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The map label for this gene is glgB

Identifier: 113475505

GI number: 113475505

Start: 2812502

End: 2814832

Strand: Reverse

Name: glgB

Synonym: Tery_1837

Alternate gene names: 113475505

Gene position: 2814832-2812502 (Counterclockwise)

Preceding gene: 113475506

Following gene: 113475504

Centisome position: 36.32

GC content: 41.27

Gene sequence:

>2331_bases
ATGACAATATCTGCTGATCAAGTTAACCAAATAGCTTGGAATCACCATCACGACCCCTTTCAAGTATTGGGTTCTCACCA
GATAGAACTCAGTGGCAAAACTATGACAGTGATCCGAGCATACCAACCAAGTGCTGAAGCTGTCTCTGTCATTTCTCCGA
TAGACCGCAAAGAGTACCCAATGCAGTCAGTCCATAACCCTCATTTTTTTGAATGTGTCATCAACACCCCAAAACTGGCC
AACTATCAACTTAAAATCAAAGAAGGAGAACACGAACGAGTTATCCATGACCCCTACGCTTTTCGCTCTGCAAAACTCAC
AGAATTCGACCTTCAACTATTTGGAGAAGGAAACCATCACCGCATCTACGAAAAACTAGGAGCGCATATTACCGAAGTTG
ATGGAATTAAAGGAGTCTACTTTGCTGTTTGGGCACCCAATGCTCGTAATGTTTCAATTTTAGGGAACTTCAACTATTGG
GATGGTCGTAAACACCAAATGCGCAAAGGACATACAGGAGTTTGGGAATTATTTATTCCCGATATTGGCCCTGGAGAAAG
CTATAAGTATGAGGTTAAAAACTGGGAAGGACACATCTATGAAAAAAGCGACCCCTATGGATATCAACAAGAAGTAAGAC
CCAAAACTGCTTCCATTGTTGTTGACTTAGACTCTTATACTTGGAATGACCAAGAATGGATGGAGAAACGTCGCCATACT
GACCCACTCACTCAACCTATTTCCGTCTATGAATGCCATTTTGGTTCTTGGATTCATGCTTCTGCTCATGAACCAGCTAA
ACTACCTAATGGGGAAACTGAGCCTGTAGTTCAAGTCTCGGAACTCAGGCCAGATGCCCGTTTTCTTACCTACCGCGAAT
TAGCAGATCGTCTAGTTTCTTACGTTAAAGATTTGGGCTATACCCACATTGAAATGTTACCTGTAGCAGAACATCCTTTT
GATGGTTCCTGGGGTTATCAGGTTACAGGATTTTTTGCCCCTACCTCTCGCTATGGTAGTGCCCAAGACTTTATGTATTT
CGTGGATAAATGTCATGAAAATGGTATTGGGGTAATTGTAGACTGGGTACCCGGACATTTTCCTAAAGATGGACATGGTT
TGGCTTTCTTTGACGGCACTCACCTCTATGAACATCCAGATCCCCGCAAAGGTGAACACAAGCAATGGGGTACTTTAGTA
TTTGACTATGGTCGTAATGAAGTTCGTAACTTTCTAGCGGCAAATGCACTTTTCTGGTTTGACAAATATCATATTGATGG
TGTCAGAGTAGATGCTGTTGCTTCTATGGTCTACCACAACTATATGAGACCTGATGGTGAATGGGTTGCTAACAAATACG
GAGGTGTAGAATATATTGAAGCTGCTGATTTCCTCCGTCAAGTTAATCATTTGCTTTTTAGTTACTATCCTGGTGTTCTC
TCTATTGCAGAGGAATCTACTTCTTGGCCTATGGTGACTTGGCCTACTTATGTTGGTGGTTTGGGTTTCAACTTTAAGTG
GAACATGGGTTGGATGCACGATATGCTGGACTATTTTGAGATGGACCCTTGGTTCCGACAGTTCCACCAAAACAATGTTA
CTTTCAGTATTTGGTATCACCATACTGAGAACTATATGTTGGCTCTGTCTCACGATGAAGTGGTACATTGCAAGAGCAGT
ATTTTGGGTAAGATGCCTGGAGATAATTGGCAGAAATTTGCTAATGTCCGGGCCTTGTTTGCTTATATGTTTACTCATCC
TGGTAAGAAGACTATGTTTATGGGGATGGAGCTTCCTCAGTGGGGTGAATGGGATGTTTGGGGTGATTTAGAATGGCATT
TGCTCGAATTTGATGCTCATCAAGGAATGAAACGATTTTTCCGGGATCTGAATCATCTCTATTGTTCTGAACCTGCTTTG
TATGAACAAGATTGTAATGAGGGAGGATTTGAATGGATAGATTGCAATGATAATAATCATAGTGTGGTGTCGTTTATTCG
TCGCGCTAAAGATGGGAAGGATTTTGTGGTAACGGTTTGTAATTTTACTCCTCAACCTCATAGTCATTATCGCGTCGGTG
TACCTGAACCAGGGTTTTATACTGAAATATTTAATAGCGATGCTGGTAACTATGGTGGCAGCAATATGGGTAATTTGGGT
GGTAAGTGGACTGATGATTGGTTTTTCCATGATTATCAACAGTCTTTAGATTTATGTTTGCCTCCTTTAGGTGTTGTAGT
GTTTCAGTTAGACAAGAAGAAAACGATAGCAATGATTCAAGAATCTGAAGATGTTGAAACTGTGGAAGCTAAAGCTAAAA
ATGCATCTTAA

Upstream 100 bases:

>100_bases
TGGGGAGGATGTCAACCTAGTTGACATAATATAATAGTATATCTTTCCAATTATGGTAGCATTCTTAATTAATTGTTAAC
AAATATATATATTGACAAAA

Downstream 100 bases:

>100_bases
GGATCAACTCGCTCAATAAAAACTCGGGTAAAATTGAGAAGGTTGGTAGTTGAATTTTTAATTAATACTGCCAACCTTTA
AAAGTGGCGTTAAGCTGACG

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE

Number of amino acids: Translated: 776; Mature: 775

Protein sequence:

>776_residues
MTISADQVNQIAWNHHHDPFQVLGSHQIELSGKTMTVIRAYQPSAEAVSVISPIDRKEYPMQSVHNPHFFECVINTPKLA
NYQLKIKEGEHERVIHDPYAFRSAKLTEFDLQLFGEGNHHRIYEKLGAHITEVDGIKGVYFAVWAPNARNVSILGNFNYW
DGRKHQMRKGHTGVWELFIPDIGPGESYKYEVKNWEGHIYEKSDPYGYQQEVRPKTASIVVDLDSYTWNDQEWMEKRRHT
DPLTQPISVYECHFGSWIHASAHEPAKLPNGETEPVVQVSELRPDARFLTYRELADRLVSYVKDLGYTHIEMLPVAEHPF
DGSWGYQVTGFFAPTSRYGSAQDFMYFVDKCHENGIGVIVDWVPGHFPKDGHGLAFFDGTHLYEHPDPRKGEHKQWGTLV
FDYGRNEVRNFLAANALFWFDKYHIDGVRVDAVASMVYHNYMRPDGEWVANKYGGVEYIEAADFLRQVNHLLFSYYPGVL
SIAEESTSWPMVTWPTYVGGLGFNFKWNMGWMHDMLDYFEMDPWFRQFHQNNVTFSIWYHHTENYMLALSHDEVVHCKSS
ILGKMPGDNWQKFANVRALFAYMFTHPGKKTMFMGMELPQWGEWDVWGDLEWHLLEFDAHQGMKRFFRDLNHLYCSEPAL
YEQDCNEGGFEWIDCNDNNHSVVSFIRRAKDGKDFVVTVCNFTPQPHSHYRVGVPEPGFYTEIFNSDAGNYGGSNMGNLG
GKWTDDWFFHDYQQSLDLCLPPLGVVVFQLDKKKTIAMIQESEDVETVEAKAKNAS

Sequences:

>Translated_776_residues
MTISADQVNQIAWNHHHDPFQVLGSHQIELSGKTMTVIRAYQPSAEAVSVISPIDRKEYPMQSVHNPHFFECVINTPKLA
NYQLKIKEGEHERVIHDPYAFRSAKLTEFDLQLFGEGNHHRIYEKLGAHITEVDGIKGVYFAVWAPNARNVSILGNFNYW
DGRKHQMRKGHTGVWELFIPDIGPGESYKYEVKNWEGHIYEKSDPYGYQQEVRPKTASIVVDLDSYTWNDQEWMEKRRHT
DPLTQPISVYECHFGSWIHASAHEPAKLPNGETEPVVQVSELRPDARFLTYRELADRLVSYVKDLGYTHIEMLPVAEHPF
DGSWGYQVTGFFAPTSRYGSAQDFMYFVDKCHENGIGVIVDWVPGHFPKDGHGLAFFDGTHLYEHPDPRKGEHKQWGTLV
FDYGRNEVRNFLAANALFWFDKYHIDGVRVDAVASMVYHNYMRPDGEWVANKYGGVEYIEAADFLRQVNHLLFSYYPGVL
SIAEESTSWPMVTWPTYVGGLGFNFKWNMGWMHDMLDYFEMDPWFRQFHQNNVTFSIWYHHTENYMLALSHDEVVHCKSS
ILGKMPGDNWQKFANVRALFAYMFTHPGKKTMFMGMELPQWGEWDVWGDLEWHLLEFDAHQGMKRFFRDLNHLYCSEPAL
YEQDCNEGGFEWIDCNDNNHSVVSFIRRAKDGKDFVVTVCNFTPQPHSHYRVGVPEPGFYTEIFNSDAGNYGGSNMGNLG
GKWTDDWFFHDYQQSLDLCLPPLGVVVFQLDKKKTIAMIQESEDVETVEAKAKNAS
>Mature_775_residues
TISADQVNQIAWNHHHDPFQVLGSHQIELSGKTMTVIRAYQPSAEAVSVISPIDRKEYPMQSVHNPHFFECVINTPKLAN
YQLKIKEGEHERVIHDPYAFRSAKLTEFDLQLFGEGNHHRIYEKLGAHITEVDGIKGVYFAVWAPNARNVSILGNFNYWD
GRKHQMRKGHTGVWELFIPDIGPGESYKYEVKNWEGHIYEKSDPYGYQQEVRPKTASIVVDLDSYTWNDQEWMEKRRHTD
PLTQPISVYECHFGSWIHASAHEPAKLPNGETEPVVQVSELRPDARFLTYRELADRLVSYVKDLGYTHIEMLPVAEHPFD
GSWGYQVTGFFAPTSRYGSAQDFMYFVDKCHENGIGVIVDWVPGHFPKDGHGLAFFDGTHLYEHPDPRKGEHKQWGTLVF
DYGRNEVRNFLAANALFWFDKYHIDGVRVDAVASMVYHNYMRPDGEWVANKYGGVEYIEAADFLRQVNHLLFSYYPGVLS
IAEESTSWPMVTWPTYVGGLGFNFKWNMGWMHDMLDYFEMDPWFRQFHQNNVTFSIWYHHTENYMLALSHDEVVHCKSSI
LGKMPGDNWQKFANVRALFAYMFTHPGKKTMFMGMELPQWGEWDVWGDLEWHLLEFDAHQGMKRFFRDLNHLYCSEPALY
EQDCNEGGFEWIDCNDNNHSVVSFIRRAKDGKDFVVTVCNFTPQPHSHYRVGVPEPGFYTEIFNSDAGNYGGSNMGNLGG
KWTDDWFFHDYQQSLDLCLPPLGVVVFQLDKKKTIAMIQESEDVETVEAKAKNAS

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family

Homologues:

Organism=Homo sapiens, GI189458812, Length=681, Percent_Identity=26.7254038179148, Blast_Score=187, Evalue=3e-47,
Organism=Escherichia coli, GI1789839, Length=752, Percent_Identity=47.0744680851064, Blast_Score=684, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=398, Percent_Identity=28.894472361809, Blast_Score=159, Evalue=6e-39,
Organism=Caenorhabditis elegans, GI32564391, Length=370, Percent_Identity=29.1891891891892, Blast_Score=137, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6320826, Length=682, Percent_Identity=24.9266862170088, Blast_Score=168, Evalue=4e-42,
Organism=Drosophila melanogaster, GI28573410, Length=619, Percent_Identity=28.9176090468498, Blast_Score=203, Evalue=4e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGB_TRIEI (Q114I1)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_721566.1
- ProteinModelPortal:   Q114I1
- STRING:   Q114I1
- GeneID:   4241913
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_1837
- NMPDR:   fig|203124.1.peg.2087
- eggNOG:   COG0296
- HOGENOM:   HBG287139
- OMA:   DGTCLYE
- PhylomeDB:   Q114I1
- ProtClustDB:   PRK05402
- BioCyc:   TERY203124:TERY_1837-MONOMER
- HAMAP:   MF_00685
- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756
- Gene3D:   G3DSA:2.60.40.1180
- Gene3D:   G3DSA:3.20.20.80
- Gene3D:   G3DSA:2.60.40.10
- TIGRFAMs:   TIGR01515

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48; SSF51445 Glyco_hydro_cat; SSF81296 Ig_E-set

EC number: =2.4.1.18

Molecular weight: Translated: 89967; Mature: 89835

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: ACT_SITE 326-326 ACT_SITE 361-361 ACT_SITE 366-366 ACT_SITE 429-429 ACT_SITE 431-431 ACT_SITE 484-484 ACT_SITE 551-551 ACT_SITE 552-552

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISADQVNQIAWNHHHDPFQVLGSHQIELSGKTMTVIRAYQPSAEAVSVISPIDRKEYP
CCCCHHHHHHHHHCCCCCHHHHHCCEEEEECCCEEEEEEEECCCCHHHHHHCCCCCCCCC
MQSVHNPHFFECVINTPKLANYQLKIKEGEHERVIHDPYAFRSAKLTEFDLQLFGEGNHH
HHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEECCHHHCCCCCEEEEEEEECCCCCH
RIYEKLGAHITEVDGIKGVYFAVWAPNARNVSILGNFNYWDGRKHQMRKGHTGVWELFIP
HHHHHHCCCEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHCCCCCEEEEEEC
DIGPGESYKYEVKNWEGHIYEKSDPYGYQQEVRPKTASIVVDLDSYTWNDQEWMEKRRHT
CCCCCCCEEEEEECCCCEEEECCCCCCCHHHCCCCEEEEEEEECCCCCCCHHHHHHHHCC
DPLTQPISVYECHFGSWIHASAHEPAKLPNGETEPVVQVSELRPDARFLTYRELADRLVS
CCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHH
YVKDLGYTHIEMLPVAEHPFDGSWGYQVTGFFAPTSRYGSAQDFMYFVDKCHENGIGVIV
HHHHCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEE
DWVPGHFPKDGHGLAFFDGTHLYEHPDPRKGEHKQWGTLVFDYGRNEVRNFLAANALFWF
ECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHEEEE
DKYHIDGVRVDAVASMVYHNYMRPDGEWVANKYGGVEYIEAADFLRQVNHLLFSYYPGVL
EEEEECCEEHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCE
SIAEESTSWPMVTWPTYVGGLGFNFKWNMGWMHDMLDYFEMDPWFRQFHQNNVTFSIWYH
EECCCCCCCCEEECCHHHCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHCCCCEEEEEEE
HTENYMLALSHDEVVHCKSSILGKMPGDNWQKFANVRALFAYMFTHPGKKTMFMGMELPQ
ECCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
WGEWDVWGDLEWHLLEFDAHQGMKRFFRDLNHLYCSEPALYEQDCNEGGFEWIDCNDNNH
CCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEECCCCCH
SVVSFIRRAKDGKDFVVTVCNFTPQPHSHYRVGVPEPGFYTEIFNSDAGNYGGSNMGNLG
HHHHHHHHCCCCCEEEEEEEECCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCC
GKWTDDWFFHDYQQSLDLCLPPLGVVVFQLDKKKTIAMIQESEDVETVEAKAKNAS
CCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHCCCCC
>Mature Secondary Structure 
TISADQVNQIAWNHHHDPFQVLGSHQIELSGKTMTVIRAYQPSAEAVSVISPIDRKEYP
CCCHHHHHHHHHCCCCCHHHHHCCEEEEECCCEEEEEEEECCCCHHHHHHCCCCCCCCC
MQSVHNPHFFECVINTPKLANYQLKIKEGEHERVIHDPYAFRSAKLTEFDLQLFGEGNHH
HHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEECCHHHCCCCCEEEEEEEECCCCCH
RIYEKLGAHITEVDGIKGVYFAVWAPNARNVSILGNFNYWDGRKHQMRKGHTGVWELFIP
HHHHHHCCCEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHCCCCCEEEEEEC
DIGPGESYKYEVKNWEGHIYEKSDPYGYQQEVRPKTASIVVDLDSYTWNDQEWMEKRRHT
CCCCCCCEEEEEECCCCEEEECCCCCCCHHHCCCCEEEEEEEECCCCCCCHHHHHHHHCC
DPLTQPISVYECHFGSWIHASAHEPAKLPNGETEPVVQVSELRPDARFLTYRELADRLVS
CCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHH
YVKDLGYTHIEMLPVAEHPFDGSWGYQVTGFFAPTSRYGSAQDFMYFVDKCHENGIGVIV
HHHHCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEE
DWVPGHFPKDGHGLAFFDGTHLYEHPDPRKGEHKQWGTLVFDYGRNEVRNFLAANALFWF
ECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHEEEE
DKYHIDGVRVDAVASMVYHNYMRPDGEWVANKYGGVEYIEAADFLRQVNHLLFSYYPGVL
EEEEECCEEHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCE
SIAEESTSWPMVTWPTYVGGLGFNFKWNMGWMHDMLDYFEMDPWFRQFHQNNVTFSIWYH
EECCCCCCCCEEECCHHHCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHCCCCEEEEEEE
HTENYMLALSHDEVVHCKSSILGKMPGDNWQKFANVRALFAYMFTHPGKKTMFMGMELPQ
ECCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
WGEWDVWGDLEWHLLEFDAHQGMKRFFRDLNHLYCSEPALYEQDCNEGGFEWIDCNDNNH
CCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEECCCCCH
SVVSFIRRAKDGKDFVVTVCNFTPQPHSHYRVGVPEPGFYTEIFNSDAGNYGGSNMGNLG
HHHHHHHHCCCCCEEEEEEEECCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCC
GKWTDDWFFHDYQQSLDLCLPPLGVVVFQLDKKKTIAMIQESEDVETVEAKAKNAS
CCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA