Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113474294
Identifier: 113474294
GI number: 113474294
Start: 663633
End: 663986
Strand: Direct
Name: 113474294
Synonym: Tery_0420
Alternate gene names: NA
Gene position: 663633-663986 (Clockwise)
Preceding gene: 113474293
Following gene: 113474295
Centisome position: 8.56
GC content: 46.61
Gene sequence:
>354_bases ATGACTGTAGAATTTAAGCACGTGATGTTGATGGTAAAAGATGTACTGGCATCAGTAAAGTTTTACTCGGAAGGCTTGGG ACTAACGGTTAAAACTGCTAGTCCGGGCTGGGCAGAACTAGATGCGAACGGTACGACTATTGCTCTCCATGCAGCGGAAA ATCCACAAGGCAGTGATTCTCCGATTCTTAGTTTTCATGTAGATGATGTACAAGGGGCGATCGCAGCTTTGGAGCCGATG GGGGCTAAATTAGAGGGAAGAGTTCGGGAACCATCATTCGGGAAAGTAGCAGCAATGCGCACTCCAGATGGTTATCTAGT GAGCCTTTTGCAACCCACAAAAGTCAGTAAGTAG
Upstream 100 bases:
>100_bases CAGTTCTGGTGGAAGCAGAAAGTCAACATTAAAATATCACTATAAAGAATGTTATAATACGAAATATAATGGGTGCTAAC GCTATTTAAGGAGATAGTCA
Downstream 100 bases:
>100_bases TAATATATATCTATTTATCCTAGAAACCAGGTATATCTGAAAAACCTGGTTTCTTGATGCAAAGACTATTGCCTGCCATA ACGGTTGAAAAGTATCAGCG
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein Family
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MTVEFKHVMLMVKDVLASVKFYSEGLGLTVKTASPGWAELDANGTTIALHAAENPQGSDSPILSFHVDDVQGAIAALEPM GAKLEGRVREPSFGKVAAMRTPDGYLVSLLQPTKVSK
Sequences:
>Translated_117_residues MTVEFKHVMLMVKDVLASVKFYSEGLGLTVKTASPGWAELDANGTTIALHAAENPQGSDSPILSFHVDDVQGAIAALEPM GAKLEGRVREPSFGKVAAMRTPDGYLVSLLQPTKVSK >Mature_116_residues TVEFKHVMLMVKDVLASVKFYSEGLGLTVKTASPGWAELDANGTTIALHAAENPQGSDSPILSFHVDDVQGAIAALEPMG AKLEGRVREPSFGKVAAMRTPDGYLVSLLQPTKVSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12440; Mature: 12309
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00934 GLYOXALASE_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVEFKHVMLMVKDVLASVKFYSEGLGLTVKTASPGWAELDANGTTIALHAAENPQGSDS CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCCCCEEEEEECCCCCCCCC PILSFHVDDVQGAIAALEPMGAKLEGRVREPSFGKVAAMRTPDGYLVSLLQPTKVSK CEEEEEECCHHHHHHHHCCCCCCCCCEECCCCCCCEEEEECCCCEEEEEECCCCCCC >Mature Secondary Structure TVEFKHVMLMVKDVLASVKFYSEGLGLTVKTASPGWAELDANGTTIALHAAENPQGSDS CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCCCCEEEEEECCCCCCCCC PILSFHVDDVQGAIAALEPMGAKLEGRVREPSFGKVAAMRTPDGYLVSLLQPTKVSK CEEEEEECCHHHHHHHHCCCCCCCCCEECCCCCCCEEEEECCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA