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The map label for this gene is ygeR [H]

Identifier: 113474151

GI number: 113474151

Start: 397560

End: 398477

Strand: Direct

Name: ygeR [H]

Synonym: Tery_0255

Alternate gene names: 113474151

Gene position: 397560-398477 (Clockwise)

Preceding gene: 113474148

Following gene: 113474153

Centisome position: 5.13

GC content: 35.29

Gene sequence:

>918_bases
ATGATTTATCAATTTTACTTTTGGCTTTTAACTACATTATTATGCTTAATTAATCCACTGTTAGTAATCCAAGTTAATGC
TCAATCTGAAAGGATAAAAATTCCTACTTATTCTATTACACAAGAAGGAAAAGAAGTTTGTCCGCCACCCGCTTTATCTC
GCCTTCAGCGCCATACCATTGCTTCCGGAGAGAGCATTAAAACAATTGCCCAACAGTACAACCTCATTCCCTCAACCTTA
TTAGCATTTAATCGTCTCCTACAGCGAGGACAAGTAACCGTAGGTACTGAAATTATTATTCCCCCCTATAACGGTATCGC
TATAAAAGTACCTGTTGGTAAAACCTGGAAAAATGTTGCAGAAAATTATAATATTCGGGCTGACACTTTATATGAAGTCA
ATGGTTGTCCAGAAACACCAAACCAACAAACACCAGAAATAGTTTTTTTACCAGGGGTAAATTGGTCTCCAGGAGGAAAA
AGACCCCCAGAAATATCTTCATTAACAGGTTATCCTTTACCTTTTGAAGCTAGGGTAATTTTAGGTTATGGTTGGTTGTT
ACATCCAATTAAAAATCGAGTAGTTTTTCATAGTGGTTTAGACTTAATTGCTGATAGTGGAACATCAGTTTTTTCAGTAG
GAGAGGGAACTGTAGCATTTGCCGGGAAACAAAGTAATTATGGAAATTTAGTAGTTATTAATCACGCCTCTGGTAAACAA
ACTCGTTATGCTCATTTAGATTCTATTCAGGTTAAAACTGGTCAAAAAATTCTACAGACAGAACTTTTAGGAACAGTTGG
CCAAACAGGAGAGCCTGATTTTGAAGAAGCTCATCTACATTTTGAAATTAGATATAATTCTCCTTTAGGTTGGGTAGCTG
AAAATCCAAATTCTTATATAAAAGTTATTTTTAAGTAA

Upstream 100 bases:

>100_bases
AAAATCAGGTATACTAAAGAATTGTACTTTTCCATAATACCTCATTTATATTCAAAATCATTTAGGATTACTATAGTATA
TTTATAGAGTTTTATTATCT

Downstream 100 bases:

>100_bases
TTGAAATTAGTATGATCTAAACCGTATTGTTTTATACTAAGTACCGAAGAAAGGGCAGAACAAAATCCTACTTTGGTCAA
AAAAATTGGAAATACCGCCG

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MIYQFYFWLLTTLLCLINPLLVIQVNAQSERIKIPTYSITQEGKEVCPPPALSRLQRHTIASGESIKTIAQQYNLIPSTL
LAFNRLLQRGQVTVGTEIIIPPYNGIAIKVPVGKTWKNVAENYNIRADTLYEVNGCPETPNQQTPEIVFLPGVNWSPGGK
RPPEISSLTGYPLPFEARVILGYGWLLHPIKNRVVFHSGLDLIADSGTSVFSVGEGTVAFAGKQSNYGNLVVINHASGKQ
TRYAHLDSIQVKTGQKILQTELLGTVGQTGEPDFEEAHLHFEIRYNSPLGWVAENPNSYIKVIFK

Sequences:

>Translated_305_residues
MIYQFYFWLLTTLLCLINPLLVIQVNAQSERIKIPTYSITQEGKEVCPPPALSRLQRHTIASGESIKTIAQQYNLIPSTL
LAFNRLLQRGQVTVGTEIIIPPYNGIAIKVPVGKTWKNVAENYNIRADTLYEVNGCPETPNQQTPEIVFLPGVNWSPGGK
RPPEISSLTGYPLPFEARVILGYGWLLHPIKNRVVFHSGLDLIADSGTSVFSVGEGTVAFAGKQSNYGNLVVINHASGKQ
TRYAHLDSIQVKTGQKILQTELLGTVGQTGEPDFEEAHLHFEIRYNSPLGWVAENPNSYIKVIFK
>Mature_305_residues
MIYQFYFWLLTTLLCLINPLLVIQVNAQSERIKIPTYSITQEGKEVCPPPALSRLQRHTIASGESIKTIAQQYNLIPSTL
LAFNRLLQRGQVTVGTEIIIPPYNGIAIKVPVGKTWKNVAENYNIRADTLYEVNGCPETPNQQTPEIVFLPGVNWSPGGK
RPPEISSLTGYPLPFEARVILGYGWLLHPIKNRVVFHSGLDLIADSGTSVFSVGEGTVAFAGKQSNYGNLVVINHASGKQ
TRYAHLDSIQVKTGQKILQTELLGTVGQTGEPDFEEAHLHFEIRYNSPLGWVAENPNSYIKVIFK

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082174, Length=105, Percent_Identity=34.2857142857143, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI87081989, Length=99, Percent_Identity=38.3838383838384, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789099, Length=90, Percent_Identity=33.3333333333333, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 33855; Mature: 33855

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYQFYFWLLTTLLCLINPLLVIQVNAQSERIKIPTYSITQEGKEVCPPPALSRLQRHTI
CEEEEHHHHHHHHHHHCCCEEEEEECCCCCEEECCEEECCCCCHHCCCCHHHHHHHHHHC
ASGESIKTIAQQYNLIPSTLLAFNRLLQRGQVTVGTEIIIPPYNGIAIKVPVGKTWKNVA
CCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCEEEECCCCCEEEEEECCHHHHHHH
ENYNIRADTLYEVNGCPETPNQQTPEIVFLPGVNWSPGGKRPPEISSLTGYPLPFEARVI
HCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
LGYGWLLHPIKNRVVFHSGLDLIADSGTSVFSVGEGTVAFAGKQSNYGNLVVINHASGKQ
EECCHHHHHHHCEEEEECCCEEEECCCCEEEEECCCEEEEECCCCCCCCEEEEECCCCCC
TRYAHLDSIQVKTGQKILQTELLGTVGQTGEPDFEEAHLHFEIRYNSPLGWVAENPNSYI
CEEEECCEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCEEECCCCCEE
KVIFK
EEEEC
>Mature Secondary Structure
MIYQFYFWLLTTLLCLINPLLVIQVNAQSERIKIPTYSITQEGKEVCPPPALSRLQRHTI
CEEEEHHHHHHHHHHHCCCEEEEEECCCCCEEECCEEECCCCCHHCCCCHHHHHHHHHHC
ASGESIKTIAQQYNLIPSTLLAFNRLLQRGQVTVGTEIIIPPYNGIAIKVPVGKTWKNVA
CCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCEEEECCCCCEEEEEECCHHHHHHH
ENYNIRADTLYEVNGCPETPNQQTPEIVFLPGVNWSPGGKRPPEISSLTGYPLPFEARVI
HCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
LGYGWLLHPIKNRVVFHSGLDLIADSGTSVFSVGEGTVAFAGKQSNYGNLVVINHASGKQ
EECCHHHHHHHCEEEEECCCEEEECCCCEEEEECCCEEEEECCCCCCCCEEEEECCCCCC
TRYAHLDSIQVKTGQKILQTELLGTVGQTGEPDFEEAHLHFEIRYNSPLGWVAENPNSYI
CEEEECCEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCEEECCCCCEE
KVIFK
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]