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The map label for this gene is ygfA [C]

Identifier: 113475547

GI number: 113475547

Start: 2873960

End: 2874526

Strand: Reverse

Name: ygfA [C]

Synonym: Tery_1879

Alternate gene names: 113475547

Gene position: 2874526-2873960 (Counterclockwise)

Preceding gene: 113475548

Following gene: 113475546

Centisome position: 37.09

GC content: 34.57

Gene sequence:

>567_bases
ATGATCAAAAAAGAATTAAGAAGCTCACTATTAAAAAAACGTCAGTCTATGGCTGAGATGGAATGGAAAGAAAAGAGCGA
TCGCCTCTGTTACTACTTACAAAATTTCTCCCTATTCCAAAAAGCTAAAACAGTTTTAGCTTATATTAGTTTCCGTCAGG
AACCAGACCTAAGTTTATTATTTACAAATATTGGAGAACAAACAAAATTTTCTCAAAAAACTTGGGGGTTTCCACGCTGC
GAAAAAAAGTCTCTATTTTGGCATATTTGGCAACCAGAAAATCCTCTACAAAAAGGTGCTTATGGTCTTCTAGAACCAGA
GGTAAATGCACCATTATTACAGTCATCAAAAGTAGATTTAATTTTAGTTCCTGCTGTGGCTTGTAATCTTAATGGTTATC
GTTTAGGCTATGGTGGAGGTTTTTATGACCGGATGCTAAGTCAACAAGAATGGGCATCAAAACCTACTATTGGCATTGTA
TTTGAATTTGCTTATTTACAAGACTTACCTATAGATTCCTGGGATAAACCTCTTGATTTTGTTTGTACAGAAAATGGTAT
AAAGTAG

Upstream 100 bases:

>100_bases
ATACCTTATTTTAAAGTACAATATCGAACAATTTGAGTATAAGTCTAAATAAATCATAACTTACTCATTTTACTTTTCTA
ATTATAATTTTAGTAGATTA

Downstream 100 bases:

>100_bases
ATTTATTACTGTAAGTATTCAGCAGTCATTTTAGTTATCAGTTATCAGTAACGACCTCCTTCAGCCAAAAGCTGGCAATA
ACAGAAAATCGTATAAAGTA

Product: 5-formyltetrahydrofolate cyclo-ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MIKKELRSSLLKKRQSMAEMEWKEKSDRLCYYLQNFSLFQKAKTVLAYISFRQEPDLSLLFTNIGEQTKFSQKTWGFPRC
EKKSLFWHIWQPENPLQKGAYGLLEPEVNAPLLQSSKVDLILVPAVACNLNGYRLGYGGGFYDRMLSQQEWASKPTIGIV
FEFAYLQDLPIDSWDKPLDFVCTENGIK

Sequences:

>Translated_188_residues
MIKKELRSSLLKKRQSMAEMEWKEKSDRLCYYLQNFSLFQKAKTVLAYISFRQEPDLSLLFTNIGEQTKFSQKTWGFPRC
EKKSLFWHIWQPENPLQKGAYGLLEPEVNAPLLQSSKVDLILVPAVACNLNGYRLGYGGGFYDRMLSQQEWASKPTIGIV
FEFAYLQDLPIDSWDKPLDFVCTENGIK
>Mature_188_residues
MIKKELRSSLLKKRQSMAEMEWKEKSDRLCYYLQNFSLFQKAKTVLAYISFRQEPDLSLLFTNIGEQTKFSQKTWGFPRC
EKKSLFWHIWQPENPLQKGAYGLLEPEVNAPLLQSSKVDLILVPAVACNLNGYRLGYGGGFYDRMLSQQEWASKPTIGIV
FEFAYLQDLPIDSWDKPLDFVCTENGIK

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=178, Percent_Identity=26.4044943820225, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 21834; Mature: 21834

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKELRSSLLKKRQSMAEMEWKEKSDRLCYYLQNFSLFQKAKTVLAYISFRQEPDLSLL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
FTNIGEQTKFSQKTWGFPRCEKKSLFWHIWQPENPLQKGAYGLLEPEVNAPLLQSSKVDL
EECCCCCCCCCHHCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCE
ILVPAVACNLNGYRLGYGGGFYDRMLSQQEWASKPTIGIVFEFAYLQDLPIDSWDKPLDF
EEECEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEHHHCCCCCCCCCCCEE
VCTENGIK
EECCCCCC
>Mature Secondary Structure
MIKKELRSSLLKKRQSMAEMEWKEKSDRLCYYLQNFSLFQKAKTVLAYISFRQEPDLSLL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
FTNIGEQTKFSQKTWGFPRCEKKSLFWHIWQPENPLQKGAYGLLEPEVNAPLLQSSKVDL
EECCCCCCCCCHHCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCE
ILVPAVACNLNGYRLGYGGGFYDRMLSQQEWASKPTIGIVFEFAYLQDLPIDSWDKPLDF
EEECEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEHHHCCCCCCCCCCCEE
VCTENGIK
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]