The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474098

Identifier: 113474098

GI number: 113474098

Start: 294991

End: 295656

Strand: Direct

Name: 113474098

Synonym: Tery_0197

Alternate gene names: NA

Gene position: 294991-295656 (Clockwise)

Preceding gene: 113474094

Following gene: 113474100

Centisome position: 3.81

GC content: 34.08

Gene sequence:

>666_bases
ATGACACAAATAACACAGTCCCCAGAACCAATAATTTATCAAGGACAGTTCGGAGATTTTACTATAACTAAAAGCGATCG
CCTTAGTGTAATTATTTATCGTAGTGGCTTAATGATAGCTGCTCTTAGTTTTGCATTAGGCAGTGTCCTAGTATTATGGC
TTGGTGAAAACCCCATCATCATTAAAGCACTTACGCCCATCATTGGCTGTTTTTATCTAGCTAGTGCTGTAAGTTTAACC
ACTATTCATATTTATATGGCCAGCTTACATCGACTACTCCAACTATTTTGGATCATAGGGACTATTACTACAGTAATCTT
AGCAATTAAAAGTAGTGACCCACTTGCATTAACAGTTTACAACAATCCTGTCTCTATTTTCGGTGTAGGTTTTACATTTG
CTGCTTTGACTGGTATTTATTTCAAAGAAGCTTTTTGCTTTAACCGTTTAGAAACTAAATTACTCACACCTTTAGTACCT
TTTTTACTCTTATCTCATTTGGTTGGTTTTTTATCAATTGAAATGAAAGAGTTTTTATTAGGAACTTGGGCTTTCCTATT
TATGATTTTTGCTATCCGAAAGGCATTTCAACCAATACCTCCAGATATTGGGGATAAGACTGTTTTTGAATATTTACATC
AACAAAAAAAATTGGAAAAAAGCTGA

Upstream 100 bases:

>100_bases
ATTAGATTTTGGCATATAATTCTTACCTTATTCAGGTTTATCATTTAAAGAGTATATATATAGAATAAAAAATTCCATTA
ATCTATCTGACGAGTAAACT

Downstream 100 bases:

>100_bases
TCATCCTTAGACAATAGTTAGGGTGGGCAAATATTGCTTAGTTTAACATAATATGTACTACTAAAAAATTGCCCACTATA
CTAATTAAAAAACTTGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MTQITQSPEPIIYQGQFGDFTITKSDRLSVIIYRSGLMIAALSFALGSVLVLWLGENPIIIKALTPIIGCFYLASAVSLT
TIHIYMASLHRLLQLFWIIGTITTVILAIKSSDPLALTVYNNPVSIFGVGFTFAALTGIYFKEAFCFNRLETKLLTPLVP
FLLLSHLVGFLSIEMKEFLLGTWAFLFMIFAIRKAFQPIPPDIGDKTVFEYLHQQKKLEKS

Sequences:

>Translated_221_residues
MTQITQSPEPIIYQGQFGDFTITKSDRLSVIIYRSGLMIAALSFALGSVLVLWLGENPIIIKALTPIIGCFYLASAVSLT
TIHIYMASLHRLLQLFWIIGTITTVILAIKSSDPLALTVYNNPVSIFGVGFTFAALTGIYFKEAFCFNRLETKLLTPLVP
FLLLSHLVGFLSIEMKEFLLGTWAFLFMIFAIRKAFQPIPPDIGDKTVFEYLHQQKKLEKS
>Mature_220_residues
TQITQSPEPIIYQGQFGDFTITKSDRLSVIIYRSGLMIAALSFALGSVLVLWLGENPIIIKALTPIIGCFYLASAVSLTT
IHIYMASLHRLLQLFWIIGTITTVILAIKSSDPLALTVYNNPVSIFGVGFTFAALTGIYFKEAFCFNRLETKLLTPLVPF
LLLSHLVGFLSIEMKEFLLGTWAFLFMIFAIRKAFQPIPPDIGDKTVFEYLHQQKKLEKS

Specific function: Unknown

COG id: COG5413

COG function: function code S; Uncharacterized integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24762; Mature: 24631

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQITQSPEPIIYQGQFGDFTITKSDRLSVIIYRSGLMIAALSFALGSVLVLWLGENPII
CCCCCCCCCCEEEECCCCCEEEECCCCEEEEEEECCHHHHHHHHHHHHHHEEEECCCCEE
IKALTPIIGCFYLASAVSLTTIHIYMASLHRLLQLFWIIGTITTVILAIKSSDPLALTVY
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEE
NNPVSIFGVGFTFAALTGIYFKEAFCFNRLETKLLTPLVPFLLLSHLVGFLSIEMKEFLL
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTWAFLFMIFAIRKAFQPIPPDIGDKTVFEYLHQQKKLEKS
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQITQSPEPIIYQGQFGDFTITKSDRLSVIIYRSGLMIAALSFALGSVLVLWLGENPII
CCCCCCCCCEEEECCCCCEEEECCCCEEEEEEECCHHHHHHHHHHHHHHEEEECCCCEE
IKALTPIIGCFYLASAVSLTTIHIYMASLHRLLQLFWIIGTITTVILAIKSSDPLALTVY
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEE
NNPVSIFGVGFTFAALTGIYFKEAFCFNRLETKLLTPLVPFLLLSHLVGFLSIEMKEFLL
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTWAFLFMIFAIRKAFQPIPPDIGDKTVFEYLHQQKKLEKS
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA