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The map label for this gene is yjcF [C]

Identifier: 113474437

GI number: 113474437

Start: 931529

End: 932113

Strand: Reverse

Name: yjcF [C]

Synonym: Tery_0580

Alternate gene names: 113474437

Gene position: 932113-931529 (Counterclockwise)

Preceding gene: 113474440

Following gene: 113474433

Centisome position: 12.03

GC content: 37.09

Gene sequence:

>585_bases
ATGGAAGTTGAACGGTTGTTAGAACGTTATGCTGCCGGAGAACGAAATTTTCGAGATACTGATTTATTTCGAGCTAACCT
TAATAATGTTAGTTTAGCTGGTGTAAATTTGTTTCGTGCTAACTTGTTCCGAGCTAATCTATTTAGAGCGAATTTGATTG
GTATTAATCTGTATAATTCTACTTTGATAGGTGCTAATTTATATGGTGCAAATTTGAGTGGTGCAAATTTGAGTGGTGCT
AACCTAACTCGTGCAAATTTAACTGGTGCAGATTTAAGTGGGGCTGACTTAAGTGCTGCAGATTTGAGTGGGGCAATTTT
AAGTTATGCTCATCTCAGTTATGCTGACATGAGTCGTACTAATTTACATAAAGCAACTTTAATTGGTACTAATTTGAGTG
GTGCCAATTTAAGTGGTGCTGACCTCAGAGATATAAAGATAACTAAAGTGAATGTGACTGAGACAAAATTTGCTCTTGCT
ATCGGTTTGTCCAAGGATATGAAGCTAGAGCTGCACCAGCAAGGAGCTAGAGTTGAGGATATGCCAAAAGAACTCTATGC
CAGTAAATTGTTAAGTCGAATTTAA

Upstream 100 bases:

>100_bases
ATGGTTAATATAAGTCTTTTGTTTTTAAAGTTTGAAATAAGAGAAGTCTATTTCAAATATTAAGGTAAAAACTTGAATAA
AATATTAAGAGAAAAAAATT

Downstream 100 bases:

>100_bases
AGTCAATACGGTTCAGTTAAGAATTTGTTTATAGATTTTTTTAGGGTGGGTTAGAAAGCAAAAATTATTCGTTTTACTTT
CTATTCCCCATTCCCTAGAG

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MEVERLLERYAAGERNFRDTDLFRANLNNVSLAGVNLFRANLFRANLFRANLIGINLYNSTLIGANLYGANLSGANLSGA
NLTRANLTGADLSGADLSAADLSGAILSYAHLSYADMSRTNLHKATLIGTNLSGANLSGADLRDIKITKVNVTETKFALA
IGLSKDMKLELHQQGARVEDMPKELYASKLLSRI

Sequences:

>Translated_194_residues
MEVERLLERYAAGERNFRDTDLFRANLNNVSLAGVNLFRANLFRANLFRANLIGINLYNSTLIGANLYGANLSGANLSGA
NLTRANLTGADLSGADLSAADLSGAILSYAHLSYADMSRTNLHKATLIGTNLSGANLSGADLRDIKITKVNVTETKFALA
IGLSKDMKLELHQQGARVEDMPKELYASKLLSRI
>Mature_194_residues
MEVERLLERYAAGERNFRDTDLFRANLNNVSLAGVNLFRANLFRANLFRANLIGINLYNSTLIGANLYGANLSGANLSGA
NLTRANLTGADLSGADLSAADLSGAILSYAHLSYADMSRTNLHKATLIGTNLSGANLSGADLRDIKITKVNVTETKFALA
IGLSKDMKLELHQQGARVEDMPKELYASKLLSRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=152, Percent_Identity=37.5, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI221377802, Length=146, Percent_Identity=34.9315068493151, Blast_Score=82, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 20946; Mature: 20946

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVERLLERYAAGERNFRDTDLFRANLNNVSLAGVNLFRANLFRANLFRANLIGINLYNS
CCHHHHHHHHHCCCCCCCCCHHEEECCCCEEEEHHHHHHHHHHHHHEEEEEEEEEEEECC
TLIGANLYGANLSGANLSGANLTRANLTGADLSGADLSAADLSGAILSYAHLSYADMSRT
EEEECEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
NLHKATLIGTNLSGANLSGADLRDIKITKVNVTETKFALAIGLSKDMKLELHQQGARVED
CCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEHHCCCCCHH
MPKELYASKLLSRI
HHHHHHHHHHHHCC
>Mature Secondary Structure
MEVERLLERYAAGERNFRDTDLFRANLNNVSLAGVNLFRANLFRANLFRANLIGINLYNS
CCHHHHHHHHHCCCCCCCCCHHEEECCCCEEEEHHHHHHHHHHHHHEEEEEEEEEEEECC
TLIGANLYGANLSGANLSGANLTRANLTGADLSGADLSAADLSGAILSYAHLSYADMSRT
EEEECEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
NLHKATLIGTNLSGANLSGADLRDIKITKVNVTETKFALAIGLSKDMKLELHQQGARVED
CCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEHHCCCCCHH
MPKELYASKLLSRI
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA