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The map label for this gene is petA

Identifier: 113475469

GI number: 113475469

Start: 2745892

End: 2746869

Strand: Reverse

Name: petA

Synonym: Tery_1798

Alternate gene names: 113475469

Gene position: 2746869-2745892 (Counterclockwise)

Preceding gene: 113475470

Following gene: 113475468

Centisome position: 35.44

GC content: 39.98

Gene sequence:

>978_bases
ATGTCAAAAATAAATTTATCAACTATGTGGAGTAGTTTCATTAAGAAGATCGCCAAGACAATTTTAGTAGCGATCGCATG
CATATCACTATTTCTCACAAGTTCCCCAGCAGCAAATGCCTATCCTTTCTGGGCACAAGAAACTGCTCCAGCAACTCCCA
GAGAGGCTACAGGCAGAATTGTCTGTGCTAACTGTCACCTTGGTGCCAAACTAACTGAAGTAGAAGTACCTCAGTCTGTA
CTACCGGATACAGTATTTAAGGCTGTTGTTAAAATTCCCTATGATACTGATGTTCAACAAGTATTAGGTGATGGTAGCAA
AGGTGGCTTAAATGTAGGTGCTGTATTGATGTTGCCTGAGGGCTTTAAAATTGCACCTGAAGATAGAATACCTCAAGAGT
GGCAAGAAGAACTAGCTGACCTTTATTTCATGCCTTACTCTGAAGAGCAGGAAAATGTTCTTCTATTCGGACCAATGCCA
GGGGATGAATACCAAGAAGTTGTATTCCCTATATTATCTCCAGATCCTGCAACAGATAAATCTATCCACTTTGGTAAATA
TGCTGTTCATGCTGGAGGTAACCGAGGACGTGGCCAGGTTTATCCTGCTGGTAATAAGAGCAATAATACTACTTATAACG
TGTCTGCTAGTGGTAAGATTACCGATATTACTTTTGAAGAATACGTAGGTAATCAAATCACTATTGAAACTCCCGATAGT
GAGACTGTTGTAGATCTAGTTCCTCCAGGCCCTGAACTTTTAGTTGCTGTAGGAGATACTGTTGAAGCAGGTCAGGTTAT
TACTAATAACCCTAATGTCGGTGGTTTTGGTCAAGCAGATACGGAAATTGTGCTGCAAGATGCAAACCGAGTTAAATGGT
TAATGGCATTTTTTGCTTTGGTTATGCTAGCTCAAATTATGTTGGTCTTGAAGAAAAAACAAGTGGAGAAAGTTCAAGCT
GCTGAAATGAATTTTTAG

Upstream 100 bases:

>100_bases
GGATCAAGTAGCTGCTATTTGTGATAGCTCCGATGGTTAATGGTGGTACAACGTCAAATTTGTAGAATTTTTTGATTTTT
GAGAGAAGACATAATAGGTA

Downstream 100 bases:

>100_bases
GTTGTCTGAGTTTTTCCCTTGAAAATTGACTGATGGGGAGCAAAGCATCAGCAGTGGAGGTAAACTTCATTTCTGAAGCT
TTGCTCTTTTTAATACCAAT

Product: apocytochrome f

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MSKINLSTMWSSFIKKIAKTILVAIACISLFLTSSPAANAYPFWAQETAPATPREATGRIVCANCHLGAKLTEVEVPQSV
LPDTVFKAVVKIPYDTDVQQVLGDGSKGGLNVGAVLMLPEGFKIAPEDRIPQEWQEELADLYFMPYSEEQENVLLFGPMP
GDEYQEVVFPILSPDPATDKSIHFGKYAVHAGGNRGRGQVYPAGNKSNNTTYNVSASGKITDITFEEYVGNQITIETPDS
ETVVDLVPPGPELLVAVGDTVEAGQVITNNPNVGGFGQADTEIVLQDANRVKWLMAFFALVMLAQIMLVLKKKQVEKVQA
AEMNF

Sequences:

>Translated_325_residues
MSKINLSTMWSSFIKKIAKTILVAIACISLFLTSSPAANAYPFWAQETAPATPREATGRIVCANCHLGAKLTEVEVPQSV
LPDTVFKAVVKIPYDTDVQQVLGDGSKGGLNVGAVLMLPEGFKIAPEDRIPQEWQEELADLYFMPYSEEQENVLLFGPMP
GDEYQEVVFPILSPDPATDKSIHFGKYAVHAGGNRGRGQVYPAGNKSNNTTYNVSASGKITDITFEEYVGNQITIETPDS
ETVVDLVPPGPELLVAVGDTVEAGQVITNNPNVGGFGQADTEIVLQDANRVKWLMAFFALVMLAQIMLVLKKKQVEKVQA
AEMNF
>Mature_324_residues
SKINLSTMWSSFIKKIAKTILVAIACISLFLTSSPAANAYPFWAQETAPATPREATGRIVCANCHLGAKLTEVEVPQSVL
PDTVFKAVVKIPYDTDVQQVLGDGSKGGLNVGAVLMLPEGFKIAPEDRIPQEWQEELADLYFMPYSEEQENVLLFGPMPG
DEYQEVVFPILSPDPATDKSIHFGKYAVHAGGNRGRGQVYPAGNKSNNTTYNVSASGKITDITFEEYVGNQITIETPDSE
TVVDLVPPGPELLVAVGDTVEAGQVITNNPNVGGFGQADTEIVLQDANRVKWLMAFFALVMLAQIMLVLKKKQVEKVQAA
EMNF

Specific function: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome f family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CYF_TRIEI (Q114L7)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_721530.1
- ProteinModelPortal:   Q114L7
- SMR:   Q114L7
- STRING:   Q114L7
- GeneID:   4243780
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_1798
- NMPDR:   fig|203124.1.peg.419
- eggNOG:   NOG04227
- HOGENOM:   HBG750208
- OMA:   AYPFWAQ
- ProtClustDB:   PRK02693
- BioCyc:   TERY203124:TERY_1798-MONOMER
- GO:   GO:0015979
- GO:   GO:0006810
- HAMAP:   MF_00610
- InterPro:   IPR002325
- InterPro:   IPR011054
- Gene3D:   G3DSA:2.60.40.830
- PRINTS:   PR00610

Pfam domain/function: PF01333 Apocytochr_F_C; SSF49441 Apocyt_F; SSF51246 Rudmnt_hyb_motif

EC number: NA

Molecular weight: Translated: 35314; Mature: 35183

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS51010 CYTF

Important sites: BINDING 62-62 BINDING 65-65

Signals:

None

Transmembrane regions:

HASH(0x17a91508)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKINLSTMWSSFIKKIAKTILVAIACISLFLTSSPAANAYPFWAQETAPATPREATGRI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCE
VCANCHLGAKLTEVEVPQSVLPDTVFKAVVKIPYDTDVQQVLGDGSKGGLNVGAVLMLPE
EEEECCCCCEEEEECCCHHHCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEEEEEECC
GFKIAPEDRIPQEWQEELADLYFMPYSEEQENVLLFGPMPGDEYQEVVFPILSPDPATDK
CCEECCCCCCCHHHHHHHHHEEECCCCCCCCCEEEEECCCCCCHHHHEEEECCCCCCCCC
SIHFGKYAVHAGGNRGRGQVYPAGNKSNNTTYNVSASGKITDITFEEYVGNQITIETPDS
CEECCEEEEECCCCCCCCCEEECCCCCCCEEEEEECCCEEEEEEHHHHCCCEEEEECCCC
ETVVDLVPPGPELLVAVGDTVEAGQVITNNPNVGGFGQADTEIVLQDANRVKWLMAFFAL
CEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHH
VMLAQIMLVLKKKQVEKVQAAEMNF
HHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure 
SKINLSTMWSSFIKKIAKTILVAIACISLFLTSSPAANAYPFWAQETAPATPREATGRI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCE
VCANCHLGAKLTEVEVPQSVLPDTVFKAVVKIPYDTDVQQVLGDGSKGGLNVGAVLMLPE
EEEECCCCCEEEEECCCHHHCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEEEEEECC
GFKIAPEDRIPQEWQEELADLYFMPYSEEQENVLLFGPMPGDEYQEVVFPILSPDPATDK
CCEECCCCCCCHHHHHHHHHEEECCCCCCCCCEEEEECCCCCCHHHHEEEECCCCCCCCC
SIHFGKYAVHAGGNRGRGQVYPAGNKSNNTTYNVSASGKITDITFEEYVGNQITIETPDS
CEECCEEEEECCCCCCCCCEEECCCCCCCEEEEEECCCEEEEEEHHHHCCCEEEEECCCC
ETVVDLVPPGPELLVAVGDTVEAGQVITNNPNVGGFGQADTEIVLQDANRVKWLMAFFAL
CEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHH
VMLAQIMLVLKKKQVEKVQAAEMNF
HHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA