The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475504

Identifier: 113475504

GI number: 113475504

Start: 2811499

End: 2812203

Strand: Reverse

Name: 113475504

Synonym: Tery_1836

Alternate gene names: NA

Gene position: 2812203-2811499 (Counterclockwise)

Preceding gene: 113475505

Following gene: 113475501

Centisome position: 36.29

GC content: 38.01

Gene sequence:

>705_bases
ATGTTTACTAACAAGATAGCATCGGTTTATTTACGGTTCTTTTTTTTCGGTTTTGCTATTTGGATGGTAGCTTTCTATTT
TTTGTTTTCAATTCCGACTACAGCAGTTACTCCTCAAAATTTACCTTCTCTGAAAGTTTATCCTCTACCAGAAACTTTGG
CACAATGGCAAGACCCTAGTGGTAGTGGTGATTATTTTGATCAAATTGAAGTTCAGGATGTAGGTTATCTAATTTGGTCG
CAATTTCCGATCAAGGTTTATGTCGAATCTTCTGATAATGATGAGTCTCGCTCTCGTCAATGGGTTAAGACTGTAGTAGA
TGCTATTTGGGAATGGAATATTTATTTACCTTTGCAAGTGGTAGATAGCCCAGAAGTTGCTGATATTAAAATTTTTAACA
AGCGACCTCCTCTGAGAGCAGGAAATTTAAGAGCGCGTTCGGCAGAAGCTCGCTATCAGTTATCTGAAGATGAGAATGGT
ATTTTATCTCATAATTTTGTGATTTGGTTGAGTCCTATGCAAGTAGGTAAATATCTGCCTGCTGCTGCTCGTCATGAGTT
TGGTCATGCTTTGGGTATTTGGGGTCATAGTCCTGAGAAAACTGATGTTATGTATTATTCTCAGGTGGCAGAACCTCCTC
CTATTTCATCTAGGGATATTAATACTCTGAAGCGGATATATTTGCAAAGTACTAGACTAGGCTAA

Upstream 100 bases:

>100_bases
AAACCCGGTACTGGCGTAGACGTATTTTGTTCAAAACAGTTGATGGCTAAGTGCTGACTTCTGAGTAGTTCTTTAACAAA
CACTTCTCAAGCTTGGTATA

Downstream 100 bases:

>100_bases
AAAAAATATAGTCATAACTTACACAGAAACCGAGTTGAGCAACTAAATTTCCTGGTTTTAAGAACAATAAATTATTCATA
GTTTATAACAAAAATAAGCT

Product: peptidase M10A and M12B, matrixin and adamalysin

Products: NA

Alternate protein names: Zn-Dependent Protease; Peptidase

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MFTNKIASVYLRFFFFGFAIWMVAFYFLFSIPTTAVTPQNLPSLKVYPLPETLAQWQDPSGSGDYFDQIEVQDVGYLIWS
QFPIKVYVESSDNDESRSRQWVKTVVDAIWEWNIYLPLQVVDSPEVADIKIFNKRPPLRAGNLRARSAEARYQLSEDENG
ILSHNFVIWLSPMQVGKYLPAAARHEFGHALGIWGHSPEKTDVMYYSQVAEPPPISSRDINTLKRIYLQSTRLG

Sequences:

>Translated_234_residues
MFTNKIASVYLRFFFFGFAIWMVAFYFLFSIPTTAVTPQNLPSLKVYPLPETLAQWQDPSGSGDYFDQIEVQDVGYLIWS
QFPIKVYVESSDNDESRSRQWVKTVVDAIWEWNIYLPLQVVDSPEVADIKIFNKRPPLRAGNLRARSAEARYQLSEDENG
ILSHNFVIWLSPMQVGKYLPAAARHEFGHALGIWGHSPEKTDVMYYSQVAEPPPISSRDINTLKRIYLQSTRLG
>Mature_234_residues
MFTNKIASVYLRFFFFGFAIWMVAFYFLFSIPTTAVTPQNLPSLKVYPLPETLAQWQDPSGSGDYFDQIEVQDVGYLIWS
QFPIKVYVESSDNDESRSRQWVKTVVDAIWEWNIYLPLQVVDSPEVADIKIFNKRPPLRAGNLRARSAEARYQLSEDENG
ILSHNFVIWLSPMQVGKYLPAAARHEFGHALGIWGHSPEKTDVMYYSQVAEPPPISSRDINTLKRIYLQSTRLG

Specific function: Unknown

COG id: COG5549

COG function: function code O; Predicted Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26935; Mature: 26935

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTNKIASVYLRFFFFGFAIWMVAFYFLFSIPTTAVTPQNLPSLKVYPLPETLAQWQDPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHCCCCC
GSGDYFDQIEVQDVGYLIWSQFPIKVYVESSDNDESRSRQWVKTVVDAIWEWNIYLPLQV
CCCCCCCEEEHHHHCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEE
VDSPEVADIKIFNKRPPLRAGNLRARSAEARYQLSEDENGILSHNFVIWLSPMQVGKYLP
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCEEECCEEEEECHHHHHHCCC
AAARHEFGHALGIWGHSPEKTDVMYYSQVAEPPPISSRDINTLKRIYLQSTRLG
HHHHHHCCCEEEECCCCCCCCCEEEEHHCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFTNKIASVYLRFFFFGFAIWMVAFYFLFSIPTTAVTPQNLPSLKVYPLPETLAQWQDPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHCCCCC
GSGDYFDQIEVQDVGYLIWSQFPIKVYVESSDNDESRSRQWVKTVVDAIWEWNIYLPLQV
CCCCCCCEEEHHHHCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEE
VDSPEVADIKIFNKRPPLRAGNLRARSAEARYQLSEDENGILSHNFVIWLSPMQVGKYLP
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCEEECCEEEEECHHHHHHCCC
AAARHEFGHALGIWGHSPEKTDVMYYSQVAEPPPISSRDINTLKRIYLQSTRLG
HHHHHHCCCEEEECCCCCCCCCEEEEHHCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA