The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475681

Identifier: 113475681

GI number: 113475681

Start: 3149682

End: 3150275

Strand: Reverse

Name: 113475681

Synonym: Tery_2022

Alternate gene names: NA

Gene position: 3150275-3149682 (Counterclockwise)

Preceding gene: 113475682

Following gene: 113475680

Centisome position: 40.65

GC content: 30.81

Gene sequence:

>594_bases
ATGACCGCGGGTATTATCCTAATATTGGCAATTTTACTTTTAGGTAGTGTAATCGCTACTATTAGTGATCGTATAGGTAA
AAAAGTAGGTAAAGCAAGACTAAGACTATTTAACCTCAGACCCCGCTATACTGCTGCATTAGTATCTATGCTCACTGGCA
GTATTCTTTCCGCTTTAACCTTAGCTACTTTATTTGCAACAAGCAAACCGTTAAGAAAAGGTGTTTTTAGAATAGATGAA
ATCCAAATCAAGCTTAATCAAACCAGCAAAGAACTGACAAAAGCTGAATTAGAAATAACTAAAATCAAGAATGAATTACA
AATATTAAAAAATGATTTAAGATTAGCTTATTCCGAGTTAAATCAAGTTAATCAATCTTTTCAGAAAACTTTAGACCAAA
AAGCTAAAACAGAGGCTAGACTAAAAATAGCTCAAAATCAATTAAATCAAGCTCAAGCAGAGAAAACTAGAATTGAAGCT
AAACTTAATTTAACTCAAAGTAGACTAAGTGATATTATACAAGAAAAAGAAACACTCAAACAAGAAATTGAGCAATTGCA
AGAAATAGATAGTCGAAAAATATTAGAAGACTAA

Upstream 100 bases:

>100_bases
ATCAAGATTACTTTACATAAAGCATATTTGATAAGGGTTTATGACCTGAAACAAGAATCAGAAGCTATCCTTACAATTAA
ACTATTACCAGCAGGCATTA

Downstream 100 bases:

>100_bases
ATGTATAATAGCATTTTTCATTCATAAAAAAATATCAAGAAATAGCATTAATTTAGTCAGTAATAAAAAATCTTTAAACA
TGATTTTAGGATTTGACCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MTAGIILILAILLLGSVIATISDRIGKKVGKARLRLFNLRPRYTAALVSMLTGSILSALTLATLFATSKPLRKGVFRIDE
IQIKLNQTSKELTKAELEITKIKNELQILKNDLRLAYSELNQVNQSFQKTLDQKAKTEARLKIAQNQLNQAQAEKTRIEA
KLNLTQSRLSDIIQEKETLKQEIEQLQEIDSRKILED

Sequences:

>Translated_197_residues
MTAGIILILAILLLGSVIATISDRIGKKVGKARLRLFNLRPRYTAALVSMLTGSILSALTLATLFATSKPLRKGVFRIDE
IQIKLNQTSKELTKAELEITKIKNELQILKNDLRLAYSELNQVNQSFQKTLDQKAKTEARLKIAQNQLNQAQAEKTRIEA
KLNLTQSRLSDIIQEKETLKQEIEQLQEIDSRKILED
>Mature_196_residues
TAGIILILAILLLGSVIATISDRIGKKVGKARLRLFNLRPRYTAALVSMLTGSILSALTLATLFATSKPLRKGVFRIDEI
QIKLNQTSKELTKAELEITKIKNELQILKNDLRLAYSELNQVNQSFQKTLDQKAKTEARLKIAQNQLNQAQAEKTRIEAK
LNLTQSRLSDIIQEKETLKQEIEQLQEIDSRKILED

Specific function: Unknown

COG id: COG4372

COG function: function code S; Uncharacterized protein conserved in bacteria with the myosin-like domain

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021435 [H]

Pfam domain/function: PF11283 DUF3084 [H]

EC number: NA

Molecular weight: Translated: 22252; Mature: 22121

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGIILILAILLLGSVIATISDRIGKKVGKARLRLFNLRPRYTAALVSMLTGSILSALT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LATLFATSKPLRKGVFRIDEIQIKLNQTSKELTKAELEITKIKNELQILKNDLRLAYSEL
HHHHHHCCHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQVNQSFQKTLDQKAKTEARLKIAQNQLNQAQAEKTRIEAKLNLTQSRLSDIIQEKETLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEIEQLQEIDSRKILED
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TAGIILILAILLLGSVIATISDRIGKKVGKARLRLFNLRPRYTAALVSMLTGSILSALT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LATLFATSKPLRKGVFRIDEIQIKLNQTSKELTKAELEITKIKNELQILKNDLRLAYSEL
HHHHHHCCHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQVNQSFQKTLDQKAKTEARLKIAQNQLNQAQAEKTRIEAKLNLTQSRLSDIIQEKETLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEIEQLQEIDSRKILED
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840; 8391534 [H]