| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474182
Identifier: 113474182
GI number: 113474182
Start: 445064
End: 445597
Strand: Direct
Name: 113474182
Synonym: Tery_0290
Alternate gene names: NA
Gene position: 445064-445597 (Clockwise)
Preceding gene: 113474181
Following gene: 113474183
Centisome position: 5.74
GC content: 31.09
Gene sequence:
>534_bases ATGATTGATGAATGTCATATTCTATGGGGAGACATATTAGGTTATGCTTGGGGAAAAACAGATGAAAGAATAGAAATTGC AATTAAAAATGAAAAAGAAAGACAGACTTATTATGGAGCTTTAGACTATAAAACCAAGGAATTTCTTGTGCAAGAATATG AGAGTGGAAATACTAAAAATACTATTGAATTTATTAAATATTTGCAGAAGCAAAGACCGGGCAACAAATTGGCAATATTT TGGGATGGGGCAACTTACCATAACTCTCAAGAATTTCGAGAATATTTAATGACAATTAATCAATACTTATCAGAAGAAGA ATTGTTGATAAATTGTACAAGATTTGCTCCCAATGCTCCGGAGCAAAATCCTGTTGAAGATATTTGGTTACAAACCAAAA ATTTCAGTATTACTTTTTATCATCTTTGCAGTTCTTTTAAAGTAGTTAAGTGGCTATTTAAGTTTTTTGCGGATGGTCAA ATATTCAATTTCCCAAAACTTTTTCAGTATGAAATTTTGCCGCAACCTACTTAG
Upstream 100 bases:
>100_bases TGCTAAAAATGATGAATTAGTAGAAGTTACAAGAAAAGAAATAGAGGAATTTTTAGCTAAATGGCAACCAGAAATAGAAA CTGGAAAGCTTACAGTGTTT
Downstream 100 bases:
>100_bases GATTGCTATAGTTATTTAAATACGATAATTTATTCAATTTTTACATTCACAGCCAAACATTCTAAAAGAGTAGCACGAGC ATAAAAAAAATCGTTTTTTA
Product: transposase
Products: NA
Alternate protein names: Transposase Of
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MIDECHILWGDILGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKNTIEFIKYLQKQRPGNKLAIF WDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAPEQNPVEDIWLQTKNFSITFYHLCSSFKVVKWLFKFFADGQ IFNFPKLFQYEILPQPT
Sequences:
>Translated_177_residues MIDECHILWGDILGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKNTIEFIKYLQKQRPGNKLAIF WDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAPEQNPVEDIWLQTKNFSITFYHLCSSFKVVKWLFKFFADGQ IFNFPKLFQYEILPQPT >Mature_177_residues MIDECHILWGDILGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKNTIEFIKYLQKQRPGNKLAIF WDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAPEQNPVEDIWLQTKNFSITFYHLCSSFKVVKWLFKFFADGQ IFNFPKLFQYEILPQPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21159; Mature: 21159
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDECHILWGDILGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKN CCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHEEEECCCCHHHHHHHHHCCCCCCH TIEFIKYLQKQRPGNKLAIFWDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAP HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCC EQNPVEDIWLQTKNFSITFYHLCSSFKVVKWLFKFFADGQIFNFPKLFQYEILPQPT CCCCHHHHEEECCCCCEEHHHHHCHHHHHHHHHHHHCCCCEECCCCCEEEECCCCCC >Mature Secondary Structure MIDECHILWGDILGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKN CCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHEEEECCCCHHHHHHHHHCCCCCCH TIEFIKYLQKQRPGNKLAIFWDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAP HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCC EQNPVEDIWLQTKNFSITFYHLCSSFKVVKWLFKFFADGQIFNFPKLFQYEILPQPT CCCCHHHHEEECCCCCEEHHHHHCHHHHHHHHHHHHCCCCEECCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA