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The map label for this gene is yugS [H]

Identifier: 113475751

GI number: 113475751

Start: 3276390

End: 3277850

Strand: Reverse

Name: yugS [H]

Synonym: Tery_2102

Alternate gene names: 113475751

Gene position: 3277850-3276390 (Counterclockwise)

Preceding gene: 113475752

Following gene: 113475748

Centisome position: 42.29

GC content: 33.95

Gene sequence:

>1461_bases
ATGTCACTAATGGTGACATTTTATATTAGTTTTATGACGGAGATACCAGATTTAGATATACTGTCACAATTTTTGTTAGT
TTTTTTACTAATTACTATTAATGCATTTTTTGTATTGGCCGAATTTTCTATTGTTTCTGTGCGAAGGTCACGTATTAATC
AATTAGTAGATGCAGGTGATGTTCAAGCAAAAATTGTTCAACAACTTCAAAGACACATAGAGCGACTTCTATCGACAACT
CAGTTAGGTATTACTTTATCTAGTTTTACTTTGGGTTGGATAGGTGCAAAAACTATGGTAGAAATCGTTACAAATGCTAT
AAAAACCATACCATTACCTATTCATATTGGTCAAGGGAACGATGACTCCGTAGCTATTACTATTGTCACCTTTTTGATTT
TGGCTTACCTACAAATTGTGCTCGGAGAGTTATGCCCAAAGTCAGTAGCACTCATTTATTCAGAACAGTTATCTAGATTA
TTAGGCCCTTTAAGTATAGCCATCTCTCGTTTGTTTAATCCGTTTATCTGGATTTTAAATCAATCTACTTATTGGTTATT
AAGACTGCTGGGAATTAGATCTACTGGTAGTGCCTGGAAAGCACCTGTTACTTCAGAAGAATTGCAATTAATTATCTCTA
CTTCTACAGAATCAATAGGTTTAGAAGCAGAAGAACGACAACTACTTAGTAATGTATTTGAATTTGGGGAAGTATTAGCT
GTAGAAATTATGGTCCCACGGACAAATATAGATACTATTTCTAGTACAGCTACTTTTCAAGATTTGTTAAATGAAGTTCA
GCTATCTGGTCATTCCAGATATCCTGTAGTTGGTGAATCAATAGATGATATTCAGGGCATTATTGACTTTAAAGAACTAG
CTAAACCTTTAGCGAAAGGATTATTATGCCCAAAAACTTCTATTTTATCTTGGGTTCGACCTGCAAGATTTGTTTCTGAA
CAAACTTATCTGAATGAGTTATTATCATTAATGCAACGAATGCGTCAAATTTCAAATAGTCCTCAGCACCCAGAAATGGT
AATAGTGGTAGATGAGTTTGGTGGAACTGCTGGATTAATTACACGGGAAGATTTAATTGCTGAAATTATTAGTAGTGATA
GTTATGAAGTAACAGGCTCTGAAGAACTTACCTTACAGATGTTAGATGATCAGACTTTTATTGTACAGGCACAATTAAGT
GTTGAAGAAGTTAATGAACTTTTAAATTTAGATTTGCCAGTGACTGAGGACTATCAGACTTTGGGAGGGTTTTTGATTTA
TCAATTACAAAAAATTCCCACTCAAGGAGAAAAGTTACACTACAAAAATCTTGAATTTACTGTCATCTCTGCTGAAGGTC
AACGTCTAGATAAAATCAATATTTGTCAATTAGAAGGGTCAGAAACTGAAACAACTATTAATCTAGTTTTAGAGGATGAG
GCGGGCAAAAAGCAAAGCTAA

Upstream 100 bases:

>100_bases
CATAAGTATGAAGAGCGAGAAATGCAGTTGGCTATAACGGTTATTCCTGTGAAAGTCCTGCTGCCCACAACTCCGATAGA
AGCAGGAAGTAAACATTAAA

Downstream 100 bases:

>100_bases
TTCATAATATCAGCTAATTGATAATTTCTCTTCTCAACGGAAGCTTGATAGTTAGGATTTTAATTAATATTGTTGATATT
TCTAATGACTGTTGAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MSLMVTFYISFMTEIPDLDILSQFLLVFLLITINAFFVLAEFSIVSVRRSRINQLVDAGDVQAKIVQQLQRHIERLLSTT
QLGITLSSFTLGWIGAKTMVEIVTNAIKTIPLPIHIGQGNDDSVAITIVTFLILAYLQIVLGELCPKSVALIYSEQLSRL
LGPLSIAISRLFNPFIWILNQSTYWLLRLLGIRSTGSAWKAPVTSEELQLIISTSTESIGLEAEERQLLSNVFEFGEVLA
VEIMVPRTNIDTISSTATFQDLLNEVQLSGHSRYPVVGESIDDIQGIIDFKELAKPLAKGLLCPKTSILSWVRPARFVSE
QTYLNELLSLMQRMRQISNSPQHPEMVIVVDEFGGTAGLITREDLIAEIISSDSYEVTGSEELTLQMLDDQTFIVQAQLS
VEEVNELLNLDLPVTEDYQTLGGFLIYQLQKIPTQGEKLHYKNLEFTVISAEGQRLDKINICQLEGSETETTINLVLEDE
AGKKQS

Sequences:

>Translated_486_residues
MSLMVTFYISFMTEIPDLDILSQFLLVFLLITINAFFVLAEFSIVSVRRSRINQLVDAGDVQAKIVQQLQRHIERLLSTT
QLGITLSSFTLGWIGAKTMVEIVTNAIKTIPLPIHIGQGNDDSVAITIVTFLILAYLQIVLGELCPKSVALIYSEQLSRL
LGPLSIAISRLFNPFIWILNQSTYWLLRLLGIRSTGSAWKAPVTSEELQLIISTSTESIGLEAEERQLLSNVFEFGEVLA
VEIMVPRTNIDTISSTATFQDLLNEVQLSGHSRYPVVGESIDDIQGIIDFKELAKPLAKGLLCPKTSILSWVRPARFVSE
QTYLNELLSLMQRMRQISNSPQHPEMVIVVDEFGGTAGLITREDLIAEIISSDSYEVTGSEELTLQMLDDQTFIVQAQLS
VEEVNELLNLDLPVTEDYQTLGGFLIYQLQKIPTQGEKLHYKNLEFTVISAEGQRLDKINICQLEGSETETTINLVLEDE
AGKKQS
>Mature_485_residues
SLMVTFYISFMTEIPDLDILSQFLLVFLLITINAFFVLAEFSIVSVRRSRINQLVDAGDVQAKIVQQLQRHIERLLSTTQ
LGITLSSFTLGWIGAKTMVEIVTNAIKTIPLPIHIGQGNDDSVAITIVTFLILAYLQIVLGELCPKSVALIYSEQLSRLL
GPLSIAISRLFNPFIWILNQSTYWLLRLLGIRSTGSAWKAPVTSEELQLIISTSTESIGLEAEERQLLSNVFEFGEVLAV
EIMVPRTNIDTISSTATFQDLLNEVQLSGHSRYPVVGESIDDIQGIIDFKELAKPLAKGLLCPKTSILSWVRPARFVSEQ
TYLNELLSLMQRMRQISNSPQHPEMVIVVDEFGGTAGLITREDLIAEIISSDSYEVTGSEELTLQMLDDQTFIVQAQLSV
EEVNELLNLDLPVTEDYQTLGGFLIYQLQKIPTQGEKLHYKNLEFTVISAEGQRLDKINICQLEGSETETTINLVLEDEA
GKKQS

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=393, Percent_Identity=30.7888040712468, Blast_Score=203, Evalue=2e-52,
Organism=Escherichia coli, GI145693175, Length=435, Percent_Identity=26.6666666666667, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1790664, Length=470, Percent_Identity=21.9148936170213, Blast_Score=131, Evalue=1e-31,
Organism=Escherichia coli, GI1786879, Length=260, Percent_Identity=26.9230769230769, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI87082033, Length=353, Percent_Identity=22.9461756373938, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1788119, Length=248, Percent_Identity=25.4032258064516, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 54274; Mature: 54143

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLMVTFYISFMTEIPDLDILSQFLLVFLLITINAFFVLAEFSIVSVRRSRINQLVDAGD
CCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VQAKIVQQLQRHIERLLSTTQLGITLSSFTLGWIGAKTMVEIVTNAIKTIPLPIHIGQGN
HHHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
DDSVAITIVTFLILAYLQIVLGELCPKSVALIYSEQLSRLLGPLSIAISRLFNPFIWILN
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
QSTYWLLRLLGIRSTGSAWKAPVTSEELQLIISTSTESIGLEAEERQLLSNVFEFGEVLA
CCHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHCEEE
VEIMVPRTNIDTISSTATFQDLLNEVQLSGHSRYPVVGESIDDIQGIIDFKELAKPLAKG
EEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
LLCPKTSILSWVRPARFVSEQTYLNELLSLMQRMRQISNSPQHPEMVIVVDEFGGTAGLI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCE
TREDLIAEIISSDSYEVTGSEELTLQMLDDQTFIVQAQLSVEEVNELLNLDLPVTEDYQT
EHHHHHHHHHCCCCEEECCCCCEEEEEECCCEEEEEEECCHHHHHHHHCCCCCCCCCHHH
LGGFLIYQLQKIPTQGEKLHYKNLEFTVISAEGQRLDKINICQLEGSETETTINLVLEDE
HHHHHHHHHHHCCCCCCCEEECCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEECC
AGKKQS
CCCCCC
>Mature Secondary Structure 
SLMVTFYISFMTEIPDLDILSQFLLVFLLITINAFFVLAEFSIVSVRRSRINQLVDAGD
CEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VQAKIVQQLQRHIERLLSTTQLGITLSSFTLGWIGAKTMVEIVTNAIKTIPLPIHIGQGN
HHHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
DDSVAITIVTFLILAYLQIVLGELCPKSVALIYSEQLSRLLGPLSIAISRLFNPFIWILN
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
QSTYWLLRLLGIRSTGSAWKAPVTSEELQLIISTSTESIGLEAEERQLLSNVFEFGEVLA
CCHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHCEEE
VEIMVPRTNIDTISSTATFQDLLNEVQLSGHSRYPVVGESIDDIQGIIDFKELAKPLAKG
EEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
LLCPKTSILSWVRPARFVSEQTYLNELLSLMQRMRQISNSPQHPEMVIVVDEFGGTAGLI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCE
TREDLIAEIISSDSYEVTGSEELTLQMLDDQTFIVQAQLSVEEVNELLNLDLPVTEDYQT
EHHHHHHHHHCCCCEEECCCCCEEEEEECCCEEEEEEECCHHHHHHHHCCCCCCCCCHHH
LGGFLIYQLQKIPTQGEKLHYKNLEFTVISAEGQRLDKINICQLEGSETETTINLVLEDE
HHHHHHHHHHHCCCCCCCEEECCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEECC
AGKKQS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]