| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474362
Identifier: 113474362
GI number: 113474362
Start: 791975
End: 793528
Strand: Direct
Name: 113474362
Synonym: Tery_0494
Alternate gene names: NA
Gene position: 791975-793528 (Clockwise)
Preceding gene: 113474361
Following gene: 113474364
Centisome position: 10.22
GC content: 36.04
Gene sequence:
>1554_bases ATGTCTTTAACAGAAAAAATTCTCGACCAAATTCCAGGAAACCCTTTAGAAGGTCTGCGACGAGTCGATCAGATTTGGCA AAAACTTCGTTCAGAAAGTATAATTATTCCTAGTACTATTAGTGAAGAAAATAAACCACTAAAAGAAGATGAATGGGATG TAGTAATTTGCGGAGGTACTCTTGGTATAATAATTGGTGCTGCTTTGGCAAAAAAAGGTTGGCGGGTTGCACTGTTAGAA CAAGGTATTCTTAAGGGTAGAAAACAAGAATGGAATATTTCTCGCAAAGAACTAGAAACATTTGTAGAATTAAACCTTGT ATCTCAAGAAGAACTAGAAAAAGCGATCGCTACGGAATATAACCCTGCTCGAATTAGCTTCCCAAATAGTCCTGAAATAT GGGTCAAAGATGTCCTCAATATTGGTGTAGATCCAGTTTATCTTTTAGAAACTCTGAAACAATGCTTTTTAGAAGCAGGG GGTCAACTATTTGAAAATACATCTTATGAAGCAGCAGTAATTCATCCAGATGGGGTAAATATCCAAACTAGCAATGGTAG ATCATTCAAAACTCGACTACTTCTGGATGCAATGGGTCATTTTTCTCCTATTGTCAAACAAGCAAGGGAAGGCAAAAAAC CTGATGCTGTTTGTTTAGTGGTTGGTACTTGCGCTACTGGATACCCAAAAAATGATACGGGGGATATTTTTGCCTCGTTT ACTCCGATCAAAAATCAATGTCAATATTTTTGGGAAGCATTTCCTGCTAGAGATGGACGAACTACTTATCTATTTACTTA TTTAGATGCTCATCGAGATAGATTTTCTTTGGAATTTTTCTTTGAAGAATATCTACGTCTATTACCTGAATATCAAAAAG TTGAACTTAGTCAACTTAAATTTCAACGTGCTTTATTTGGTTTTTTTCCTTGTTATCGTCAAAGTCCCTTGAAAACCCCT TGGAATCGTATTTTGCCAGTGGGTGATAGTAGTGGAAGTCAGTCTCCTCTTAGTTTTGGTGGTTTTGGCTCTATGGTACG TCATTTGAAACGTCTGATGGTGGGTATTGATGAAGCTTTGCAAACTGAAAATTTGTCTGCAAATGCTCTGGGACTTTTAC AACCGTATCAACCTAATGTATCAGTTACTTGGCTGTTTCAACGTTCTATGAGTATAGGGGTAAATCAATTTGTTGAACCA CATCAAATTAATGAATTATTGGCAGGGGTGTTTCAGGTAATGGAAAAATTGGGTGAACCTGTACTGAAACCTTTTTTGCA AGATGTTGTACAGTTTCCTGCTTTGGCGCAAACTTTATTTGTTACTTCTTTAAAGCAACCAGGTTTAGTAATAAAAATTA TCCCTCAAGTGGGAATAGGAAATTTGTTAAATTGGATGAAACATTATTTAAATTTGGGAGTATACAGTTTTTTATATCCT ATTGGGGGAGTTATGGAAGGTTTAACGGCAAAAATGTCAGAAGAACAAAGGTATTATTATAACCGTTGGATTGAACAATG GAAATATGGTTCAGGAGGAGATTATATTGAGTGA
Upstream 100 bases:
>100_bases GAAATCATTATAGGATTTTAGGTATATGATTATAATTAACTTATAAATTAATAGATAAAAAAAATCAATAATTACGACAA AAGTTAATAATAGAAAAGTT
Downstream 100 bases:
>100_bases CTTATCTACACAAACCTATCCGTTTTCTGTATAGGCTTCTGATGCTTTTTAAGATTTAATGTTGCAGGGTGTTTCATATT AGTTGAAGATACACCCGCAA
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 517; Mature: 516
Protein sequence:
>517_residues MSLTEKILDQIPGNPLEGLRRVDQIWQKLRSESIIIPSTISEENKPLKEDEWDVVICGGTLGIIIGAALAKKGWRVALLE QGILKGRKQEWNISRKELETFVELNLVSQEELEKAIATEYNPARISFPNSPEIWVKDVLNIGVDPVYLLETLKQCFLEAG GQLFENTSYEAAVIHPDGVNIQTSNGRSFKTRLLLDAMGHFSPIVKQAREGKKPDAVCLVVGTCATGYPKNDTGDIFASF TPIKNQCQYFWEAFPARDGRTTYLFTYLDAHRDRFSLEFFFEEYLRLLPEYQKVELSQLKFQRALFGFFPCYRQSPLKTP WNRILPVGDSSGSQSPLSFGGFGSMVRHLKRLMVGIDEALQTENLSANALGLLQPYQPNVSVTWLFQRSMSIGVNQFVEP HQINELLAGVFQVMEKLGEPVLKPFLQDVVQFPALAQTLFVTSLKQPGLVIKIIPQVGIGNLLNWMKHYLNLGVYSFLYP IGGVMEGLTAKMSEEQRYYYNRWIEQWKYGSGGDYIE
Sequences:
>Translated_517_residues MSLTEKILDQIPGNPLEGLRRVDQIWQKLRSESIIIPSTISEENKPLKEDEWDVVICGGTLGIIIGAALAKKGWRVALLE QGILKGRKQEWNISRKELETFVELNLVSQEELEKAIATEYNPARISFPNSPEIWVKDVLNIGVDPVYLLETLKQCFLEAG GQLFENTSYEAAVIHPDGVNIQTSNGRSFKTRLLLDAMGHFSPIVKQAREGKKPDAVCLVVGTCATGYPKNDTGDIFASF TPIKNQCQYFWEAFPARDGRTTYLFTYLDAHRDRFSLEFFFEEYLRLLPEYQKVELSQLKFQRALFGFFPCYRQSPLKTP WNRILPVGDSSGSQSPLSFGGFGSMVRHLKRLMVGIDEALQTENLSANALGLLQPYQPNVSVTWLFQRSMSIGVNQFVEP HQINELLAGVFQVMEKLGEPVLKPFLQDVVQFPALAQTLFVTSLKQPGLVIKIIPQVGIGNLLNWMKHYLNLGVYSFLYP IGGVMEGLTAKMSEEQRYYYNRWIEQWKYGSGGDYIE >Mature_516_residues SLTEKILDQIPGNPLEGLRRVDQIWQKLRSESIIIPSTISEENKPLKEDEWDVVICGGTLGIIIGAALAKKGWRVALLEQ GILKGRKQEWNISRKELETFVELNLVSQEELEKAIATEYNPARISFPNSPEIWVKDVLNIGVDPVYLLETLKQCFLEAGG QLFENTSYEAAVIHPDGVNIQTSNGRSFKTRLLLDAMGHFSPIVKQAREGKKPDAVCLVVGTCATGYPKNDTGDIFASFT PIKNQCQYFWEAFPARDGRTTYLFTYLDAHRDRFSLEFFFEEYLRLLPEYQKVELSQLKFQRALFGFFPCYRQSPLKTPW NRILPVGDSSGSQSPLSFGGFGSMVRHLKRLMVGIDEALQTENLSANALGLLQPYQPNVSVTWLFQRSMSIGVNQFVEPH QINELLAGVFQVMEKLGEPVLKPFLQDVVQFPALAQTLFVTSLKQPGLVIKIIPQVGIGNLLNWMKHYLNLGVYSFLYPI GGVMEGLTAKMSEEQRYYYNRWIEQWKYGSGGDYIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58631; Mature: 58500
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTEKILDQIPGNPLEGLRRVDQIWQKLRSESIIIPSTISEENKPLKEDEWDVVICGGT CCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEECCH LGIIIGAALAKKGWRVALLEQGILKGRKQEWNISRKELETFVELNLVSQEELEKAIATEY HHHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC NPARISFPNSPEIWVKDVLNIGVDPVYLLETLKQCFLEAGGQLFENTSYEAAVIHPDGVN CCCEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCEEEECCCCCE IQTSNGRSFKTRLLLDAMGHFSPIVKQAREGKKPDAVCLVVGTCATGYPKNDTGDIFASF EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEEC TPIKNQCQYFWEAFPARDGRTTYLFTYLDAHRDRFSLEFFFEEYLRLLPEYQKVELSQLK CCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH FQRALFGFFPCYRQSPLKTPWNRILPVGDSSGSQSPLSFGGFGSMVRHLKRLMVGIDEAL HHHHHHHHHHHHCCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH QTENLSANALGLLQPYQPNVSVTWLFQRSMSIGVNQFVEPHQINELLAGVFQVMEKLGEP HHCCCCCCCEECCCCCCCCCEEEEEEHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHCCH VLKPFLQDVVQFPALAQTLFVTSLKQPGLVIKIIPQVGIGNLLNWMKHYLNLGVYSFLYP HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH IGGVMEGLTAKMSEEQRYYYNRWIEQWKYGSGGDYIE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SLTEKILDQIPGNPLEGLRRVDQIWQKLRSESIIIPSTISEENKPLKEDEWDVVICGGT CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEECCH LGIIIGAALAKKGWRVALLEQGILKGRKQEWNISRKELETFVELNLVSQEELEKAIATEY HHHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC NPARISFPNSPEIWVKDVLNIGVDPVYLLETLKQCFLEAGGQLFENTSYEAAVIHPDGVN CCCEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCEEEECCCCCE IQTSNGRSFKTRLLLDAMGHFSPIVKQAREGKKPDAVCLVVGTCATGYPKNDTGDIFASF EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEEC TPIKNQCQYFWEAFPARDGRTTYLFTYLDAHRDRFSLEFFFEEYLRLLPEYQKVELSQLK CCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH FQRALFGFFPCYRQSPLKTPWNRILPVGDSSGSQSPLSFGGFGSMVRHLKRLMVGIDEAL HHHHHHHHHHHHCCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH QTENLSANALGLLQPYQPNVSVTWLFQRSMSIGVNQFVEPHQINELLAGVFQVMEKLGEP HHCCCCCCCEECCCCCCCCCEEEEEEHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHCCH VLKPFLQDVVQFPALAQTLFVTSLKQPGLVIKIIPQVGIGNLLNWMKHYLNLGVYSFLYP HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH IGGVMEGLTAKMSEEQRYYYNRWIEQWKYGSGGDYIE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA