| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474153
Identifier: 113474153
GI number: 113474153
Start: 401387
End: 401554
Strand: Direct
Name: 113474153
Synonym: Tery_0257
Alternate gene names: NA
Gene position: 401387-401554 (Clockwise)
Preceding gene: 113474151
Following gene: 113474154
Centisome position: 5.18
GC content: 38.69
Gene sequence:
>168_bases ATGGGAAAGACTAAGTCTAAATCTAACTTACCAACAAAAATATGTCCTGTATGTAACCGCCCTTTTAGCTGGCGAAAAAA ATGGGCCAATTGTTGGGATGAAGTGAAATATTGTTCCGAAAGATGTCGGCGACATAAGTCATCTCCGTTATTAGCACCTC CTAATTAA
Upstream 100 bases:
>100_bases AGGGAATAGATTCTATTTATAAATTAATATAAAATTATAAAAATTAAAAATATAATTTTTTAGGTATAATAACTAATAAA TATAGAATAGGTGTGGTACT
Downstream 100 bases:
>100_bases GTAGGAGGAAAGACGCCGAAATTTCCTTTTTTATCTCCTAGAAAAAAACAGGTAGAACTTATTTATTGGTCAAGATTGAC AAAAAAACGAGACTTACTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 55; Mature: 54
Protein sequence:
>55_residues MGKTKSKSNLPTKICPVCNRPFSWRKKWANCWDEVKYCSERCRRHKSSPLLAPPN
Sequences:
>Translated_55_residues MGKTKSKSNLPTKICPVCNRPFSWRKKWANCWDEVKYCSERCRRHKSSPLLAPPN >Mature_54_residues GKTKSKSNLPTKICPVCNRPFSWRKKWANCWDEVKYCSERCRRHKSSPLLAPPN
Specific function: Unknown
COG id: COG4338
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6465; Mature: 6333
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 10.9 %Cys+Met (Translated Protein) 9.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKTKSKSNLPTKICPVCNRPFSWRKKWANCWDEVKYCSERCRRHKSSPLLAPPN CCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GKTKSKSNLPTKICPVCNRPFSWRKKWANCWDEVKYCSERCRRHKSSPLLAPPN CCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA