Percent_Identity=27.1477663230241, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI221468277, Length=259, Percent_Identity=25.8687258687259, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24645281, Length=286, Percent_Identity=22.7272727272727, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221468280, Length=273, Percent_Identity=28.9377289377289, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI22026942, Length=273, Percent_Identity=28.9377289377289, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24653521, Length=290, Percent_Identity=24.8275862068966, Blast_Score=71, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000863 [H]

Pfam domain/function: PF00685 Sulfotransfer_1 [H]

EC number: NA

Molecular weight: Translated: 35392; Mature: 35392

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPNYQSLPKNRIVIKSELQNSTIWDLIKPRNTDIVISSCYKSGTTLTQQIVNLMVNGHD
CCCCCCCCCCCCEEEHHHCCCCHHHHHCCCCCCCEEEECHHCCCCHHHHHHHHHHHCCCH
DFESLHDLSPWVEEIFITPPENKKSWIESLSSPRILKSHLLFEALPCYPEWKYIYLVRDG
HHHHHHHHCHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECC
RDVGLSLYHHYQSFLPEYFHENLPQDFAAFWDDFVETKEDKNQYWSYWKHIKSWWQVRNL
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PNVLLVHYHNLIYDKSQEIDRISEFLNLNINSSKKEMVLEKSSLEYMKSNWQKFQQKGVF
CHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
QPNTFINKGVNGRWHNLLTTEQLKRYDIIMSEELETECAKWVKNAGFLPEINSIAFD
CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
>Mature Secondary Structure
MLPNYQSLPKNRIVIKSELQNSTIWDLIKPRNTDIVISSCYKSGTTLTQQIVNLMVNGHD
CCCCCCCCCCCCEEEHHHCCCCHHHHHCCCCCCCEEEECHHCCCCHHHHHHHHHHHCCCH
DFESLHDLSPWVEEIFITPPENKKSWIESLSSPRILKSHLLFEALPCYPEWKYIYLVRDG
HHHHHHHHCHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECC
RDVGLSLYHHYQSFLPEYFHENLPQDFAAFWDDFVETKEDKNQYWSYWKHIKSWWQVRNL
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PNVLLVHYHNLIYDKSQEIDRISEFLNLNINSSKKEMVLEKSSLEYMKSNWQKFQQKGVF
CHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
QPNTFINKGVNGRWHNLLTTEQLKRYDIIMSEELETECAKWVKNAGFLPEINSIAFD
CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA