The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475407

Identifier: 113475407

GI number: 113475407

Start: 2638093

End: 2640024

Strand: Reverse

Name: 113475407

Synonym: Tery_1733

Alternate gene names: NA

Gene position: 2640024-2638093 (Counterclockwise)

Preceding gene: 113475408

Following gene: 113475406

Centisome position: 34.06

GC content: 35.97

Gene sequence:

>1932_bases
ATGGTTTTAGAATTATCTATTGTTAGGATATTTAAATCTGGAGGTGGTGTCGCTGGCTCTGGTTTTTTGGTTTCTAATGA
GTATATTTTAACTTGTGCTCATGTAGTGGCTTATTGTTTAGATACTCCTAAAAAAACTGCACATATAATTATGAGGCAGA
AAGAAATTCCTGATGAAATTATTGAGGTTAATTTTCCTATTTTTGAGAAAGGTAAGATAGGTGAAAAACTTGAGACAAAA
GTGACTTTTTGGCGACCTCTAAATGATCAGGAAAATATACAAGATATTGCAGTATTAAAACTAATAAATTCTGATCTACT
TCCCGAAGATGCTAAACCAATTAATTTAATTCAAATAGGAAATCAATCTCTTAAGGAAAATGAGTTTGAAGCATTAGGTT
TCCCAAAAAAAGGGAGCGATGGGGAGTGGGCTACTGGAAAATTGATGGGACCAATAGGCCGAGGTCTTATCCAACTTGAG
GGTACTAAACAGACAGGGCTTCGCTTGGAGTCAGGGTTTAGTGGTACTGCTATCTGGGACAAAAATCTTCAGGGTGTTGT
GGGTATGGCGGTAAAAGCAGACCAGGAACGCCCTGAGGCTAAAGTGGCTTTTATGATTCCCACGGACCTAATACTTCAAG
TTGGGGATTTGGCCACGGTTTGTCGCGTTGATGGTAGGATACAAGGAGCGATCGCTATTTTGGAAAATTATTTTGAAGAT
TATACCACAGAAATACGCTATGCTTACAACCTATCTTTGCCAGAAATTTCTATTCCTTTAAGTTCTGGGAAATCTCTAGA
TGAGTACCCTGGATCTTTGAATGAGATGATTCAAAATTTGGATGACCGGACAAAGGAAAATTATTCTTTGCTGGAGAGAT
TTATCTGTTTTTTATTACTGCATCTTGAGGATTTAAAAAAACCTTCTGAGCTTTGCCAGAAATTAACAGAATGGTTGGAA
AAATATTCGCAAAATATTGAAGATTTGAAGGCTGTTTTAAGAAAAGAGAAAGCTCTGAAAAATCAGGAAAATTTTCAGAT
TAAACAACCAGAACCTTATCTATTAGTAGCTGCTATTGAAAAGAGTAAGGGTTTTATTTTGAAGGCATGGCTAATTGAAA
ATCCTCAAAATTATACTCCGGAAAATCCTCAAGGTTTCCATTCTTTTATTGATGAAGAAAATGTTCTTATGAATGCAAAA
GGAACTATAGTTAGTAATAAAAATACTTCGGAGTTTAACCAAGCTAAAAATTTGACTGAATTATTACAGTTCTTTTGGGC
TGATGTTTCGGAACGTTATGATTTTAATCTAGAGAAAATTGCAATATTTTTGCCTTATAAATTAATTGACCGGGATATTA
AGCCGGTAGATCAATATATAAGTGATCCGAATATACCTGAGTATTTTCAAACTTTATTGGGAGAACAGTGTGAAATCACT
CTCAGGTTTTCAGAACGCCTTAGGCTGTCTGGAAATTCTAATGCTGAATTAAATAAATTTAACCAAAAGTGGCGATCGCT
AACTAGCAGACAAAGTGCAAGAGTAATTGATATTTTTCATCCTTCGGCTACTAGTGGTAATAGGAAGAAGTTTTTTCGAC
AAATTTTTGCTGACGATGTGGCGGCAGTAAGATTAACAGAAGTGCTGCAACCAGAGAAACGAGAATCAGTTATGGAAGCT
TTTTACTATGCTGGAATTCCTGTGGCGCTATGGATGAGGCCAGAAGCAGAAAATATTGACTGTGCTGAGGAACTGCAAAA
TATCTGTAACGCTTGTAACTCTTTGTCAAATTTACCTAAAGCTATAAAAGCAAAACGTTCTGAAGCTTGGGAACAAGATA
TTGACAGACATATTGGTAATCACTTATCATTACTTTGGGAGGATCCTGATATTGTTCCACCTGTTAATGAACTGAGGATG
TTGGAGTCATGA

Upstream 100 bases:

>100_bases
ATGAAATTACTCTGAAATGGAATAAGACGGAGGGTTAGTAACGGCAAAGTTGGCTATGGATAACTATAGAGTTTAAAAAG
TTGGAAGTGGATAAGGTTTA

Downstream 100 bases:

>100_bases
ATAACTGGGAAATTTTTAAGGAAAACACAGAACCTCATGATGGTATTCAAAATTTGCCACCTCCTCCTAGTTGGCGACCT
TTTGGTCAAGAAAACAGACC

Product: peptidase S1 and S6, chymotrypsin/Hap

Products: NA

Alternate protein names: WD-40 Repeat-Containing Protein

Number of amino acids: Translated: 643; Mature: 643

Protein sequence:

>643_residues
MVLELSIVRIFKSGGGVAGSGFLVSNEYILTCAHVVAYCLDTPKKTAHIIMRQKEIPDEIIEVNFPIFEKGKIGEKLETK
VTFWRPLNDQENIQDIAVLKLINSDLLPEDAKPINLIQIGNQSLKENEFEALGFPKKGSDGEWATGKLMGPIGRGLIQLE
GTKQTGLRLESGFSGTAIWDKNLQGVVGMAVKADQERPEAKVAFMIPTDLILQVGDLATVCRVDGRIQGAIAILENYFED
YTTEIRYAYNLSLPEISIPLSSGKSLDEYPGSLNEMIQNLDDRTKENYSLLERFICFLLLHLEDLKKPSELCQKLTEWLE
KYSQNIEDLKAVLRKEKALKNQENFQIKQPEPYLLVAAIEKSKGFILKAWLIENPQNYTPENPQGFHSFIDEENVLMNAK
GTIVSNKNTSEFNQAKNLTELLQFFWADVSERYDFNLEKIAIFLPYKLIDRDIKPVDQYISDPNIPEYFQTLLGEQCEIT
LRFSERLRLSGNSNAELNKFNQKWRSLTSRQSARVIDIFHPSATSGNRKKFFRQIFADDVAAVRLTEVLQPEKRESVMEA
FYYAGIPVALWMRPEAENIDCAEELQNICNACNSLSNLPKAIKAKRSEAWEQDIDRHIGNHLSLLWEDPDIVPPVNELRM
LES

Sequences:

>Translated_643_residues
MVLELSIVRIFKSGGGVAGSGFLVSNEYILTCAHVVAYCLDTPKKTAHIIMRQKEIPDEIIEVNFPIFEKGKIGEKLETK
VTFWRPLNDQENIQDIAVLKLINSDLLPEDAKPINLIQIGNQSLKENEFEALGFPKKGSDGEWATGKLMGPIGRGLIQLE
GTKQTGLRLESGFSGTAIWDKNLQGVVGMAVKADQERPEAKVAFMIPTDLILQVGDLATVCRVDGRIQGAIAILENYFED
YTTEIRYAYNLSLPEISIPLSSGKSLDEYPGSLNEMIQNLDDRTKENYSLLERFICFLLLHLEDLKKPSELCQKLTEWLE
KYSQNIEDLKAVLRKEKALKNQENFQIKQPEPYLLVAAIEKSKGFILKAWLIENPQNYTPENPQGFHSFIDEENVLMNAK
GTIVSNKNTSEFNQAKNLTELLQFFWADVSERYDFNLEKIAIFLPYKLIDRDIKPVDQYISDPNIPEYFQTLLGEQCEIT
LRFSERLRLSGNSNAELNKFNQKWRSLTSRQSARVIDIFHPSATSGNRKKFFRQIFADDVAAVRLTEVLQPEKRESVMEA
FYYAGIPVALWMRPEAENIDCAEELQNICNACNSLSNLPKAIKAKRSEAWEQDIDRHIGNHLSLLWEDPDIVPPVNELRM
LES
>Mature_643_residues
MVLELSIVRIFKSGGGVAGSGFLVSNEYILTCAHVVAYCLDTPKKTAHIIMRQKEIPDEIIEVNFPIFEKGKIGEKLETK
VTFWRPLNDQENIQDIAVLKLINSDLLPEDAKPINLIQIGNQSLKENEFEALGFPKKGSDGEWATGKLMGPIGRGLIQLE
GTKQTGLRLESGFSGTAIWDKNLQGVVGMAVKADQERPEAKVAFMIPTDLILQVGDLATVCRVDGRIQGAIAILENYFED
YTTEIRYAYNLSLPEISIPLSSGKSLDEYPGSLNEMIQNLDDRTKENYSLLERFICFLLLHLEDLKKPSELCQKLTEWLE
KYSQNIEDLKAVLRKEKALKNQENFQIKQPEPYLLVAAIEKSKGFILKAWLIENPQNYTPENPQGFHSFIDEENVLMNAK
GTIVSNKNTSEFNQAKNLTELLQFFWADVSERYDFNLEKIAIFLPYKLIDRDIKPVDQYISDPNIPEYFQTLLGEQCEIT
LRFSERLRLSGNSNAELNKFNQKWRSLTSRQSARVIDIFHPSATSGNRKKFFRQIFADDVAAVRLTEVLQPEKRESVMEA
FYYAGIPVALWMRPEAENIDCAEELQNICNACNSLSNLPKAIKAKRSEAWEQDIDRHIGNHLSLLWEDPDIVPPVNELRM
LES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73194; Mature: 73194

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLELSIVRIFKSGGGVAGSGFLVSNEYILTCAHVVAYCLDTPKKTAHIIMRQKEIPDEI
CEEEEEEHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHH
IEVNFPIFEKGKIGEKLETKVTFWRPLNDQENIQDIAVLKLINSDLLPEDAKPINLIQIG
HCCCCCEECCCCCCCHHHCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEC
NQSLKENEFEALGFPKKGSDGEWATGKLMGPIGRGLIQLEGTKQTGLRLESGFSGTAIWD
CCHHCCCCHHHCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCEEECCCCCCEEEC
KNLQGVVGMAVKADQERPEAKVAFMIPTDLILQVGDLATVCRVDGRIQGAIAILENYFED
CCCCCHHHHEEECCCCCCCCEEEEEECHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHH
YTTEIRYAYNLSLPEISIPLSSGKSLDEYPGSLNEMIQNLDDRTKENYSLLERFICFLLL
HHHEEEEEEECCCCCEEEECCCCCCCHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
HLEDLKKPSELCQKLTEWLEKYSQNIEDLKAVLRKEKALKNQENFQIKQPEPYLLVAAIE
HHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEEE
KSKGFILKAWLIENPQNYTPENPQGFHSFIDEENVLMNAKGTIVSNKNTSEFNQAKNLTE
CCCCEEEEEEEECCCCCCCCCCCCHHHHHCCCCCEEEECCCCEEECCCCHHHHHHHHHHH
LLQFFWADVSERYDFNLEKIAIFLPYKLIDRDIKPVDQYISDPNIPEYFQTLLGEQCEIT
HHHHHHHHHHHHCCCCHHHEEEEECHHHHCCCCHHHHHHCCCCCCHHHHHHHCCCCEEEE
LRFSERLRLSGNSNAELNKFNQKWRSLTSRQSARVIDIFHPSATSGNRKKFFRQIFADDV
EEEECEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
AAVRLTEVLQPEKRESVMEAFYYAGIPVALWMRPEAENIDCAEELQNICNACNSLSNLPK
HHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCHH
AIKAKRSEAWEQDIDRHIGNHLSLLWEDPDIVPPVNELRMLES
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MVLELSIVRIFKSGGGVAGSGFLVSNEYILTCAHVVAYCLDTPKKTAHIIMRQKEIPDEI
CEEEEEEHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHH
IEVNFPIFEKGKIGEKLETKVTFWRPLNDQENIQDIAVLKLINSDLLPEDAKPINLIQIG
HCCCCCEECCCCCCCHHHCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEC
NQSLKENEFEALGFPKKGSDGEWATGKLMGPIGRGLIQLEGTKQTGLRLESGFSGTAIWD
CCHHCCCCHHHCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCEEECCCCCCEEEC
KNLQGVVGMAVKADQERPEAKVAFMIPTDLILQVGDLATVCRVDGRIQGAIAILENYFED
CCCCCHHHHEEECCCCCCCCEEEEEECHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHH
YTTEIRYAYNLSLPEISIPLSSGKSLDEYPGSLNEMIQNLDDRTKENYSLLERFICFLLL
HHHEEEEEEECCCCCEEEECCCCCCCHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
HLEDLKKPSELCQKLTEWLEKYSQNIEDLKAVLRKEKALKNQENFQIKQPEPYLLVAAIE
HHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEEE
KSKGFILKAWLIENPQNYTPENPQGFHSFIDEENVLMNAKGTIVSNKNTSEFNQAKNLTE
CCCCEEEEEEEECCCCCCCCCCCCHHHHHCCCCCEEEECCCCEEECCCCHHHHHHHHHHH
LLQFFWADVSERYDFNLEKIAIFLPYKLIDRDIKPVDQYISDPNIPEYFQTLLGEQCEIT
HHHHHHHHHHHHCCCCHHHEEEEECHHHHCCCCHHHHHHCCCCCCHHHHHHHCCCCEEEE
LRFSERLRLSGNSNAELNKFNQKWRSLTSRQSARVIDIFHPSATSGNRKKFFRQIFADDV
EEEECEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
AAVRLTEVLQPEKRESVMEAFYYAGIPVALWMRPEAENIDCAEELQNICNACNSLSNLPK
HHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCHH
AIKAKRSEAWEQDIDRHIGNHLSLLWEDPDIVPPVNELRMLES
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA