The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474353

Identifier: 113474353

GI number: 113474353

Start: 775464

End: 778196

Strand: Reverse

Name: 113474353

Synonym: Tery_0485

Alternate gene names: NA

Gene position: 778196-775464 (Counterclockwise)

Preceding gene: 113474363

Following gene: 113474352

Centisome position: 10.04

GC content: 39.19

Gene sequence:

>2733_bases
GTGGCAGTAGCATTAGAGAGTTTACTTACACCCCATATCCACAAACCAGCTCGTTACCTTGGTAATGAGTTTGGTGCTTT
TCATAAGCCTTGGGACAGTTCTCAAGTGCGCTGGGTATTGAGTTACCCAGAAGTTTATGAAGTAGGAGCTTCTAATTTAG
GACATATAATTCTTTACAATATCTTGAATTCTCAGCCACGACAACTATGTGATCGCGCATATTTACCAGCTCCAGATTTA
GCAGAAAAATTGCGGGCCACAGAAACTCCACTATTTGCTGTAGAATCAAGGCAATCATTGATTCATTTCGATATTCTAGG
CTTTAATCTTAGCTATGAATTAGGAGCGACAAATATTCTAGAGATGCTAAGTTTGGCTGGTATCCCATTAACTTGGCAAG
AACGGCTTAAACTAGGGAATAGAGATGAAGACAAATTTCCTTTAATTTTTGCAGGTGGCCAAACAGCAACTTCTAACCCT
GAACCTTATGCAGACTTTTTTGACTTTATTGCTTTAGGAGATGGAGAAGAGTTACTTCCAGAAATTGGACTAATAGTTGA
CGAGGGTAAGAAGGGTAGATTAACCAGAGAAGAATTACTTTTGGACTTAGCCCAAATTCCCGGTGTTTATGTGCCACAAT
TTTATAGCATGGCTGAAGATGGCTCAGTCTTCCCAACTCGTCATGATGTGCCAAGAACGATACTGCGTCGAGTTGCAACT
CCTATGCCGGCTTATTCTATAGGTTTGGTTCCTTATGTAGAAACAGTCCATGATCGACTGGTAATAGAAGTTCGACGTGG
TTGCACTAGAGGTTGTCGCTTTTGTCAACCAGGTATGTTAACTAGACCAGCACGAGATGTGGAACCAGAACAAGTAGTGG
ATACTATTGAAAAAGGTATAACTGCAACTGGACATAATGAGTTCTCTTTACTTTCCTTGAGTTGTTCTGATTATTTGGCT
TTACCAGCAGTGGGAACTGAAATTAGAAACCGTTTCCAGGATGAAAATATTTCTTTATCTCTACCAAGTCAGCGAGTAGA
TAGATTTGATAAAAATATTGCCAATATTATTGGTGGTGGTCACCAAAGTAGTTTGACATTTGCTCCAGAAGCAGGTACCC
AACGAATGCGGGACATTGTAAATAAGGGATTGACAAATGAGGAACTTTTACGGGGAGTAAAAACTGCTTATGACCAAGGT
TGGGATAAAGTTAAGCTCTATTTTATGATTGGTTTGCCTGGAGAAACTGATGCTGATGTGTTAGGTATCGCCGAAACAGT
TAATTGGTTGCAGCAAGAATGCCGAGCTAAAGGTCGGAGAAAGCTACAGGTTACTTTAACAATTTCTAATTTTACCCCGA
AGCCTCATACTCCTTTTCAATGGCATTCGGTTTCTGTGACTGAGTTTGAACGTAAGCAAGAATTGCTAAAGGCAGAATTT
CGGAGGATGAAAGGTGTAAAAGCCAATTTTACCGATGTCCGTCTCTCAGCAATGGAGGATTTTCTGGGTAGAGGCGATCG
CCGTTTAGCATCTGTAATTCTGCGTGCTTGGGAACGAGGCGCTGGCATGGACTCTTGGTGGGAAAGTTTGGATAGAGCTT
TTGCTGCATGGAGTGATGCTATTGCAGAATCAGACTTGAGTTGGAAGTACCGTCAAGTAGAAAAGGGTGAGTGGAATGTA
TTTTCAAATACAGAAGAAAATTTTAATATATGGAATGAAGACCAAGTCAATTCCCGACTTAACCAACCCCTACCTTGGGA
TCATATAGATACTGGAATTGATAAAAATTGGCTCAAAGAAGATTTGCACAAAGCTTTGGCAGAAGTAACTGTTCCTGATT
GCTCCTTTGGGACTTGTTCTCATTGTGGTGTTTGTGGTCCAGATCTAGGTCATAATATTGTTATTCCACCACCACCAATT
CCCAAGTTTGTAGGTCAGTTTGTCCCTAATCAAAATCGGGTACAACGTCTACGAGTTTGGTTTGGGAAATTAGGAGAAAT
GGCCTTAGTAAGTCATCTAGATTTAGCGAGGTTATTTGCTCGTATTGTTCGTCGGAGTAATATACCTATTGCCTTTAGCG
GAGGATATCATCCAAGTCCACGAATTGTTCTAGCTAGTGCTTTATCTCTAGGAGTAACTAGTACAGGAGAAGTAGTGGAT
TTTGAGTTGACAGAAACAATAGATGTGTTAGGATTTCAGAAGAAGCTAGAGAGTCAATTGCCAGTTGGTATACCTATATA
TAAGGTAGAAGAGGTAGAAGTTAAGAGTCCTTCTTTATCTCAGACATTGGAGAAAGCAGAGTATATTTTGAGGGTCAGTA
AAACTAATGATTCTACAAAAGATTTGATACAAGACTGCAATACTATAAGAGAAGTTGAGGAAAATGACTGTTCTAACCTA
AATTGGCAAGGGTGGGTAGAGGCAATTAAAAATAGGGAATTAATTCTTTGGGAACAAAAAACAAAGTCGGGTAAGGTCAA
AGTTATTAACTTACGTGATCGTTTATTTGAATTGGAGTTTTTAGAGTATCCAACAACCTTAAATTTTTGCATACCTTGGT
CTTATGAGTCTAATTCGTATTATGAAACTGATGCCATTATTCGTTATGTAGGAAGCTATCAGAATGATGGAACTTTACTA
AGACCACAAAATATAATTTATATGCTGAAAGAAGTCAGTAAGCTAGAGTTTGAATTGGTATATACTCATAGGCAAAAGTT
GTTTTTGAGGTAA

Upstream 100 bases:

>100_bases
GCCAAAATGAGGAAGGTCTATGAATTCTAGTTTAACACCATAAGTTTTGGTGCTATCTTGATAATATGTATAACTTAAAA
ATATACCTTAAATACTAATA

Downstream 100 bases:

>100_bases
TAAAATTTAATGTTAATGGAAACCTATTAAGAGGGTATCTATAAGTAAAACATTAAATTATGGTATGGGGTGAGTATCAA
AAGCGCAAAAAGAAAGGGCA

Product: radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 910; Mature: 909

Protein sequence:

>910_residues
MAVALESLLTPHIHKPARYLGNEFGAFHKPWDSSQVRWVLSYPEVYEVGASNLGHIILYNILNSQPRQLCDRAYLPAPDL
AEKLRATETPLFAVESRQSLIHFDILGFNLSYELGATNILEMLSLAGIPLTWQERLKLGNRDEDKFPLIFAGGQTATSNP
EPYADFFDFIALGDGEELLPEIGLIVDEGKKGRLTREELLLDLAQIPGVYVPQFYSMAEDGSVFPTRHDVPRTILRRVAT
PMPAYSIGLVPYVETVHDRLVIEVRRGCTRGCRFCQPGMLTRPARDVEPEQVVDTIEKGITATGHNEFSLLSLSCSDYLA
LPAVGTEIRNRFQDENISLSLPSQRVDRFDKNIANIIGGGHQSSLTFAPEAGTQRMRDIVNKGLTNEELLRGVKTAYDQG
WDKVKLYFMIGLPGETDADVLGIAETVNWLQQECRAKGRRKLQVTLTISNFTPKPHTPFQWHSVSVTEFERKQELLKAEF
RRMKGVKANFTDVRLSAMEDFLGRGDRRLASVILRAWERGAGMDSWWESLDRAFAAWSDAIAESDLSWKYRQVEKGEWNV
FSNTEENFNIWNEDQVNSRLNQPLPWDHIDTGIDKNWLKEDLHKALAEVTVPDCSFGTCSHCGVCGPDLGHNIVIPPPPI
PKFVGQFVPNQNRVQRLRVWFGKLGEMALVSHLDLARLFARIVRRSNIPIAFSGGYHPSPRIVLASALSLGVTSTGEVVD
FELTETIDVLGFQKKLESQLPVGIPIYKVEEVEVKSPSLSQTLEKAEYILRVSKTNDSTKDLIQDCNTIREVEENDCSNL
NWQGWVEAIKNRELILWEQKTKSGKVKVINLRDRLFELEFLEYPTTLNFCIPWSYESNSYYETDAIIRYVGSYQNDGTLL
RPQNIIYMLKEVSKLEFELVYTHRQKLFLR

Sequences:

>Translated_910_residues
MAVALESLLTPHIHKPARYLGNEFGAFHKPWDSSQVRWVLSYPEVYEVGASNLGHIILYNILNSQPRQLCDRAYLPAPDL
AEKLRATETPLFAVESRQSLIHFDILGFNLSYELGATNILEMLSLAGIPLTWQERLKLGNRDEDKFPLIFAGGQTATSNP
EPYADFFDFIALGDGEELLPEIGLIVDEGKKGRLTREELLLDLAQIPGVYVPQFYSMAEDGSVFPTRHDVPRTILRRVAT
PMPAYSIGLVPYVETVHDRLVIEVRRGCTRGCRFCQPGMLTRPARDVEPEQVVDTIEKGITATGHNEFSLLSLSCSDYLA
LPAVGTEIRNRFQDENISLSLPSQRVDRFDKNIANIIGGGHQSSLTFAPEAGTQRMRDIVNKGLTNEELLRGVKTAYDQG
WDKVKLYFMIGLPGETDADVLGIAETVNWLQQECRAKGRRKLQVTLTISNFTPKPHTPFQWHSVSVTEFERKQELLKAEF
RRMKGVKANFTDVRLSAMEDFLGRGDRRLASVILRAWERGAGMDSWWESLDRAFAAWSDAIAESDLSWKYRQVEKGEWNV
FSNTEENFNIWNEDQVNSRLNQPLPWDHIDTGIDKNWLKEDLHKALAEVTVPDCSFGTCSHCGVCGPDLGHNIVIPPPPI
PKFVGQFVPNQNRVQRLRVWFGKLGEMALVSHLDLARLFARIVRRSNIPIAFSGGYHPSPRIVLASALSLGVTSTGEVVD
FELTETIDVLGFQKKLESQLPVGIPIYKVEEVEVKSPSLSQTLEKAEYILRVSKTNDSTKDLIQDCNTIREVEENDCSNL
NWQGWVEAIKNRELILWEQKTKSGKVKVINLRDRLFELEFLEYPTTLNFCIPWSYESNSYYETDAIIRYVGSYQNDGTLL
RPQNIIYMLKEVSKLEFELVYTHRQKLFLR
>Mature_909_residues
AVALESLLTPHIHKPARYLGNEFGAFHKPWDSSQVRWVLSYPEVYEVGASNLGHIILYNILNSQPRQLCDRAYLPAPDLA
EKLRATETPLFAVESRQSLIHFDILGFNLSYELGATNILEMLSLAGIPLTWQERLKLGNRDEDKFPLIFAGGQTATSNPE
PYADFFDFIALGDGEELLPEIGLIVDEGKKGRLTREELLLDLAQIPGVYVPQFYSMAEDGSVFPTRHDVPRTILRRVATP
MPAYSIGLVPYVETVHDRLVIEVRRGCTRGCRFCQPGMLTRPARDVEPEQVVDTIEKGITATGHNEFSLLSLSCSDYLAL
PAVGTEIRNRFQDENISLSLPSQRVDRFDKNIANIIGGGHQSSLTFAPEAGTQRMRDIVNKGLTNEELLRGVKTAYDQGW
DKVKLYFMIGLPGETDADVLGIAETVNWLQQECRAKGRRKLQVTLTISNFTPKPHTPFQWHSVSVTEFERKQELLKAEFR
RMKGVKANFTDVRLSAMEDFLGRGDRRLASVILRAWERGAGMDSWWESLDRAFAAWSDAIAESDLSWKYRQVEKGEWNVF
SNTEENFNIWNEDQVNSRLNQPLPWDHIDTGIDKNWLKEDLHKALAEVTVPDCSFGTCSHCGVCGPDLGHNIVIPPPPIP
KFVGQFVPNQNRVQRLRVWFGKLGEMALVSHLDLARLFARIVRRSNIPIAFSGGYHPSPRIVLASALSLGVTSTGEVVDF
ELTETIDVLGFQKKLESQLPVGIPIYKVEEVEVKSPSLSQTLEKAEYILRVSKTNDSTKDLIQDCNTIREVEENDCSNLN
WQGWVEAIKNRELILWEQKTKSGKVKVINLRDRLFELEFLEYPTTLNFCIPWSYESNSYYETDAIIRYVGSYQNDGTLLR
PQNIIYMLKEVSKLEFELVYTHRQKLFLR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 103377; Mature: 103246

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVALESLLTPHIHKPARYLGNEFGAFHKPWDSSQVRWVLSYPEVYEVGASNLGHIILYN
CCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCEEEEH
ILNSQPRQLCDRAYLPAPDLAEKLRATETPLFAVESRQSLIHFDILGFNLSYELGATNIL
HHCCCHHHHHHHCCCCCCHHHHHHHHCCCCEEEECCCCCEEEEEEEEEEEEECCCHHHHH
EMLSLAGIPLTWQERLKLGNRDEDKFPLIFAGGQTATSNPEPYADFFDFIALGDGEELLP
HHHHHCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHHH
EIGLIVDEGKKGRLTREELLLDLAQIPGVYVPQFYSMAEDGSVFPTRHDVPRTILRRVAT
HHCEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCC
PMPAYSIGLVPYVETVHDRLVIEVRRGCTRGCRFCQPGMLTRPARDVEPEQVVDTIEKGI
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
TATGHNEFSLLSLSCSDYLALPAVGTEIRNRFQDENISLSLPSQRVDRFDKNIANIIGGG
EECCCCCEEEEEECCCCCEECCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCC
HQSSLTFAPEAGTQRMRDIVNKGLTNEELLRGVKTAYDQGWDKVKLYFMIGLPGETDADV
CCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHH
LGIAETVNWLQQECRAKGRRKLQVTLTISNFTPKPHTPFQWHSVSVTEFERKQELLKAEF
HHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCEECCCHHHHHHHHHHHHHHH
RRMKGVKANFTDVRLSAMEDFLGRGDRRLASVILRAWERGAGMDSWWESLDRAFAAWSDA
HHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IAESDLSWKYRQVEKGEWNVFSNTEENFNIWNEDQVNSRLNQPLPWDHIDTGIDKNWLKE
HHHCCCCCHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHCCCCCCCCHHHCCCCHHHHHH
DLHKALAEVTVPDCSFGTCSHCGVCGPDLGHNIVIPPPPIPKFVGQFVPNQNRVQRLRVW
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHH
FGKLGEMALVSHLDLARLFARIVRRSNIPIAFSGGYHPSPRIVLASALSLGVTSTGEVVD
HHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCEEE
FELTETIDVLGFQKKLESQLPVGIPIYKVEEVEVKSPSLSQTLEKAEYILRVSKTNDSTK
EEHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHEEEECCCCHHH
DLIQDCNTIREVEENDCSNLNWQGWVEAIKNRELILWEQKTKSGKVKVINLRDRLFELEF
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCEEEEEHHHHHHHHHH
LEYPTTLNFCIPWSYESNSYYETDAIIRYVGSYQNDGTLLRPQNIIYMLKEVSKLEFELV
HCCCCEEEEEEEECCCCCCEEHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHEEEE
YTHRQKLFLR
EEHHHHHCCC
>Mature Secondary Structure 
AVALESLLTPHIHKPARYLGNEFGAFHKPWDSSQVRWVLSYPEVYEVGASNLGHIILYN
CCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCEEEEH
ILNSQPRQLCDRAYLPAPDLAEKLRATETPLFAVESRQSLIHFDILGFNLSYELGATNIL
HHCCCHHHHHHHCCCCCCHHHHHHHHCCCCEEEECCCCCEEEEEEEEEEEEECCCHHHHH
EMLSLAGIPLTWQERLKLGNRDEDKFPLIFAGGQTATSNPEPYADFFDFIALGDGEELLP
HHHHHCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHHH
EIGLIVDEGKKGRLTREELLLDLAQIPGVYVPQFYSMAEDGSVFPTRHDVPRTILRRVAT
HHCEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCC
PMPAYSIGLVPYVETVHDRLVIEVRRGCTRGCRFCQPGMLTRPARDVEPEQVVDTIEKGI
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
TATGHNEFSLLSLSCSDYLALPAVGTEIRNRFQDENISLSLPSQRVDRFDKNIANIIGGG
EECCCCCEEEEEECCCCCEECCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCC
HQSSLTFAPEAGTQRMRDIVNKGLTNEELLRGVKTAYDQGWDKVKLYFMIGLPGETDADV
CCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHH
LGIAETVNWLQQECRAKGRRKLQVTLTISNFTPKPHTPFQWHSVSVTEFERKQELLKAEF
HHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCEECCCHHHHHHHHHHHHHHH
RRMKGVKANFTDVRLSAMEDFLGRGDRRLASVILRAWERGAGMDSWWESLDRAFAAWSDA
HHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IAESDLSWKYRQVEKGEWNVFSNTEENFNIWNEDQVNSRLNQPLPWDHIDTGIDKNWLKE
HHHCCCCCHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHCCCCCCCCHHHCCCCHHHHHH
DLHKALAEVTVPDCSFGTCSHCGVCGPDLGHNIVIPPPPIPKFVGQFVPNQNRVQRLRVW
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHH
FGKLGEMALVSHLDLARLFARIVRRSNIPIAFSGGYHPSPRIVLASALSLGVTSTGEVVD
HHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCEEE
FELTETIDVLGFQKKLESQLPVGIPIYKVEEVEVKSPSLSQTLEKAEYILRVSKTNDSTK
EEHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHEEEECCCCHHH
DLIQDCNTIREVEENDCSNLNWQGWVEAIKNRELILWEQKTKSGKVKVINLRDRLFELEF
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCEEEEEHHHHHHHHHH
LEYPTTLNFCIPWSYESNSYYETDAIIRYVGSYQNDGTLLRPQNIIYMLKEVSKLEFELV
HCCCCEEEEEEEECCCCCCEEHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHEEEE
YTHRQKLFLR
EEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]