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The map label for this gene is yfiC [C]

Identifier: 113474212

GI number: 113474212

Start: 500956

End: 501675

Strand: Direct

Name: yfiC [C]

Synonym: Tery_0325

Alternate gene names: 113474212

Gene position: 500956-501675 (Clockwise)

Preceding gene: 113474211

Following gene: 113474213

Centisome position: 6.46

GC content: 33.61

Gene sequence:

>720_bases
ATGGGAGGAAATCAATTTAGATTTAAGCAGTTTACTATCAGACAAGATAGATGTGCTATGAAGGTGGGTACAGATGGTAC
TTTATTAGGGGCATGGGTCGATGTTTCTGGAGCAGAAAAAATTTTAGATATTGGTACAGGTACTGGTTTAATTGCTTTAA
TGCTGGCACAGCGTTCGTCTCAGCTGAAGGTTGATATTGATGCTGTAGAAATTGATATCAACTCATCTATTCAAGCTAGG
GAAAATGTGGAGCGATCGCGTTGGTCAGATAGAGTTAAAGTTGAAAATTATTCAATCCAAAAATATATAGATATTTGTCA
AAAACGTTATGATTTAATAGTCTCAAATCCACCTTTTTTTGAAAATGCTTCTAAACCTGTAAAAAAGGCAAGAACAGTTG
CCAGACATACTGACTTTCTCTCACAAGCTGATTTATTGCAGGCAGCAGTTAAGCTTTTATCTGACACTGGCAAATTAGCT
GTAATTTATCCCGTGGAACAAGCTCACAATTTTCAGGAAAAGGCAGAATATTTGGGATTATTTTGTCAGAGAAAACTTGA
TGTTAAACCTATGCCAAAAATTCCTACAAAACGAATTTTGATGGAACTCAGCAAAAAAAAATTACCATTACAAAAAAATA
CTCTGACTATTGAAGTCAAACAATATACATATACACCAGAATTTATTACCTTAATTAAAGATTTTTACCTAAAATATTGA

Upstream 100 bases:

>100_bases
GTATAGTGGCGAGGGCTACAATTGCTTCAATACAAGCAGAAATAGACTCCCATCGTATAACTAATTGAGGTGATTACTAA
TTAATAGCTATTTACAAAAT

Downstream 100 bases:

>100_bases
CTTCCTTTGTCAAGGCTATTGGTTGAACTAAAAAATTCAGGTATCAAGTCTCTCAATTCATAGAGAAAAAAATAAAAAAA
AATCTTTTTAACTAATGTTT

Product: methyltransferase small

Products: NA

Alternate protein names: tRNA m6A37 methyltransferase

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MGGNQFRFKQFTIRQDRCAMKVGTDGTLLGAWVDVSGAEKILDIGTGTGLIALMLAQRSSQLKVDIDAVEIDINSSIQAR
ENVERSRWSDRVKVENYSIQKYIDICQKRYDLIVSNPPFFENASKPVKKARTVARHTDFLSQADLLQAAVKLLSDTGKLA
VIYPVEQAHNFQEKAEYLGLFCQRKLDVKPMPKIPTKRILMELSKKKLPLQKNTLTIEVKQYTYTPEFITLIKDFYLKY

Sequences:

>Translated_239_residues
MGGNQFRFKQFTIRQDRCAMKVGTDGTLLGAWVDVSGAEKILDIGTGTGLIALMLAQRSSQLKVDIDAVEIDINSSIQAR
ENVERSRWSDRVKVENYSIQKYIDICQKRYDLIVSNPPFFENASKPVKKARTVARHTDFLSQADLLQAAVKLLSDTGKLA
VIYPVEQAHNFQEKAEYLGLFCQRKLDVKPMPKIPTKRILMELSKKKLPLQKNTLTIEVKQYTYTPEFITLIKDFYLKY
>Mature_238_residues
GGNQFRFKQFTIRQDRCAMKVGTDGTLLGAWVDVSGAEKILDIGTGTGLIALMLAQRSSQLKVDIDAVEIDINSSIQARE
NVERSRWSDRVKVENYSIQKYIDICQKRYDLIVSNPPFFENASKPVKKARTVARHTDFLSQADLLQAAVKLLSDTGKLAV
IYPVEQAHNFQEKAEYLGLFCQRKLDVKPMPKIPTKRILMELSKKKLPLQKNTLTIEVKQYTYTPEFITLIKDFYLKY

Specific function: Specifically methylates the adenine in position 37 of tRNA(Val)

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. tRNA (adenine-N(6)-)-methyltransferase family

Homologues:

Organism=Escherichia coli, GI87082131, Length=234, Percent_Identity=38.4615384615385, Blast_Score=175, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TRMN6_TRIEI (Q119M4)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_720273.1
- ProteinModelPortal:   Q119M4
- STRING:   Q119M4
- GeneID:   4243140
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_0325
- NMPDR:   fig|203124.1.peg.2486
- eggNOG:   COG4123
- HOGENOM:   HBG307609
- OMA:   FKQFHIN
- PhylomeDB:   Q119M4
- BioCyc:   TERY203124:TERY_0325-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01872
- InterPro:   IPR002052
- InterPro:   IPR002296
- InterPro:   IPR007848
- InterPro:   IPR022882
- PRINTS:   PR00507

Pfam domain/function: PF05175 MTS

EC number: =2.1.1.55

Molecular weight: Translated: 27313; Mature: 27182

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGNQFRFKQFTIRQDRCAMKVGTDGTLLGAWVDVSGAEKILDIGTGTGLIALMLAQRSS
CCCCCEEEEEEEEECCCEEEEECCCCEEEEEEEECCCCHHEEECCCCHHHHHHHHHHCCC
QLKVDIDAVEIDINSSIQARENVERSRWSDRVKVENYSIQKYIDICQKRYDLIVSNPPFF
CEEEEEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCEEECCCCCC
ENASKPVKKARTVARHTDFLSQADLLQAAVKLLSDTGKLAVIYPVEQAHNFQEKAEYLGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCHHHHHHHHHH
FCQRKLDVKPMPKIPTKRILMELSKKKLPLQKNTLTIEVKQYTYTPEFITLIKDFYLKY
HHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECHHHHHHHHHHHHCC
>Mature Secondary Structure 
GGNQFRFKQFTIRQDRCAMKVGTDGTLLGAWVDVSGAEKILDIGTGTGLIALMLAQRSS
CCCCEEEEEEEEECCCEEEEECCCCEEEEEEEECCCCHHEEECCCCHHHHHHHHHHCCC
QLKVDIDAVEIDINSSIQARENVERSRWSDRVKVENYSIQKYIDICQKRYDLIVSNPPFF
CEEEEEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCEEECCCCCC
ENASKPVKKARTVARHTDFLSQADLLQAAVKLLSDTGKLAVIYPVEQAHNFQEKAEYLGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCHHHHHHHHHH
FCQRKLDVKPMPKIPTKRILMELSKKKLPLQKNTLTIEVKQYTYTPEFITLIKDFYLKY
HHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA