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The map label for this gene is 113474265

Identifier: 113474265

GI number: 113474265

Start: 597558

End: 598646

Strand: Direct

Name: 113474265

Synonym: Tery_0385

Alternate gene names: NA

Gene position: 597558-598646 (Clockwise)

Preceding gene: 113474260

Following gene: 113474266

Centisome position: 7.71

GC content: 39.67

Gene sequence:

>1089_bases
ATGTTAAACGAACAGAAAACAACTAGAAATATTGATTCACTATTTTGGCTAGAATGGCAAAAGCATCAAGAGTATCTCTA
CCGTTGCTGTGTCAAATGGATGGGAGGTAATTCTACAAATGCTGAGGATGCTTTAAGTATGGCCATGCTCAAGGCTAGGG
AAAAAATACAACAGTCTTCCAGAAGAATTGAGAACTTAAAACCTTGGCTGGCTAAACTAACCTATAACCTTTGTATGGAT
CTACTGAAGGAGTCTGCTCGATATAATCAAGGGGTTGAGGATCTAGACTTGGTTATTTCTGGCGCTGATGGGAGCACTCA
AGGAGGAGATCCATTTTTTGTTGTTGCCTACGAAGAACTAAAAGATTTTTGTAACTTGGCCATTGATGATTTGCCAAAGA
GACTACGAGAAACTTTTGTTCTCCTTTATCAGAAACAATTCTCTTCTCAAGAAATAGCTGCAGAGTTGAATATTTCTGAC
TCTAATGTCCGTAAGCGTATTTCCCGGGGGCGGGCTATTTTGGAAAAAAGGCGCCAGAAAGAGTACGAAAAACAAGAAGA
AATAGTTATTGTGGAGAATCAAAAAATAGAAAGTTCCCAACCTCAAGAGTTGGATACAGAAATTGTTACTGCTGAGATAC
CCCAAGAGACTATTTTATCTGAAGAGAAAAGTGAGCCTATTTTAGTTGAGGCCACGGTTGAGGAGGAGTTACGGGAAATA
GAGACTTTTGGCAATGGAGGACAGCAGCTCTTTGCTCTATCTGTATTGTTGAAATTACTTAGGGTAGAGAATAAAAAGCC
CAAGGGTGAGAAACAACAAAAATGTGGTCTACTTAGTAGATGCACAAATATAGGACTGGCATTGCTGAGGGGCAGGATGA
ATATAAGTGGAGTCCGCATCCTGCTAACCCAAAAATATAAGAAACGGCTCAAATGGCTCACCCACAAAGTGATAGAGGCT
CAACCACATTATTTATACAATTTTGGCAAGGGGGAACTAAAAGCTTTAGAAAAACAGTTGAATTGGTTAATAATGGAGAA
TTTCCTAGGGCCTTCAGCAGCAAAACTGGTATATAAAGACTGCTGCTAG

Upstream 100 bases:

>100_bases
TGTTTTTTAGGGAAAAATCAAGTATTATTAAGCTACTTTAAAAATCAGAAAGTCTGGCAATTTTAAAAAAAACTAGTGTA
TCTAACAATAATTTTTTGTA

Downstream 100 bases:

>100_bases
TGGGCTTTTTCGCAGCTAAAGCCATTGTTGTTGAGCCACTCTTAAGTTCATAGTTGAGCGATCGCTATTTGTGGTCAAAA
GCAGGCCTCTAGGATACCTT

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma Factor Sigma-70 Family

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MLNEQKTTRNIDSLFWLEWQKHQEYLYRCCVKWMGGNSTNAEDALSMAMLKAREKIQQSSRRIENLKPWLAKLTYNLCMD
LLKESARYNQGVEDLDLVISGADGSTQGGDPFFVVAYEELKDFCNLAIDDLPKRLRETFVLLYQKQFSSQEIAAELNISD
SNVRKRISRGRAILEKRRQKEYEKQEEIVIVENQKIESSQPQELDTEIVTAEIPQETILSEEKSEPILVEATVEEELREI
ETFGNGGQQLFALSVLLKLLRVENKKPKGEKQQKCGLLSRCTNIGLALLRGRMNISGVRILLTQKYKKRLKWLTHKVIEA
QPHYLYNFGKGELKALEKQLNWLIMENFLGPSAAKLVYKDCC

Sequences:

>Translated_362_residues
MLNEQKTTRNIDSLFWLEWQKHQEYLYRCCVKWMGGNSTNAEDALSMAMLKAREKIQQSSRRIENLKPWLAKLTYNLCMD
LLKESARYNQGVEDLDLVISGADGSTQGGDPFFVVAYEELKDFCNLAIDDLPKRLRETFVLLYQKQFSSQEIAAELNISD
SNVRKRISRGRAILEKRRQKEYEKQEEIVIVENQKIESSQPQELDTEIVTAEIPQETILSEEKSEPILVEATVEEELREI
ETFGNGGQQLFALSVLLKLLRVENKKPKGEKQQKCGLLSRCTNIGLALLRGRMNISGVRILLTQKYKKRLKWLTHKVIEA
QPHYLYNFGKGELKALEKQLNWLIMENFLGPSAAKLVYKDCC
>Mature_362_residues
MLNEQKTTRNIDSLFWLEWQKHQEYLYRCCVKWMGGNSTNAEDALSMAMLKAREKIQQSSRRIENLKPWLAKLTYNLCMD
LLKESARYNQGVEDLDLVISGADGSTQGGDPFFVVAYEELKDFCNLAIDDLPKRLRETFVLLYQKQFSSQEIAAELNISD
SNVRKRISRGRAILEKRRQKEYEKQEEIVIVENQKIESSQPQELDTEIVTAEIPQETILSEEKSEPILVEATVEEELREI
ETFGNGGQQLFALSVLLKLLRVENKKPKGEKQQKCGLLSRCTNIGLALLRGRMNISGVRILLTQKYKKRLKWLTHKVIEA
QPHYLYNFGKGELKALEKQLNWLIMENFLGPSAAKLVYKDCC

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41830; Mature: 41830

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNEQKTTRNIDSLFWLEWQKHQEYLYRCCVKWMGGNSTNAEDALSMAMLKAREKIQQSS
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
RRIENLKPWLAKLTYNLCMDLLKESARYNQGVEDLDLVISGADGSTQGGDPFFVVAYEEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEHHHH
KDFCNLAIDDLPKRLRETFVLLYQKQFSSQEIAAELNISDSNVRKRISRGRAILEKRRQK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCHHHHHHHHHHHHHHHHHHHHH
EYEKQEEIVIVENQKIESSQPQELDTEIVTAEIPQETILSEEKSEPILVEATVEEELREI
HHHHHCCEEEEECCCCCCCCCCHHCHHHHHHCCCHHHHHCCCCCCCEEEEEHHHHHHHHH
ETFGNGGQQLFALSVLLKLLRVENKKPKGEKQQKCGLLSRCTNIGLALLRGRMNISGVRI
HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LLTQKYKKRLKWLTHKVIEAQPHYLYNFGKGELKALEKQLNWLIMENFLGPSAAKLVYKD
HHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
CC
CC
>Mature Secondary Structure
MLNEQKTTRNIDSLFWLEWQKHQEYLYRCCVKWMGGNSTNAEDALSMAMLKAREKIQQSS
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
RRIENLKPWLAKLTYNLCMDLLKESARYNQGVEDLDLVISGADGSTQGGDPFFVVAYEEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEHHHH
KDFCNLAIDDLPKRLRETFVLLYQKQFSSQEIAAELNISDSNVRKRISRGRAILEKRRQK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCHHHHHHHHHHHHHHHHHHHHH
EYEKQEEIVIVENQKIESSQPQELDTEIVTAEIPQETILSEEKSEPILVEATVEEELREI
HHHHHCCEEEEECCCCCCCCCCHHCHHHHHHCCCHHHHHCCCCCCCEEEEEHHHHHHHHH
ETFGNGGQQLFALSVLLKLLRVENKKPKGEKQQKCGLLSRCTNIGLALLRGRMNISGVRI
HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LLTQKYKKRLKWLTHKVIEAQPHYLYNFGKGELKALEKQLNWLIMENFLGPSAAKLVYKD
HHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
CC
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA